logo

Genes within 1Mb (chr1:45937166:G:A):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000070759 TESK2 446003 sc-eQTL 8.32e-01 0.0503 0.237 0.052 PB L2
ENSG00000070785 EIF2B3 950444 sc-eQTL 1.31e-01 -0.304 0.2 0.052 PB L2
ENSG00000079277 MKNK1 -679677 sc-eQTL 3.35e-03 0.742 0.248 0.052 PB L2
ENSG00000085998 POMGNT1 -283139 sc-eQTL 7.59e-01 -0.0748 0.243 0.052 PB L2
ENSG00000086015 MAST2 150179 sc-eQTL 4.86e-01 -0.176 0.252 0.052 PB L2
ENSG00000117448 AKR1A1 386623 sc-eQTL 7.62e-01 -0.0396 0.131 0.052 PB L2
ENSG00000117450 PRDX1 414119 sc-eQTL 3.46e-01 0.111 0.118 0.052 PB L2
ENSG00000117481 NSUN4 -403011 sc-eQTL 6.28e-01 -0.135 0.278 0.052 PB L2
ENSG00000123472 ATPAF1 -736701 sc-eQTL 3.68e-01 0.156 0.172 0.052 PB L2
ENSG00000126088 UROD 926216 sc-eQTL 3.33e-01 -0.171 0.176 0.052 PB L2
ENSG00000126107 HECTD3 925842 sc-eQTL 4.67e-01 -0.142 0.195 0.052 PB L2
ENSG00000132128 LRRC41 -366442 sc-eQTL 1.95e-01 -0.287 0.22 0.052 PB L2
ENSG00000132773 TOE1 597114 sc-eQTL 3.24e-01 -0.247 0.25 0.052 PB L2
ENSG00000132780 NASP 353320 sc-eQTL 8.64e-01 0.045 0.262 0.052 PB L2
ENSG00000132781 MUTYH 596273 sc-eQTL 6.50e-01 0.125 0.274 0.052 PB L2
ENSG00000142961 MOB3C -679725 sc-eQTL 4.01e-01 -0.195 0.232 0.052 PB L2
ENSG00000159592 GPBP1L1 249053 sc-eQTL 2.41e-01 0.318 0.27 0.052 PB L2
ENSG00000159596 TMEM69 248985 sc-eQTL 2.50e-01 0.261 0.225 0.052 PB L2
ENSG00000159658 EFCAB14 -781948 sc-eQTL 5.90e-01 -0.121 0.224 0.052 PB L2
ENSG00000173660 UQCRH -366532 sc-eQTL 5.53e-01 0.0813 0.137 0.052 PB L2
ENSG00000197429 IPP 186513 sc-eQTL 5.80e-01 -0.142 0.257 0.052 PB L2
ENSG00000280670 CCDC163 437087 sc-eQTL 1.16e-01 -0.318 0.201 0.052 PB L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000086015 MAST2 150179 eQTL 0.000301 0.175 0.0483 0.102 0.0 0.0486
ENSG00000117461 PIK3R3 -195870 eQTL 0.0209 0.115 0.0497 0.0 0.0 0.0486
ENSG00000117480 FAAH -457151 eQTL 0.0207 0.121 0.0522 0.0 0.0 0.0486
ENSG00000142961 MOB3C -679725 eQTL 0.0172 -0.111 0.0464 0.0 0.0 0.0486
ENSG00000234329 AL604028.2 285340 eQTL 0.0153 -0.148 0.0611 0.0 0.0 0.0486

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000162415 \N 630957 4.21e-07 2.5e-07 7.16e-08 2.48e-07 1.09e-07 1.25e-07 3.57e-07 6.72e-08 2.12e-07 1.37e-07 2.98e-07 2.04e-07 3.77e-07 8.55e-08 9.2e-08 1.1e-07 8.53e-08 2.43e-07 9.69e-08 7.54e-08 1.35e-07 2.07e-07 2.04e-07 4.91e-08 3.7e-07 1.76e-07 1.48e-07 1.68e-07 1.54e-07 2.26e-07 1.71e-07 6.68e-08 5.09e-08 9.81e-08 1.29e-07 4.77e-08 6.39e-08 6.2e-08 5.7e-08 7.65e-08 4.78e-08 2.43e-07 3.31e-08 2.09e-08 8.06e-08 8.76e-09 9.26e-08 2.94e-09 4.55e-08