Genes within 1Mb (chr1:45763401:G:A):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000070759 TESK2 272238 eQTL 2.55e-11 0.148 0.022 0.0 0.0 0.12
ENSG00000079277 MKNK1 -853442 eQTL 1.07e-03 0.0615 0.0187 0.0 0.0 0.12
ENSG00000085998 POMGNT1 -456904 eQTL 1.92e-02 0.0371 0.0158 0.0 0.0 0.12
ENSG00000086015 MAST2 -23586 eQTL 3.64e-04 -0.106 0.0295 0.0 0.0 0.12
ENSG00000117450 PRDX1 240354 eQTL 7.04e-04 -0.0588 0.0173 0.0 0.0 0.12
ENSG00000117461 PIK3R3 -369635 eQTL 2.57e-05 -0.128 0.0302 0.0 0.0 0.12
ENSG00000117481 NSUN4 -576776 eQTL 1.87e-04 0.137 0.0364 0.0 0.0 0.12
ENSG00000123472 ATPAF1 -910466 eQTL 3.47e-02 0.0618 0.0292 0.0 0.0 0.12
ENSG00000126088 UROD 752451 pQTL 1.72e-04 -0.0832 0.0221 0.0 0.0 0.116
ENSG00000126088 UROD 752451 eQTL 4.53e-02 -0.0627 0.0313 0.0 0.0 0.12
ENSG00000142961 MOB3C -853490 eQTL 2.03e-02 0.0659 0.0284 0.0 0.0 0.12
ENSG00000159588 CCDC17 139344 eQTL 5.89e-05 -0.0857 0.0212 0.0 0.0 0.12
ENSG00000159596 TMEM69 75220 eQTL 2.45e-19 -0.292 0.0317 0.0 0.0 0.12
ENSG00000173846 PLK3 963024 eQTL 5.49e-03 -0.0476 0.0171 0.0 0.0 0.12
ENSG00000225447 RPS15AP10 117204 eQTL 6.42e-05 0.201 0.05 0.0 0.0 0.12
ENSG00000234093 RPS15AP11 982686 eQTL 1.34e-02 -0.13 0.0524 0.0 0.0 0.12
ENSG00000234329 AL604028.2 111575 eQTL 3.12e-16 0.301 0.0362 0.0 0.0 0.12


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000070759 TESK2 272238 1.37e-06 1.3e-06 2.29e-07 1.32e-06 3.45e-07 6.25e-07 1.48e-06 3.98e-07 1.5e-06 5.99e-07 1.99e-06 8.32e-07 2.49e-06 3.07e-07 5.03e-07 9.51e-07 9.36e-07 9.45e-07 7.81e-07 6.36e-07 7.95e-07 1.92e-06 1.11e-06 5.57e-07 2.35e-06 7.38e-07 9.77e-07 8.53e-07 1.62e-06 1.27e-06 8e-07 1.72e-07 2.45e-07 6.21e-07 5.67e-07 4.6e-07 7.3e-07 2.46e-07 5.01e-07 3.02e-07 2.68e-07 1.91e-06 1.93e-07 1.32e-07 2.16e-07 1.85e-07 2.33e-07 3.7e-08 1.58e-07
ENSG00000079277 MKNK1 -853442 2.8e-07 1.33e-07 5.72e-08 2.05e-07 9.79e-08 9.05e-08 1.73e-07 5.48e-08 1.47e-07 6.08e-08 1.63e-07 1.01e-07 1.71e-07 7.64e-08 5.98e-08 7.74e-08 4.18e-08 1.44e-07 6.75e-08 4.3e-08 1.26e-07 1.26e-07 1.58e-07 2.79e-08 1.68e-07 1.22e-07 1.18e-07 9.92e-08 1.22e-07 1e-07 1.06e-07 3.68e-08 3.96e-08 8.72e-08 3.81e-08 2.99e-08 5.7e-08 8.63e-08 6.43e-08 3.92e-08 5.03e-08 1.46e-07 5.08e-08 1.43e-08 3.42e-08 1.77e-08 1.2e-07 1.89e-09 5e-08
ENSG00000117450 PRDX1 240354 1.61e-06 2.05e-06 2.16e-07 1.3e-06 3.86e-07 6.45e-07 1.25e-06 4.2e-07 1.7e-06 7.11e-07 1.89e-06 1.18e-06 2.68e-06 5.72e-07 3.66e-07 9.79e-07 1.1e-06 1.16e-06 5.38e-07 4.63e-07 7.54e-07 1.96e-06 1.59e-06 6.41e-07 2.63e-06 8.55e-07 1.05e-06 8.57e-07 1.75e-06 1.47e-06 7.63e-07 2.58e-07 2.96e-07 5.72e-07 7.57e-07 5.06e-07 7.24e-07 3.65e-07 5.07e-07 2.8e-07 2.71e-07 2.46e-06 3.37e-07 1.74e-07 3.14e-07 2.74e-07 2.59e-07 1.05e-07 1.92e-07
ENSG00000117481 NSUN4 -576776 5.59e-07 3.23e-07 8.51e-08 2.96e-07 1.02e-07 1.44e-07 3.7e-07 7.56e-08 2.53e-07 1.39e-07 3.25e-07 1.96e-07 4.74e-07 9.15e-08 1.12e-07 1.46e-07 1.18e-07 2.87e-07 1.13e-07 8.31e-08 1.52e-07 2.48e-07 2.56e-07 6.65e-08 4.54e-07 2.01e-07 1.78e-07 1.61e-07 2.03e-07 2.59e-07 1.78e-07 4.58e-08 4.87e-08 1.17e-07 1.76e-07 5.14e-08 6.87e-08 6e-08 4.72e-08 8.06e-08 4.46e-08 2.9e-07 2.94e-08 1.98e-08 6.21e-08 9.12e-09 9.19e-08 0.0 4.59e-08
