Genes within 1Mb (chr1:46345871:C:T):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000079277 MKNK1 -270972 eQTL 3.22e-02 0.028 0.0131 0.0 0.0 0.322
ENSG00000085999 RAD54L 98183 eQTL 3.43e-04 -0.0738 0.0205 0.00827 0.00619 0.322
ENSG00000086015 MAST2 558884 eQTL 1.50e-03 -0.0654 0.0205 0.0 0.0 0.322
ENSG00000117480 FAAH -48446 eQTL 1.16e-05 -0.0971 0.022 0.0 0.0 0.322
ENSG00000142961 MOB3C -271020 eQTL 3.10e-03 0.0584 0.0197 0.0 0.0 0.322
ENSG00000159592 GPBP1L1 657758 eQTL 2.44e-02 -0.0252 0.0112 0.0 0.0 0.322
ENSG00000159596 TMEM69 657690 eQTL 3.16e-02 0.0494 0.023 0.0 0.0 0.322
ENSG00000159658 EFCAB14 -373243 pQTL 4.60e-02 0.0345 0.0173 0.0 0.0 0.31
ENSG00000225447 RPS15AP10 699674 eQTL 5.04e-03 0.0981 0.0349 0.0 0.0 0.322
ENSG00000232022 FAAHP1 -86258 eQTL 6.70e-03 0.0849 0.0312 0.0058 0.0019 0.322
ENSG00000234329 AL604028.2 694045 eQTL 4.67e-02 0.0517 0.026 0.0 0.0 0.322


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000085999 RAD54L 98183 4.62e-06 5.05e-06 6.68e-07 2.59e-06 1.33e-06 1.69e-06 4.31e-06 9.91e-07 4.26e-06 1.99e-06 5.02e-06 3.36e-06 7.09e-06 2.49e-06 1.43e-06 2.49e-06 2.06e-06 2.88e-06 1.44e-06 9.15e-07 1.99e-06 4.22e-06 3.54e-06 1.55e-06 5.95e-06 1.32e-06 2.21e-06 1.51e-06 4.26e-06 4.14e-06 2.54e-06 4.91e-07 7.93e-07 1.6e-06 2.09e-06 9.6e-07 9.27e-07 4.75e-07 1.06e-06 3.63e-07 3.62e-07 5.55e-06 5.11e-07 1.64e-07 3.64e-07 3.75e-07 8.3e-07 2.54e-07 1.54e-07
ENSG00000086015 MAST2 558884 3.53e-07 1.76e-07 6.15e-08 2.26e-07 1.03e-07 8.85e-08 2.5e-07 5.89e-08 1.75e-07 9.72e-08 1.96e-07 1.31e-07 2.45e-07 8.66e-08 6.12e-08 9.11e-08 4.25e-08 2.04e-07 7.42e-08 6.03e-08 1.18e-07 1.7e-07 1.69e-07 4.27e-08 2.59e-07 1.31e-07 1.29e-07 1.26e-07 1.37e-07 1.33e-07 1.26e-07 4.32e-08 3.56e-08 1.03e-07 6.25e-08 3.3e-08 5.02e-08 8.57e-08 6.35e-08 4.08e-08 5.65e-08 1.68e-07 4.76e-08 1.77e-08 3.36e-08 8.31e-09 9.96e-08 1.96e-09 4.81e-08
ENSG00000117480 FAAH -48446 7.7e-06 9.23e-06 9.68e-07 4.16e-06 2.13e-06 3.9e-06 9.57e-06 1.5e-06 6.28e-06 4.29e-06 1.04e-05 4.69e-06 1.23e-05 4.03e-06 2.07e-06 5.06e-06 3.8e-06 4.73e-06 2.65e-06 2.13e-06 3.46e-06 7.51e-06 6.76e-06 2.76e-06 1.22e-05 2.38e-06 3.6e-06 2.54e-06 7.34e-06 7.8e-06 4.48e-06 5.85e-07 9.28e-07 2.86e-06 3.31e-06 2.09e-06 1.42e-06 1.42e-06 1.64e-06 9.06e-07 8.85e-07 1.09e-05 6.85e-07 1.92e-07 7.41e-07 1.17e-06 9.61e-07 6.09e-07 4.67e-07
ENSG00000159596 TMEM69 657690 2.91e-07 1.42e-07 5.49e-08 2.05e-07 9.94e-08 8.21e-08 1.81e-07 5.75e-08 1.47e-07 6.08e-08 1.59e-07 1.05e-07 1.79e-07 8.13e-08 5.72e-08 7.74e-08 4.24e-08 1.51e-07 6.92e-08 4.92e-08 1.25e-07 1.25e-07 1.58e-07 2.68e-08 1.85e-07 1.26e-07 1.12e-07 1.04e-07 1.24e-07 1e-07 1.07e-07 3.03e-08 3.43e-08 9.78e-08 3.02e-08 2.95e-08 5.58e-08 8.61e-08 6.71e-08 3.86e-08 5e-08 1.52e-07 5.2e-08 1.13e-08 3.4e-08 1.77e-08 1.19e-07 1.88e-09 5.04e-08
ENSG00000225447 RPS15AP10 699674 2.8e-07 1.35e-07 5.14e-08 1.97e-07 1.03e-07 9.05e-08 1.67e-07 5.43e-08 1.45e-07 5.67e-08 1.63e-07 9.19e-08 1.59e-07 7.64e-08 6.25e-08 7.5e-08 4.01e-08 1.4e-07 6.32e-08 4.78e-08 1.22e-07 1.24e-07 1.44e-07 2.79e-08 1.68e-07 1.21e-07 1.13e-07 9.74e-08 1.2e-07 1.05e-07 1.06e-07 3.1e-08 3.96e-08 8.89e-08 3.46e-08 3.14e-08 5.61e-08 9.23e-08 6.86e-08 3.87e-08 5.13e-08 1.46e-07 5.21e-08 7.21e-09 3.84e-08 1.87e-08 1.19e-07 3.79e-09 4.9e-08
ENSG00000232022 FAAHP1 -86258 4.7e-06 5.13e-06 7.85e-07 3.14e-06 1.66e-06 1.56e-06 5.25e-06 9.79e-07 5.16e-06 2.43e-06 5.73e-06 3.43e-06 7.67e-06 1.97e-06 1.33e-06 3.05e-06 1.87e-06 3.51e-06 1.55e-06 9.64e-07 2.77e-06 4.77e-06 4.56e-06 1.48e-06 7.65e-06 1.62e-06 2.62e-06 1.69e-06 4.36e-06 4.67e-06 2.77e-06 5.76e-07 4.91e-07 1.69e-06 2.04e-06 1.18e-06 9.73e-07 4.24e-07 8.68e-07 4.26e-07 4.32e-07 6.44e-06 3.96e-07 1.65e-07 4.33e-07 6.92e-07 7.44e-07 3.19e-07 1.76e-07