Genes within 1Mb (chr1:45734573:T:C):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000086015 MAST2 -52414 eQTL 6.19e-20 0.384 0.041 0.00931 0.00959 0.0515
ENSG00000117425 PTCH2 891320 eQTL 9.82e-03 0.133 0.0513 0.00108 0.0 0.0515
ENSG00000117448 AKR1A1 184030 eQTL 1.79e-02 -0.058 0.0245 0.0 0.0 0.0515
ENSG00000117461 PIK3R3 -398463 eQTL 3.30e-02 -0.0937 0.0439 0.0 0.0 0.0515
ENSG00000126088 UROD 723623 pQTL 1.52e-04 0.123 0.0324 0.0 0.0 0.0506
ENSG00000126088 UROD 723623 eQTL 6.74e-03 0.122 0.0451 0.0 0.0 0.0515
ENSG00000132773 TOE1 394521 eQTL 1.85e-02 -0.0679 0.0288 0.0 0.0 0.0515
ENSG00000132780 NASP 150727 eQTL 2.11e-11 -0.233 0.0343 0.00698 0.00721 0.0515
ENSG00000159588 CCDC17 110516 eQTL 1.05e-24 -0.309 0.0292 0.0 0.0 0.0515
ENSG00000159592 GPBP1L1 46460 eQTL 5.26e-03 0.0649 0.0232 0.0 0.0 0.0515
ENSG00000162415 ZSWIM5 428364 eQTL 3.44e-02 -0.0966 0.0456 0.0 0.0 0.0515
ENSG00000197429 IPP -16077 eQTL 1.07e-02 -0.113 0.0441 0.0 0.0 0.0515
ENSG00000222009 BTBD19 926091 eQTL 9.35e-05 -0.125 0.0318 0.0 0.0 0.0515
ENSG00000225447 RPS15AP10 88376 eQTL 3.56e-02 -0.153 0.0726 0.0 0.0 0.0515
ENSG00000232022 FAAHP1 -697556 eQTL 4.75e-03 -0.184 0.0648 0.00127 0.0 0.0515
ENSG00000234329 AL604028.2 82747 eQTL 1.25e-03 -0.174 0.0538 0.0 0.0 0.0515
ENSG00000281912 LINC01144 430663 eQTL 4.12e-04 0.258 0.0728 0.0 0.0 0.0515


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000086015 MAST2 -52414 1.01e-05 1.24e-05 1.25e-06 6.18e-06 2.42e-06 4.35e-06 1.19e-05 2.15e-06 1.02e-05 5.36e-06 1.41e-05 5.73e-06 1.8e-05 4.02e-06 3.62e-06 6.63e-06 5.45e-06 7.71e-06 2.83e-06 2.82e-06 5.7e-06 1.07e-05 9.64e-06 3.38e-06 1.72e-05 4.51e-06 5.21e-06 4.83e-06 1.14e-05 8.64e-06 6.76e-06 9.52e-07 1.1e-06 3e-06 4.73e-06 2.51e-06 1.73e-06 1.94e-06 2.15e-06 9.53e-07 1.02e-06 1.4e-05 1.47e-06 1.61e-07 7.78e-07 1.75e-06 1.4e-06 7.99e-07 4.82e-07
ENSG00000117425 PTCH2 891320 2.67e-07 1.34e-07 4.48e-08 1.9e-07 9.24e-08 9.9e-08 1.61e-07 5.37e-08 1.45e-07 5.67e-08 1.52e-07 1.01e-07 1.53e-07 7.37e-08 6.25e-08 7.36e-08 4.09e-08 1.33e-07 5.97e-08 4.31e-08 1.21e-07 1.24e-07 1.45e-07 3.23e-08 1.55e-07 1.25e-07 1.07e-07 1.01e-07 1.2e-07 1.02e-07 1.06e-07 3.39e-08 3.68e-08 8.11e-08 6.67e-08 3.53e-08 5.74e-08 8.71e-08 6.59e-08 3.82e-08 5.65e-08 1.46e-07 5.2e-08 1.1e-08 3.83e-08 1.92e-08 1.19e-07 1.95e-09 4.81e-08
