Genes within 1Mb (chr1:45783761:C:G):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000086015 MAST2 -3226 eQTL 1.70e-18 0.374 0.0417 0.0 0.0 0.0505
ENSG00000117425 PTCH2 940508 eQTL 8.19e-03 0.138 0.052 0.00122 0.0 0.0505
ENSG00000117448 AKR1A1 233218 eQTL 1.48e-02 -0.0605 0.0248 0.0 0.0 0.0505
ENSG00000117461 PIK3R3 -349275 eQTL 2.53e-02 -0.0996 0.0444 0.0 0.0 0.0505
ENSG00000126088 UROD 772811 pQTL 4.52e-04 0.117 0.0331 0.0 0.0 0.0484
ENSG00000126088 UROD 772811 eQTL 6.99e-03 0.123 0.0457 0.0 0.0 0.0505
ENSG00000132773 TOE1 443709 eQTL 2.06e-02 -0.0676 0.0292 0.0 0.0 0.0505
ENSG00000132780 NASP 199915 eQTL 3.97e-11 -0.232 0.0348 0.00399 0.00396 0.0505
ENSG00000159588 CCDC17 159704 eQTL 1.46e-22 -0.299 0.0298 0.0 0.0 0.0505
ENSG00000159592 GPBP1L1 95648 eQTL 7.19e-03 0.0633 0.0235 0.0 0.0 0.0505
ENSG00000162415 ZSWIM5 477552 eQTL 2.74e-02 -0.102 0.0462 0.0 0.0 0.0505
ENSG00000197429 IPP 33111 eQTL 2.78e-02 -0.0984 0.0447 0.0 0.0 0.0505
ENSG00000222009 BTBD19 975279 eQTL 1.45e-04 -0.123 0.0322 0.0 0.0 0.0505
ENSG00000232022 FAAHP1 -648368 eQTL 6.50e-03 -0.179 0.0657 0.0 0.0 0.0505
ENSG00000234329 AL604028.2 131935 eQTL 4.63e-03 -0.155 0.0545 0.0 0.0 0.0505
ENSG00000281912 LINC01144 479851 eQTL 1.49e-03 0.235 0.0738 0.0 0.0 0.0505


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000086015 MAST2 -3226 2.99e-05 3.04e-05 6.99e-06 1.67e-05 7.07e-06 1.68e-05 5.03e-05 5.56e-06 3.31e-05 1.58e-05 3.92e-05 1.87e-05 5.42e-05 1.54e-05 7.94e-06 2.12e-05 1.98e-05 2.86e-05 1.07e-05 1.03e-05 1.97e-05 3.46e-05 3.3e-05 1.43e-05 4.97e-05 9.53e-06 1.61e-05 1.31e-05 3.57e-05 5.35e-05 2.16e-05 3.18e-06 5.11e-06 9.81e-06 1.43e-05 8.9e-06 4.88e-06 5.01e-06 7.12e-06 4.72e-06 2.16e-06 3.81e-05 4.23e-06 6.17e-07 3.31e-06 5.28e-06 4.65e-06 2.5e-06 1.91e-06
ENSG00000117425 PTCH2 940508 2.76e-07 1.27e-07 5.49e-08 1.9e-07 1.03e-07 9.05e-08 1.6e-07 5.43e-08 1.45e-07 6.08e-08 1.52e-07 1.05e-07 1.53e-07 7.37e-08 6.25e-08 7.5e-08 4.01e-08 1.44e-07 6.75e-08 4.92e-08 1.26e-07 1.26e-07 1.44e-07 2.87e-08 1.55e-07 1.25e-07 1.13e-07 1.01e-07 1.23e-07 1e-07 1.02e-07 3.93e-08 3.73e-08 8.89e-08 3.46e-08 3.14e-08 5.3e-08 8.68e-08 6.57e-08 3.75e-08 5.33e-08 1.4e-07 5.24e-08 1.61e-08 2.64e-08 1.8e-08 1.2e-07 1.91e-09 4.99e-08
