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Genes within 1Mb (chr1:45739868:T:C):

View on , UCSC , GTEx , gnomAD

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000070759 TESK2 248705 eQTL 1.58e-24 0.15 0.0143 0.0 0.0 0.361
ENSG00000079277 MKNK1 -876975 eQTL 3.10e-03 0.0374 0.0126 0.0 0.0 0.361
ENSG00000086015 MAST2 -47119 eQTL 1.85e-07 -0.103 0.0197 0.0 0.0 0.361
ENSG00000117461 PIK3R3 -393168 eQTL 2.66e-23 -0.198 0.0194 0.0 0.0 0.361
ENSG00000117481 NSUN4 -600309 eQTL 8.76e-04 0.0818 0.0245 0.0 0.0 0.361
ENSG00000123472 ATPAF1 -933999 eQTL 7.42e-03 0.0526 0.0196 0.0 0.0 0.361
ENSG00000126088 UROD 728918 pQTL 3.31e-02 0.0312 0.0146 0.0 0.0 0.353
ENSG00000126088 UROD 728918 eQTL 3.36e-02 0.0447 0.021 0.0 0.0 0.361
ENSG00000142961 MOB3C -877023 eQTL 1.22e-03 0.0617 0.019 0.0 0.0 0.361
ENSG00000159588 CCDC17 115811 eQTL 2.25e-16 -0.116 0.0139 0.00279 0.00256 0.361
ENSG00000159592 GPBP1L1 51755 eQTL 1.39e-02 -0.0266 0.0108 0.0 0.0 0.361
ENSG00000159596 TMEM69 51687 eQTL 6.53e-15 -0.171 0.0215 0.0 0.0 0.361
ENSG00000159658 EFCAB14 -979246 pQTL 1.64e-04 0.0613 0.0162 0.00259 0.00274 0.353
ENSG00000162415 ZSWIM5 433659 eQTL 3.25e-02 -0.0454 0.0212 0.0 0.0 0.361
ENSG00000197429 IPP -10782 eQTL 7.78e-04 -0.069 0.0205 0.0 0.0 0.361
ENSG00000225447 RPS15AP10 93671 eQTL 9.64e-14 0.249 0.0329 0.0 0.0 0.361
ENSG00000230896 AL604028.1 42793 eQTL 2.76e-02 -0.0843 0.0382 0.0 0.0 0.361
ENSG00000234329 AL604028.2 88042 eQTL 3.98e-33 0.291 0.0233 0.0 0.0 0.361
ENSG00000269956 MKNK1-AS1 -798828 eQTL 3.61e-02 0.049 0.0233 0.0 0.0 0.361
ENSG00000280670 CCDC163 239789 eQTL 9.16e-05 0.147 0.0373 0.0 0.0 0.361

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina