Genes within 1Mb (chr1:46137676:T:G):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000070759 TESK2 646513 eQTL 2.82e-15 -0.125 0.0156 0.0 0.0 0.293
ENSG00000086015 MAST2 350689 eQTL 1.20e-19 0.188 0.0203 0.0 0.0 0.293
ENSG00000117448 AKR1A1 587133 eQTL 3.32e-03 -0.0356 0.0121 0.0 0.0 0.293
ENSG00000117461 PIK3R3 4640 eQTL 1.06e-24 0.217 0.0206 0.0 0.0 0.293
ENSG00000117480 FAAH -256641 eQTL 4.84e-02 0.045 0.0228 0.0 0.0 0.293
ENSG00000132128 LRRC41 -165932 eQTL 2.27e-02 -0.042 0.0184 0.00107 0.0 0.293
ENSG00000132780 NASP 553830 eQTL 4.88e-02 -0.0342 0.0173 0.0 0.0 0.293
ENSG00000142961 MOB3C -479215 eQTL 1.56e-03 -0.0641 0.0202 0.0 0.0 0.293
ENSG00000159592 GPBP1L1 449563 eQTL 5.92e-05 0.0461 0.0114 0.00164 0.0013 0.293
ENSG00000159596 TMEM69 449495 eQTL 6.13e-03 0.0647 0.0236 0.0 0.0 0.293
ENSG00000159658 EFCAB14 -581438 pQTL 2.21e-02 -0.0398 0.0174 0.0 0.0 0.287
ENSG00000159658 EFCAB14 -581438 eQTL 3.25e-02 -0.0439 0.0205 0.0 0.0 0.293
ENSG00000162415 ZSWIM5 831467 eQTL 5.89e-02 0.0426 0.0225 0.0012 0.0 0.293
ENSG00000197429 IPP 387026 eQTL 1.25e-03 0.0704 0.0217 0.0 0.0 0.293
ENSG00000225447 RPS15AP10 491479 eQTL 2.52e-12 -0.249 0.0351 0.0 0.0 0.293
ENSG00000234329 AL604028.2 485850 eQTL 2.12e-21 -0.248 0.0255 0.0 0.0 0.293
ENSG00000280670 CCDC163 637597 eQTL 1.76e-03 -0.125 0.0398 0.00161 0.0 0.293


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000070759 TESK2 646513 3.53e-07 1.92e-07 5.91e-08 2.62e-07 9.82e-08 1.08e-07 2.74e-07 5.82e-08 1.85e-07 9.35e-08 2.07e-07 1.46e-07 4.05e-07 8.66e-08 1.01e-07 8.08e-08 5.42e-08 1.77e-07 7.39e-08 7.49e-08 1.25e-07 1.7e-07 1.75e-07 3.49e-08 2.48e-07 1.39e-07 1.31e-07 1.47e-07 1.39e-07 1.85e-07 1.35e-07 3.84e-08 4.37e-08 9.5e-08 1.22e-07 3.22e-08 5.76e-08 8.89e-08 5.69e-08 7.9e-08 5.09e-08 2.41e-07 4.7e-08 1.43e-08 3.41e-08 9.44e-09 1.2e-07 1.9e-09 4.94e-08
ENSG00000086015 MAST2 350689 1.27e-06 9.48e-07 1.2e-07 7.39e-07 1.18e-07 3.69e-07 8.73e-07 2.04e-07 8.29e-07 3.22e-07 1.26e-06 5.51e-07 1.99e-06 2.54e-07 4.19e-07 3.35e-07 7.62e-07 4.16e-07 2.87e-07 6.11e-07 2.01e-07 5.71e-07 5.82e-07 2.65e-07 1.69e-06 2.53e-07 5.05e-07 4.77e-07 6.84e-07 1.04e-06 5.1e-07 6.37e-08 1.05e-07 2.35e-07 4.17e-07 1.19e-07 3.14e-07 1.09e-07 1.44e-07 6.46e-08 1.79e-07 1.53e-06 5.58e-08 5.87e-09 1.14e-07 4.53e-08 8.84e-08 3.35e-09 4.74e-08