ENSG00000117448 AKR1A1 233218 1.57e-06 1.91e-06 2.75e-07 1.3e-06 4.93e-07 6.45e-07 1.26e-06 4.05e-07 1.71e-06 7.2e-07 1.89e-06 1.29e-06 2.63e-06 5.79e-07 3.41e-07 9.88e-07 1.06e-06 1.21e-06 5.4e-07 6.52e-07 6.02e-07 1.95e-06 1.58e-06 8.41e-07 2.43e-06 9.19e-07 9.86e-07 1.07e-06 1.75e-06 1.48e-06 7.35e-07 2.82e-07 3.74e-07 7.25e-07 8.35e-07 5.92e-07 6.89e-07 3.26e-07 4.85e-07 2.17e-07 2.74e-07 2.21e-06 3.37e-07 1.31e-07 3.98e-07 3.22e-07 3.78e-07 2.49e-07 2.91e-07
ENSG00000126088 UROD 772811 3.07e-07 1.53e-07 6.41e-08 2.24e-07 1.07e-07 8.63e-08 2.1e-07 5.82e-08 1.59e-07 9.35e-08 1.61e-07 1.31e-07 2.13e-07 8e-08 5.69e-08 8.08e-08 4.45e-08 1.8e-07 7.29e-08 6.03e-08 1.18e-07 1.47e-07 1.58e-07 3.59e-08 2.02e-07 1.31e-07 1.22e-07 1.17e-07 1.32e-07 1.1e-07 1.14e-07 4.77e-08 3.65e-08 9.08e-08 4.78e-08 3.05e-08 3.91e-08 7.63e-08 6.62e-08 6.19e-08 4.53e-08 1.59e-07 3.99e-08 7.43e-09 4e-08 6.53e-09 7.92e-08 2.13e-09 4.98e-08
ENSG00000132780 NASP 199915 2.14e-06 2.61e-06 3.09e-07 1.7e-06 4.63e-07 7.89e-07 1.52e-06 5.91e-07 1.7e-06 8.16e-07 2.05e-06 1.29e-06 3.5e-06 1.16e-06 6.04e-07 1.19e-06 9.55e-07 1.89e-06 7.88e-07 1.15e-06 9.48e-07 2.35e-06 2.02e-06 1.03e-06 2.87e-06 1.2e-06 1.17e-06 1.45e-06 1.8e-06 1.8e-06 1.21e-06 3.02e-07 5.19e-07 1.25e-06 1.01e-06 8.84e-07 8.1e-07 4.24e-07 9.59e-07 3.75e-07 1.51e-07 2.87e-06 3.78e-07 1.75e-07 2.74e-07 3.15e-07 5.32e-07 2.25e-07 2.1e-07
ENSG00000159588 CCDC17 159704 3.59e-06 3.22e-06 5.96e-07 1.94e-06 8.52e-07 8.07e-07 2.48e-06 8.83e-07 2.33e-06 1.41e-06 3.13e-06 1.79e-06 4.84e-06 1.28e-06 9.1e-07 2.08e-06 1.52e-06 2.17e-06 1.49e-06 1.2e-06 1.64e-06 3.37e-06 3.28e-06 1.8e-06 4.11e-06 1.28e-06 1.55e-06 1.72e-06 3.52e-06 2.94e-06 1.99e-06 4.53e-07 7.33e-07 1.65e-06 1.68e-06 9.53e-07 8.9e-07 4.49e-07 1.31e-06 3.64e-07 3.2e-07 3.93e-06 6.49e-07 1.89e-07 3.69e-07 3.33e-07 8.55e-07 2.07e-07 1.63e-07