ENSG00000126088 UROD 752451 3.07e-07 1.56e-07 6.41e-08 2.24e-07 1.03e-07 8.37e-08 2.1e-07 5.85e-08 1.59e-07 7.6e-08 1.61e-07 1.19e-07 2.24e-07 8e-08 5.36e-08 8.71e-08 4.35e-08 1.72e-07 7.16e-08 5.07e-08 1.22e-07 1.56e-07 1.64e-07 3.49e-08 2.17e-07 1.31e-07 1.2e-07 1.04e-07 1.32e-07 1.17e-07 1.09e-07 3.03e-08 3.68e-08 9.78e-08 4.04e-08 2.79e-08 4.28e-08 8.2e-08 6.39e-08 3.6e-08 5.33e-08 1.59e-07 4.83e-08 1.14e-08 3.07e-08 1.19e-08 8.61e-08 1.96e-09 4.83e-08
ENSG00000132781 \N 422931 1.17e-06 8.23e-07 1.59e-07 4.01e-07 1.12e-07 3.24e-07 6.52e-07 1.62e-07 6.52e-07 2.98e-07 1.03e-06 4.62e-07 1.07e-06 1.76e-07 3.35e-07 3.57e-07 5.63e-07 4.31e-07 2.92e-07 1.86e-07 2.61e-07 5.36e-07 4.69e-07 2.7e-07 1.39e-06 2.64e-07 4.55e-07 3.24e-07 5.56e-07 8.38e-07 3.81e-07 5.69e-08 5.71e-08 1.88e-07 3.46e-07 1.54e-07 1.44e-07 1.06e-07 7.41e-08 2.8e-08 1.03e-07 8.03e-07 5.91e-08 1.94e-08 1.67e-07 3.87e-08 1.11e-07 2.41e-08 6.17e-08
ENSG00000159588 CCDC17 139344 4.36e-06 4.67e-06 6.52e-07 2.14e-06 9.03e-07 1.19e-06 3.15e-06 1.02e-06 3.25e-06 1.73e-06 4.2e-06 2.72e-06 6.77e-06 1.96e-06 1.3e-06 2.42e-06 2.06e-06 2.75e-06 1.37e-06 9.54e-07 2.02e-06 4.27e-06 3.42e-06 1.78e-06 5.16e-06 1.28e-06 1.82e-06 1.44e-06 4.15e-06 3.94e-06 2.04e-06 4.17e-07 7.09e-07 1.76e-06 1.94e-06 9.24e-07 9.55e-07 4.37e-07 1.34e-06 3.28e-07 2.08e-07 5.27e-06 3.78e-07 1.68e-07 3.63e-07 3.22e-07 6.93e-07 2.62e-07 1.76e-07
ENSG00000159596 TMEM69 75220 6.87e-06 9.04e-06 8.44e-07 3.85e-06 1.74e-06 2.71e-06 9.41e-06 1.22e-06 5.32e-06 3.49e-06 8.86e-06 3.69e-06 1.13e-05 3.5e-06 1.52e-06 4.63e-06 3.75e-06 3.89e-06 2.23e-06 1.92e-06 3.16e-06 7.51e-06 5.83e-06 1.96e-06 1.12e-05 2.32e-06 3.39e-06 2.1e-06 6.95e-06 7.69e-06 3.94e-06 4.74e-07 8.41e-07 2.62e-06 2.56e-06 1.71e-06 1.24e-06 6.96e-07 1.38e-06 7.55e-07 7.41e-07 9.18e-06 8.57e-07 1.62e-07 7.12e-07 8.07e-07 1.07e-06 6.85e-07 5.88e-07
ENSG00000173846 PLK3 963024 2.74e-07 1.27e-07 4.98e-08 1.9e-07 9.16e-08 9.76e-08 1.61e-07 5.37e-08 1.45e-07 4.94e-08 1.54e-07 8.55e-08 1.52e-07 6.76e-08 6.04e-08 7.36e-08 4.09e-08 1.27e-07 5.97e-08 4.1e-08 1.19e-07 1.24e-07 1.45e-07 2.95e-08 1.5e-07 1.21e-07 1.07e-07 9.65e-08 1.16e-07 1.07e-07 9.92e-08 4.09e-08 3.56e-08 8.25e-08 6.34e-08 3.49e-08 5.31e-08 9.23e-08 6.37e-08 4.02e-08 5.14e-08 1.33e-07 5.2e-08 1.11e-08 4.92e-08 1.84e-08 1.22e-07 3.79e-09 4.9e-08
ENSG00000234329 AL604028.2 111575 4.92e-06 5.24e-06 8.15e-07 3.1e-06 1.53e-06 1.64e-06 5.37e-06 9.96e-07 5.08e-06 2.41e-06 5.68e-06 3.38e-06 7.51e-06 1.97e-06 1.31e-06 3.71e-06 1.93e-06 3.43e-06 1.55e-06 1.09e-06 2.9e-06 4.9e-06 4.56e-06 1.42e-06 7.98e-06 1.87e-06 2.49e-06 1.73e-06 4.41e-06 4.8e-06 2.89e-06 5.76e-07 6.31e-07 1.49e-06 2.09e-06 9.89e-07 9.44e-07 4.24e-07 9.46e-07 4.28e-07 4.53e-07 6.63e-06 3.65e-07 1.55e-07 4.38e-07 7.78e-07 9.47e-07 3.35e-07 3.25e-07