ENSG00000117448 AKR1A1 587133 4.37e-07 2.67e-07 6.55e-08 3.57e-07 1.05e-07 1.26e-07 3.33e-07 5.84e-08 1.96e-07 1.11e-07 2.84e-07 1.72e-07 5.39e-07 8.85e-08 1.45e-07 9.48e-08 8.42e-08 2.15e-07 7.27e-08 8.11e-08 1.22e-07 1.98e-07 2e-07 4.17e-08 3.41e-07 1.65e-07 1.39e-07 1.54e-07 1.48e-07 2.52e-07 1.76e-07 4.69e-08 4.86e-08 9.9e-08 1.95e-07 2.68e-08 6.77e-08 8.17e-08 4.99e-08 7.39e-08 3.24e-08 2.91e-07 3.4e-08 7.26e-09 3.32e-08 8.07e-09 8.81e-08 1.96e-09 5.04e-08
ENSG00000117461 PIK3R3 4640 3.49e-05 3.18e-05 5.66e-06 1.51e-05 5.6e-06 1.37e-05 4.4e-05 4.28e-06 2.93e-05 1.42e-05 3.61e-05 1.63e-05 4.65e-05 1.33e-05 6.69e-06 1.67e-05 1.69e-05 2.39e-05 7.47e-06 6.54e-06 1.4e-05 3.08e-05 3.09e-05 8.57e-06 4.2e-05 7.55e-06 1.25e-05 1.19e-05 3.09e-05 2.47e-05 1.87e-05 1.63e-06 2.5e-06 6.67e-06 1.1e-05 5.23e-06 2.85e-06 3.12e-06 4.43e-06 3.15e-06 1.72e-06 3.71e-05 3.46e-06 3.18e-07 2.3e-06 3.51e-06 3.85e-06 1.47e-06 1.46e-06
ENSG00000132128 LRRC41 -165932 2.77e-06 3.13e-06 2.19e-07 2.02e-06 4.48e-07 8.24e-07 2.16e-06 4.95e-07 1.86e-06 7.42e-07 2.48e-06 1.31e-06 6.3e-06 1.36e-06 8.99e-07 1.1e-06 1.28e-06 1.55e-06 5.56e-07 1.33e-06 6.67e-07 2.67e-06 2.32e-06 9.82e-07 3.92e-06 1.17e-06 1.22e-06 1.39e-06 1.95e-06 2.2e-06 2e-06 2.62e-07 4e-07 1.22e-06 1.56e-06 5.32e-07 8.1e-07 3.58e-07 1.18e-06 3.57e-07 3.58e-07 4.1e-06 4.42e-07 1.41e-07 3.24e-07 3.47e-07 2.43e-07 5.32e-08 1.08e-07
ENSG00000142961 MOB3C -479215 7.76e-07 5.67e-07 7.92e-08 4.4e-07 1.11e-07 1.97e-07 5.2e-07 8.37e-08 3.17e-07 1.7e-07 5.93e-07 3.21e-07 9.57e-07 1.23e-07 3e-07 1.46e-07 2.25e-07 3.02e-07 1.36e-07 1.78e-07 1.33e-07 2.86e-07 3.07e-07 7.36e-08 6.87e-07 2.2e-07 2.24e-07 2.24e-07 2.76e-07 5.82e-07 2.83e-07 6.04e-08 5.38e-08 1.19e-07 3.48e-07 4.95e-08 1.09e-07 5.8e-08 6.29e-08 2.77e-08 8.15e-08 6.11e-07 2.89e-08 1.74e-08 4.91e-08 1.88e-08 7.8e-08 0.0 4.83e-08
ENSG00000159592 GPBP1L1 449563 8.35e-07 6.42e-07 8.51e-08 4.1e-07 1.05e-07 2.24e-07 5.65e-07 9.69e-08 3.94e-07 2.06e-07 7.67e-07 3.61e-07 1.03e-06 1.6e-07 3.31e-07 1.75e-07 3.24e-07 3.39e-07 1.62e-07 1.91e-07 1.35e-07 3.34e-07 3.45e-07 1.13e-07 8.33e-07 2.46e-07 2.56e-07 2.7e-07 3.58e-07 6.81e-07 3.38e-07 8.14e-08 5.6e-08 1.39e-07 3.71e-07 5.14e-08 8.52e-08 6.1e-08 6.49e-08 1.56e-08 9.7e-08 7.52e-07 1.6e-08 1.85e-08 5.84e-08 1.27e-08 9.26e-08 0.0 4.94e-08
ENSG00000159658 EFCAB14 -581438 4.37e-07 2.67e-07 6.42e-08 3.58e-07 1.05e-07 1.26e-07 3.42e-07 6.2e-08 2.01e-07 1.11e-07 2.98e-07 1.82e-07 5.54e-07 8.85e-08 1.48e-07 9.48e-08 8.42e-08 2.21e-07 7.11e-08 8.25e-08 1.22e-07 1.98e-07 2.04e-07 4.17e-08 3.41e-07 1.71e-07 1.39e-07 1.61e-07 1.48e-07 2.59e-07 1.76e-07 4.77e-08 4.86e-08 9.81e-08 2.15e-07 2.74e-08 6.87e-08 7.61e-08 4.72e-08 7.5e-08 3.27e-08 3.06e-07 3.19e-08 7.28e-09 3.55e-08 8.24e-09 8.81e-08 1.96e-09 5.02e-08