ENSG00000159592 GPBP1L1 95648 5.07e-06 5.26e-06 6.63e-07 3.45e-06 1.54e-06 1.54e-06 6.99e-06 1.15e-06 5.05e-06 2.82e-06 6.67e-06 3.22e-06 8.47e-06 1.79e-06 1.02e-06 3.9e-06 2.2e-06 3.87e-06 1.5e-06 1.47e-06 2.77e-06 5.15e-06 4.68e-06 1.86e-06 8.16e-06 2.1e-06 2.22e-06 1.74e-06 5.34e-06 6.17e-06 2.69e-06 4.16e-07 7.77e-07 2.31e-06 2.05e-06 1.35e-06 1.03e-06 5.14e-07 9.19e-07 7.28e-07 8.05e-07 7.03e-06 4.73e-07 1.53e-07 7.99e-07 1.08e-06 1.17e-06 6.72e-07 5.73e-07
ENSG00000173660 \N -519937 7.74e-07 4.24e-07 1.02e-07 3.43e-07 9.33e-08 1.74e-07 4.68e-07 1.11e-07 3.32e-07 2.16e-07 4.88e-07 3.36e-07 6.08e-07 1.1e-07 1.71e-07 1.96e-07 2.25e-07 3.67e-07 1.93e-07 1.43e-07 1.92e-07 3.13e-07 3.07e-07 1.36e-07 6.02e-07 2.36e-07 2.57e-07 2.57e-07 3e-07 4.27e-07 2.31e-07 5.62e-08 5.19e-08 1.39e-07 3e-07 7.98e-08 1.14e-07 7.93e-08 4.37e-08 2.53e-08 9.77e-08 3.85e-07 2.75e-08 1.73e-08 1.47e-07 1.27e-08 8.24e-08 1.2e-08 5.43e-08
ENSG00000222009 BTBD19 975279 2.67e-07 1.3e-07 5.03e-08 1.83e-07 9.87e-08 9.48e-08 1.61e-07 5.53e-08 1.45e-07 5.67e-08 1.55e-07 1.01e-07 1.52e-07 7.13e-08 6.18e-08 7.49e-08 4.09e-08 1.4e-07 6.32e-08 4.89e-08 1.22e-07 1.24e-07 1.45e-07 2.79e-08 1.5e-07 1.21e-07 1.1e-07 9.92e-08 1.2e-07 1.07e-07 9.92e-08 3.54e-08 4.02e-08 8.56e-08 4.92e-08 3.28e-08 5.59e-08 8.63e-08 6.86e-08 4.19e-08 5.44e-08 1.33e-07 5.21e-08 1.16e-08 3.2e-08 1.92e-08 1.2e-07 1.89e-09 5e-08
ENSG00000234329 AL604028.2 131935 4.25e-06 4.65e-06 7.85e-07 2.41e-06 1.35e-06 1.19e-06 3.23e-06 9.54e-07 3.65e-06 2.01e-06 4.16e-06 3.21e-06 6.98e-06 2.04e-06 1.44e-06 2.54e-06 1.99e-06 2.78e-06 1.37e-06 1.01e-06 2.67e-06 4.27e-06 3.38e-06 1.56e-06 4.84e-06 1.33e-06 2.25e-06 1.81e-06 4.32e-06 4.13e-06 1.93e-06 5.76e-07 5.51e-07 1.79e-06 2.1e-06 9.6e-07 9.24e-07 5.28e-07 1.04e-06 4.28e-07 5.19e-07 4.81e-06 3.78e-07 1.78e-07 5.79e-07 5.51e-07 8.07e-07 3.79e-07 3.41e-07
ENSG00000281912 LINC01144 479851 8.48e-07 5.6e-07 1.31e-07 3.96e-07 1.05e-07 2.16e-07 5.54e-07 1.55e-07 4.3e-07 2.57e-07 6.88e-07 3.91e-07 7.93e-07 1.49e-07 2.44e-07 2.36e-07 3.35e-07 4.11e-07 2.6e-07 1.8e-07 2.3e-07 3.8e-07 3.69e-07 1.94e-07 7.72e-07 2.49e-07 3.04e-07 2.69e-07 3.99e-07 5.82e-07 2.93e-07 5.77e-08 5.55e-08 1.64e-07 3.52e-07 1.28e-07 1.02e-07 1.08e-07 6.81e-08 2.2e-08 1.01e-07 5.09e-07 4.24e-08 1.88e-08 1.94e-07 1.48e-08 1.17e-07 2.35e-08 6.06e-08