Genes within 1Mb (chr1:46259632:T:C):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000070759 TESK2 768469 eQTL 1.00e-02 0.188 0.073 0.0 0.0 0.0103
ENSG00000085998 POMGNT1 39327 eQTL 3.74e-02 0.107 0.0515 0.0 0.0 0.0103
ENSG00000117448 AKR1A1 709089 eQTL 1.24e-02 -0.138 0.0552 0.0 0.0 0.0103
ENSG00000117450 PRDX1 736585 pQTL 3.32e-02 0.178 0.0834 0.0 0.0 0.0101
ENSG00000117480 FAAH -134685 eQTL 1.79e-12 0.725 0.101 0.00311 0.00325 0.0103
ENSG00000117481 NSUN4 -80545 eQTL 1.16e-47 1.64 0.107 0.0 0.0 0.0103
ENSG00000132773 TOE1 919580 eQTL 4.01e-02 -0.133 0.0649 0.0 0.0 0.0103
ENSG00000142961 MOB3C -357259 eQTL 4.70e-02 -0.184 0.0924 0.0 0.0 0.0103
ENSG00000159588 CCDC17 635575 eQTL 2.00e-05 -0.296 0.069 0.0 0.0 0.0103
ENSG00000173660 UQCRH -44066 eQTL 4.27e-02 -0.0979 0.0483 0.0 0.0 0.0103
ENSG00000186603 HPDL 932727 eQTL 3.23e-02 0.285 0.133 0.00116 0.0 0.0103
ENSG00000225447 RPS15AP10 613435 eQTL 2.19e-02 -0.376 0.164 0.0 0.0 0.0103


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000070759 TESK2 768469 2.91e-07 1.33e-07 5.82e-08 1.97e-07 1.03e-07 8.33e-08 1.81e-07 5.85e-08 1.44e-07 6.75e-08 1.59e-07 1.2e-07 1.95e-07 7.95e-08 5.94e-08 7.89e-08 4.31e-08 1.56e-07 6.92e-08 4.95e-08 1.25e-07 1.39e-07 1.58e-07 3.22e-08 1.72e-07 1.26e-07 1.17e-07 1.06e-07 1.31e-07 1.05e-07 1.07e-07 3.39e-08 3.59e-08 9.3e-08 3.52e-08 2.69e-08 5.8e-08 8.63e-08 6.76e-08 3.6e-08 5.33e-08 1.46e-07 5.24e-08 1.49e-08 3.81e-08 1.77e-08 1e-07 1.89e-09 4.8e-08
ENSG00000117448 AKR1A1 709089 3.07e-07 1.53e-07 6.26e-08 2.07e-07 1.02e-07 8.33e-08 2.1e-07 5.68e-08 1.71e-07 8.53e-08 1.61e-07 1.31e-07 2.24e-07 8e-08 5.69e-08 9.01e-08 4.45e-08 1.77e-07 7.09e-08 5.35e-08 1.22e-07 1.56e-07 1.58e-07 3.42e-08 2.02e-07 1.31e-07 1.2e-07 1.1e-07 1.32e-07 1.05e-07 1.14e-07 3.72e-08 3.29e-08 9.8e-08 3.12e-08 2.79e-08 5.35e-08 8.89e-08 6.39e-08 5.13e-08 5.87e-08 1.59e-07 5.22e-08 1.2e-08 2.64e-08 1.68e-08 8.46e-08 1.93e-09 4.83e-08
ENSG00000117480 FAAH -134685 4e-06 3.84e-06 6.52e-07 2.02e-06 1.12e-06 8.89e-07 2.77e-06 9.8e-07 3.03e-06 1.67e-06 3.62e-06 2.56e-06 6.37e-06 1.3e-06 1.06e-06 2.42e-06 1.82e-06 2.34e-06 1.46e-06 9.53e-07 1.9e-06 3.94e-06 3.45e-06 1.63e-06 4.79e-06 1.33e-06 1.87e-06 1.44e-06 4e-06 3.38e-06 2e-06 5.26e-07 7.93e-07 1.82e-06 1.73e-06 8.53e-07 9.14e-07 4.37e-07 1.05e-06 4e-07 4.48e-07 4.47e-06 5.42e-07 1.87e-07 3.43e-07 3.54e-07 6.64e-07 2.4e-07 3.21e-07
ENSG00000117481 NSUN4 -80545 5.72e-06 6.14e-06 7.59e-07 3.51e-06 1.84e-06 1.92e-06 8.67e-06 1.28e-06 4.75e-06 3.31e-06 7.76e-06 2.98e-06 1.01e-05 2.19e-06 1.05e-06 4.64e-06 2.94e-06 3.77e-06 1.93e-06 2.07e-06 3.08e-06 6.81e-06 5.2e-06 2.3e-06 9.17e-06 2.41e-06 3.05e-06 1.75e-06 6.75e-06 7.35e-06 3.25e-06 5.72e-07 7.05e-07 2.67e-06 1.97e-06 1.84e-06 1.35e-06 6.96e-07 1.32e-06 8.28e-07 1.02e-06 8.58e-06 6.74e-07 1.75e-07 6.99e-07 8.98e-07 9.45e-07 6.58e-07 5.98e-07
ENSG00000159588 CCDC17 635575 3.53e-07 1.67e-07 6.86e-08 2.24e-07 1.08e-07 8.4e-08 2.63e-07 6.2e-08 1.94e-07 1.11e-07 1.96e-07 1.57e-07 2.94e-07 8.44e-08 6.6e-08 1.01e-07 5.57e-08 2.15e-07 7.42e-08 6.29e-08 1.23e-07 1.89e-07 1.75e-07 3.27e-08 2.48e-07 1.65e-07 1.25e-07 1.36e-07 1.36e-07 1.39e-07 1.27e-07 4.77e-08 4.23e-08 1.02e-07 5.24e-08 3.3e-08 4.54e-08 7.49e-08 5.84e-08 6.55e-08 4.58e-08 1.62e-07 3.55e-08 1.1e-08 3.48e-08 6.39e-09 7.12e-08 2.07e-09 4.67e-08
ENSG00000159596 \N 571451 4.37e-07 2.4e-07 7.45e-08 2.43e-07 1.05e-07 1.19e-07 3.33e-07 7.46e-08 2.35e-07 1.37e-07 2.62e-07 2.04e-07 3.95e-07 8.26e-08 9.12e-08 1.26e-07 8.64e-08 2.75e-07 8.68e-08 8.31e-08 1.33e-07 2.24e-07 2.04e-07 5.11e-08 3.27e-07 1.9e-07 1.48e-07 1.54e-07 1.6e-07 2e-07 1.59e-07 5.4e-08 4.87e-08 1.01e-07 8.75e-08 4.95e-08 5.45e-08 6.78e-08 4.74e-08 8.34e-08 3.6e-08 2.5e-07 3.53e-08 1.08e-08 4.99e-08 9.86e-09 9.26e-08 0.0 4.47e-08