ENSG00000162415 ZSWIM5 831467 2.8e-07 1.33e-07 4.69e-08 2.26e-07 9.24e-08 8.33e-08 1.73e-07 5.48e-08 1.45e-07 5.67e-08 1.73e-07 1.05e-07 2.13e-07 7.95e-08 5.69e-08 7.36e-08 4.24e-08 1.33e-07 6.07e-08 5.35e-08 1.08e-07 1.24e-07 1.5e-07 3.03e-08 1.65e-07 1.25e-07 1.18e-07 1.04e-07 1.23e-07 1.07e-07 1.07e-07 3.06e-08 4.02e-08 8.72e-08 3.57e-08 3.62e-08 5.51e-08 9.36e-08 6.67e-08 5.24e-08 5.48e-08 1.52e-07 5.21e-08 1.27e-08 4.92e-08 1.8e-08 1.19e-07 3.81e-09 4.73e-08
ENSG00000197429 IPP 387026 1.21e-06 8.97e-07 1e-07 4.4e-07 9.29e-08 3.26e-07 6.87e-07 1.54e-07 6.52e-07 2.82e-07 1.09e-06 5.01e-07 1.53e-06 2.1e-07 4.55e-07 2.55e-07 5.64e-07 4.11e-07 2.6e-07 4.06e-07 1.8e-07 4.99e-07 4.66e-07 1.78e-07 1.39e-06 2.71e-07 4.34e-07 3.78e-07 5.41e-07 9.11e-07 4.47e-07 6.13e-08 5.37e-08 1.79e-07 3.4e-07 7.56e-08 1.91e-07 8.33e-08 1.01e-07 9.5e-09 1.15e-07 1.19e-06 4.18e-08 1.07e-08 9.64e-08 3.87e-08 9.83e-08 2.94e-09 4.61e-08
ENSG00000225447 RPS15AP10 491479 7.3e-07 4.97e-07 7.6e-08 4.32e-07 1.05e-07 1.77e-07 4.93e-07 7.98e-08 2.81e-07 1.6e-07 5.29e-07 2.98e-07 9.23e-07 1.1e-07 2.77e-07 1.33e-07 2.07e-07 2.93e-07 1.13e-07 1.71e-07 1.33e-07 2.63e-07 3.02e-07 6.52e-08 6.39e-07 2.13e-07 2.23e-07 2.18e-07 2.57e-07 5.36e-07 2.54e-07 5.38e-08 5.55e-08 1.17e-07 3.3e-07 4.77e-08 1.18e-07 5.92e-08 4.44e-08 2.65e-08 6.39e-08 5.79e-07 3.09e-08 1.7e-08 4.06e-08 1.81e-08 7.13e-08 2.23e-09 4.82e-08
ENSG00000234329 AL604028.2 485850 7.57e-07 5.33e-07 7.76e-08 4.34e-07 1.05e-07 1.85e-07 5.01e-07 8.17e-08 3.03e-07 1.65e-07 5.73e-07 3.08e-07 9.37e-07 1.17e-07 2.86e-07 1.39e-07 2.11e-07 2.96e-07 1.27e-07 1.67e-07 1.33e-07 2.7e-07 3.03e-07 7.22e-08 6.59e-07 2.13e-07 2.22e-07 2.19e-07 2.66e-07 5.56e-07 2.6e-07 5.46e-08 6.08e-08 1.19e-07 3.31e-07 4.86e-08 1.08e-07 5.71e-08 4.55e-08 2.68e-08 7.96e-08 6.15e-07 3.14e-08 1.72e-08 4.36e-08 1.84e-08 7.52e-08 0.0 4.82e-08
ENSG00000280670 CCDC163 637597 3.62e-07 2.17e-07 5.91e-08 2.66e-07 9.82e-08 1.13e-07 2.74e-07 5.82e-08 1.86e-07 9.72e-08 2.18e-07 1.48e-07 4.11e-07 8.54e-08 1.07e-07 8.71e-08 5.57e-08 1.8e-07 7.39e-08 7.26e-08 1.25e-07 1.7e-07 1.73e-07 3.58e-08 2.59e-07 1.43e-07 1.25e-07 1.47e-07 1.37e-07 1.89e-07 1.39e-07 3.9e-08 4.23e-08 9.72e-08 1.29e-07 3.07e-08 5.54e-08 8.37e-08 5.27e-08 8.03e-08 4.73e-08 2.43e-07 4.76e-08 1.43e-08 3.2e-08 9.65e-09 1.15e-07 1.91e-09 4.9e-08