Genes within 1Mb (chr1:45827776:T:C):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000070759 TESK2 336613 eQTL 4.89e-02 -0.104 0.0526 0.0 0.0 0.0201
ENSG00000070785 EIF2B3 841054 eQTL 4.07e-02 -0.121 0.0591 0.00112 0.0 0.0201
ENSG00000079277 MKNK1 -789067 eQTL 4.36e-02 0.0889 0.044 0.0 0.0 0.0201
ENSG00000117461 PIK3R3 -305260 eQTL 4.85e-02 0.141 0.0711 0.0 0.0 0.0201
ENSG00000126088 UROD 816826 pQTL 4.65e-02 -0.101 0.0504 0.0 0.0 0.0213
ENSG00000126088 UROD 816826 eQTL 3.89e-04 -0.259 0.0729 0.0 0.0 0.0201
ENSG00000159658 EFCAB14 -891338 eQTL 8.61e-03 0.177 0.0671 0.0 0.0 0.0201
ENSG00000173660 UQCRH -475922 eQTL 4.51e-02 0.0696 0.0347 0.0 0.0 0.0201


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000070759 TESK2 336613 1.25e-06 8.81e-07 1.54e-07 3.15e-07 9.93e-08 3.41e-07 8.39e-07 2.64e-07 8.29e-07 2.98e-07 1.13e-06 5.45e-07 1.34e-06 2.1e-07 3.86e-07 4.29e-07 7.22e-07 5.12e-07 2.87e-07 2.86e-07 2.53e-07 5.86e-07 6.04e-07 3.59e-07 1.69e-06 2.41e-07 4.83e-07 4.06e-07 7.07e-07 9.25e-07 4.61e-07 5.45e-08 1.05e-07 2.72e-07 3.27e-07 2.56e-07 1.86e-07 1.23e-07 1.23e-07 8.36e-09 1.67e-07 1.09e-06 5.78e-08 1.21e-08 1.92e-07 2.71e-08 1.68e-07 4.41e-08 6.32e-08
ENSG00000117461 PIK3R3 -305260 1.29e-06 9.34e-07 2.62e-07 4.4e-07 1.56e-07 3.69e-07 1.13e-06 3.49e-07 1.14e-06 3.64e-07 1.35e-06 5.6e-07 1.59e-06 2.5e-07 4.49e-07 6e-07 7.7e-07 5.48e-07 3.84e-07 4.38e-07 3.24e-07 9.64e-07 7.52e-07 5.53e-07 1.93e-06 2.8e-07 6.03e-07 4.96e-07 9.4e-07 1.08e-06 5.3e-07 4.44e-08 1.7e-07 4.04e-07 4.25e-07 3.16e-07 3.1e-07 1.36e-07 1.71e-07 9.61e-09 2.44e-07 1.43e-06 6.81e-08 1.93e-08 1.89e-07 4.53e-08 1.85e-07 8.41e-08 4.9e-08
ENSG00000126088 UROD 816826 2.76e-07 1.3e-07 4.47e-08 1.82e-07 9.16e-08 9.8e-08 1.61e-07 5.43e-08 1.45e-07 5.42e-08 1.55e-07 8.68e-08 1.53e-07 6.76e-08 6.04e-08 7.36e-08 4.09e-08 1.27e-07 5.39e-08 4.16e-08 1.19e-07 1.27e-07 1.45e-07 3.03e-08 1.55e-07 1.14e-07 1.07e-07 9.61e-08 1.16e-07 1.07e-07 1.02e-07 3.65e-08 3.66e-08 8e-08 6.67e-08 3.49e-08 5.08e-08 9.26e-08 6.59e-08 3.87e-08 5.43e-08 1.33e-07 5.08e-08 1.32e-08 5.15e-08 1.83e-08 1.19e-07 3.78e-09 4.9e-08
ENSG00000159658 EFCAB14 -891338 2.74e-07 1.25e-07 3.69e-08 1.82e-07 9.01e-08 9.65e-08 1.49e-07 5.37e-08 1.44e-07 4.74e-08 1.62e-07 8.59e-08 1.45e-07 6.56e-08 5.99e-08 7.3e-08 3.87e-08 1.26e-07 5.36e-08 4.45e-08 1.08e-07 1.27e-07 1.44e-07 3.49e-08 1.46e-07 1.16e-07 1.06e-07 9.57e-08 1.09e-07 1.07e-07 9.7e-08 4.09e-08 3.35e-08 8.44e-08 7.66e-08 3.95e-08 5.01e-08 9.22e-08 6.54e-08 3.37e-08 4.36e-08 1.33e-07 4.52e-08 1.81e-08 5.75e-08 1.83e-08 1.21e-07 3.83e-09 4.79e-08
ENSG00000186603 \N 500871 6.09e-07 3.12e-07 7.45e-08 2.79e-07 1.03e-07 1.28e-07 4.05e-07 7.79e-08 2.53e-07 1.46e-07 3.47e-07 2.09e-07 4.74e-07 8.55e-08 9.33e-08 1.33e-07 1.18e-07 2.9e-07 8e-08 7.49e-08 1.52e-07 2.3e-07 2.67e-07 7.36e-08 4.54e-07 1.86e-07 1.57e-07 1.7e-07 2.03e-07 2.52e-07 1.88e-07 5.08e-08 4.96e-08 1.23e-07 1.69e-07 5.23e-08 5.71e-08 5.92e-08 5.7e-08 8.34e-08 2.81e-08 2.9e-07 3.4e-08 1.54e-08 5.32e-08 1.03e-08 9.34e-08 0.0 4.61e-08