Genes within 1Mb (chr1:46408231:C:T):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000079277 MKNK1 -208612 eQTL 4.84e-03 0.0368 0.013 0.0 0.0 0.333
ENSG00000085999 RAD54L 160543 eQTL 7.21e-04 -0.0696 0.0205 0.00412 0.00333 0.333
ENSG00000086015 MAST2 621244 eQTL 1.30e-03 -0.0661 0.0205 0.0 0.0 0.333
ENSG00000117480 FAAH 13914 eQTL 7.38e-06 -0.099 0.022 0.0 0.0 0.333
ENSG00000142961 MOB3C -208660 eQTL 2.27e-03 0.0601 0.0196 0.0 0.0 0.333
ENSG00000159592 GPBP1L1 720118 eQTL 1.43e-02 -0.0274 0.0112 0.0 0.0 0.333
ENSG00000159658 EFCAB14 -310883 pQTL 4.71e-02 0.0342 0.0172 0.0 0.0 0.323
ENSG00000225447 RPS15AP10 762034 eQTL 1.66e-02 0.0837 0.0349 0.0 0.0 0.333
ENSG00000232022 FAAHP1 -23898 eQTL 5.54e-03 0.0867 0.0312 0.00849 0.00279 0.333
ENSG00000234329 AL604028.2 756405 eQTL 4.25e-02 0.0527 0.0259 0.0 0.0 0.333


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000079277 MKNK1 -208612 1.59e-06 1.53e-06 2.51e-07 1.23e-06 4.83e-07 6.48e-07 1.37e-06 4.01e-07 1.7e-06 7.13e-07 2.02e-06 1.2e-06 2.6e-06 3.95e-07 4.07e-07 1.02e-06 1.08e-06 1.16e-06 5.62e-07 5.9e-07 6.44e-07 1.92e-06 1.46e-06 8.33e-07 2.41e-06 9.28e-07 1.02e-06 8.53e-07 1.64e-06 1.47e-06 8.07e-07 2.83e-07 3.45e-07 6.34e-07 6.12e-07 6.4e-07 7.11e-07 3.5e-07 4.85e-07 2.1e-07 2.58e-07 2.14e-06 3.32e-07 1.3e-07 3.83e-07 3.19e-07 3.01e-07 1.7e-07 2.89e-07
ENSG00000085999 RAD54L 160543 2.7e-06 2.63e-06 3.66e-07 1.86e-06 6.88e-07 8.45e-07 1.87e-06 7.56e-07 1.88e-06 1.04e-06 2.53e-06 1.4e-06 3.23e-06 1.4e-06 9.53e-07 1.62e-06 1.24e-06 2.24e-06 1.42e-06 1.44e-06 1.16e-06 3.02e-06 2.46e-06 1.24e-06 3.59e-06 1.06e-06 1.38e-06 1.67e-06 2.2e-06 2.29e-06 1.82e-06 3.98e-07 5.43e-07 1.25e-06 1.09e-06 9.35e-07 7.18e-07 4.57e-07 1.12e-06 3.54e-07 1.67e-07 3.28e-06 4.58e-07 1.99e-07 3.52e-07 3.46e-07 7.57e-07 2.22e-07 1.56e-07
ENSG00000086015 MAST2 621244 3.14e-07 1.53e-07 6.26e-08 2.05e-07 1.07e-07 8.63e-08 1.99e-07 6.12e-08 1.59e-07 9.35e-08 1.63e-07 1.31e-07 2.05e-07 8e-08 5.36e-08 8.71e-08 4.35e-08 1.8e-07 7.16e-08 5.48e-08 1.18e-07 1.47e-07 1.58e-07 3.51e-08 1.98e-07 1.31e-07 1.19e-07 1.12e-07 1.34e-07 1.24e-07 1.14e-07 4.58e-08 3.38e-08 9.8e-08 3.07e-08 3.18e-08 4.28e-08 8.25e-08 6.41e-08 3.6e-08 5.24e-08 1.59e-07 4.17e-08 1.27e-08 3.29e-08 1.01e-08 8.61e-08 2.02e-09 4.72e-08
ENSG00000117450 \N 885184 2.74e-07 1.19e-07 3.88e-08 1.82e-07 9.25e-08 1e-07 1.44e-07 5.43e-08 1.44e-07 4.74e-08 1.6e-07 8.55e-08 1.41e-07 6.56e-08 6.17e-08 7.3e-08 3.87e-08 1.26e-07 5.39e-08 4e-08 1.08e-07 1.27e-07 1.34e-07 3.49e-08 1.37e-07 1.14e-07 1.06e-07 9.36e-08 1.05e-07 1.07e-07 9.64e-08 3.1e-08 3.35e-08 8.55e-08 8.74e-08 3.62e-08 5.03e-08 9.25e-08 6.78e-08 3.55e-08 4.46e-08 1.35e-07 5.27e-08 3.16e-08 5.7e-08 1.99e-08 1.19e-07 3.83e-09 5.04e-08
ENSG00000117480 FAAH 13914 1.86e-05 2.32e-05 5.25e-06 1.34e-05 5.05e-06 1.23e-05 3.41e-05 3.9e-06 2.27e-05 1.19e-05 2.96e-05 1.23e-05 3.98e-05 1.03e-05 5.99e-06 1.35e-05 1.32e-05 2.02e-05 7.5e-06 6.75e-06 1.25e-05 2.43e-05 2.41e-05 9.31e-06 3.63e-05 6.66e-06 1.02e-05 1e-05 2.69e-05 2.99e-05 1.51e-05 1.64e-06 2.8e-06 7.41e-06 1.04e-05 5.98e-06 3.52e-06 3.11e-06 5.08e-06 3.6e-06 1.77e-06 2.81e-05 2.71e-06 4.49e-07 2.49e-06 3.59e-06 3.77e-06 1.69e-06 1.5e-06
ENSG00000225447 RPS15AP10 762034 2.76e-07 1.3e-07 5.14e-08 1.86e-07 9.8e-08 9.91e-08 1.61e-07 5.66e-08 1.45e-07 5.67e-08 1.55e-07 1.01e-07 1.47e-07 7.13e-08 6.12e-08 7.5e-08 4.01e-08 1.4e-07 5.97e-08 4.3e-08 1.22e-07 1.24e-07 1.45e-07 2.91e-08 1.5e-07 1.25e-07 1.07e-07 9.74e-08 1.16e-07 1e-07 1.02e-07 3.55e-08 3.96e-08 8.23e-08 7.02e-08 2.99e-08 5.22e-08 8.71e-08 6.37e-08 3.87e-08 4.37e-08 1.4e-07 5.21e-08 1.71e-08 4.67e-08 1.87e-08 1.18e-07 1.88e-09 4.8e-08
ENSG00000232022 FAAHP1 -23898 1.37e-05 1.55e-05 3.08e-06 9.71e-06 3.23e-06 7.76e-06 2.24e-05 3.36e-06 1.65e-05 8.35e-06 2.06e-05 8.05e-06 2.89e-05 6.39e-06 5.1e-06 9.71e-06 8.63e-06 1.41e-05 5.39e-06 4.81e-06 8.43e-06 1.58e-05 1.66e-05 6.36e-06 2.73e-05 5.44e-06 7.95e-06 7.68e-06 1.8e-05 1.97e-05 1.14e-05 1.51e-06 1.92e-06 5.42e-06 7.51e-06 4.51e-06 2.56e-06 2.74e-06 3.52e-06 2.69e-06 1.7e-06 1.96e-05 2.47e-06 3.84e-07 1.98e-06 2.83e-06 2.95e-06 1.52e-06 1.24e-06