ENSG00000117448 AKR1A1 184030 3.06e-06 3.17e-06 2.71e-07 2.05e-06 4.71e-07 7.85e-07 2.12e-06 6.43e-07 2.28e-06 1.06e-06 3.02e-06 1.49e-06 3.96e-06 1.41e-06 8.95e-07 1.62e-06 1.46e-06 2.29e-06 9.43e-07 1.22e-06 1.15e-06 3.2e-06 2.59e-06 9.56e-07 4.02e-06 1.21e-06 1.26e-06 1.77e-06 2.54e-06 1.9e-06 2e-06 3.22e-07 5.79e-07 1.24e-06 1.31e-06 8.58e-07 7.91e-07 4.03e-07 9.3e-07 3.52e-07 1.51e-07 4.11e-06 4.98e-07 1.89e-07 3.3e-07 3.33e-07 5.32e-07 2.29e-07 2.46e-07
ENSG00000126088 UROD 723623 3.07e-07 1.56e-07 5.72e-08 2.26e-07 1.03e-07 8.33e-08 1.99e-07 5.66e-08 1.54e-07 8.53e-08 1.66e-07 1.31e-07 2.24e-07 8.07e-08 5.97e-08 7.89e-08 4.31e-08 1.72e-07 7.18e-08 5.46e-08 1.22e-07 1.56e-07 1.64e-07 2.68e-08 2.02e-07 1.31e-07 1.17e-07 1.28e-07 1.32e-07 1.05e-07 1.26e-07 4.77e-08 4.27e-08 9.76e-08 3.71e-08 2.74e-08 5.1e-08 8.25e-08 6.41e-08 6.07e-08 5.03e-08 1.6e-07 4.7e-08 7.32e-09 3.55e-08 6.39e-09 8.81e-08 0.0 4.97e-08
ENSG00000132780 NASP 150727 4.32e-06 4.67e-06 5.15e-07 1.87e-06 8.58e-07 9.68e-07 2.92e-06 1.01e-06 3.47e-06 1.7e-06 4.21e-06 2.72e-06 6.55e-06 1.9e-06 1.42e-06 2.07e-06 1.79e-06 2.26e-06 1.48e-06 1.18e-06 1.96e-06 4.13e-06 3.53e-06 1.68e-06 4.89e-06 1.29e-06 1.79e-06 1.55e-06 3.87e-06 2.87e-06 1.98e-06 4.71e-07 7.94e-07 1.36e-06 1.88e-06 8.93e-07 9.24e-07 4.52e-07 1.23e-06 3.46e-07 2.22e-07 4.86e-06 4.6e-07 1.74e-07 3.45e-07 3.23e-07 9e-07 2.07e-07 1.58e-07
ENSG00000159588 CCDC17 110516 5.17e-06 5.93e-06 8.35e-07 3.29e-06 1.52e-06 1.56e-06 6.46e-06 1.11e-06 4.83e-06 2.91e-06 7.51e-06 3.2e-06 8.81e-06 1.79e-06 9.37e-07 3.73e-06 2.01e-06 3.82e-06 1.55e-06 1.17e-06 2.79e-06 5.49e-06 4.74e-06 1.4e-06 8.46e-06 2.01e-06 2.29e-06 1.78e-06 4.66e-06 4.3e-06 2.63e-06 5.58e-07 7.21e-07 1.48e-06 1.96e-06 9.71e-07 1e-06 4.56e-07 9.42e-07 3.88e-07 4.69e-07 7.37e-06 4.19e-07 1.54e-07 5.79e-07 1.14e-06 1.01e-06 5.05e-07 3.26e-07
ENSG00000159592 GPBP1L1 46460 1.11e-05 1.27e-05 1.59e-06 6.7e-06 2.34e-06 5.16e-06 1.38e-05 2.15e-06 1.07e-05 5.52e-06 1.59e-05 6.14e-06 2.01e-05 4.25e-06 3.97e-06 6.87e-06 6.45e-06 8.19e-06 2.97e-06 2.82e-06 6.38e-06 1.18e-05 1.04e-05 3.31e-06 1.98e-05 4.48e-06 6.2e-06 5.13e-06 1.29e-05 9.59e-06 7.65e-06 1.05e-06 1.22e-06 3.36e-06 4.96e-06 2.63e-06 1.85e-06 1.95e-06 2.19e-06 9.86e-07 9.94e-07 1.57e-05 1.61e-06 1.92e-07 8.27e-07 1.96e-06 1.74e-06 6.68e-07 4.52e-07
ENSG00000173660 \N -569125 5.14e-07 3.12e-07 6.72e-08 2.58e-07 1.03e-07 1.28e-07 3.42e-07 6.57e-08 2.35e-07 1.46e-07 3.25e-07 2.11e-07 4.27e-07 9.15e-08 1.18e-07 1.14e-07 8.53e-08 2.83e-07 8.93e-08 8.1e-08 1.39e-07 2.3e-07 2.26e-07 3.41e-08 3.7e-07 1.94e-07 1.37e-07 1.86e-07 1.98e-07 1.81e-07 1.93e-07 8.25e-08 5.38e-08 9.61e-08 1.22e-07 5.04e-08 8.87e-08 5.8e-08 4.99e-08 7.89e-08 5.56e-08 2.8e-07 3.31e-08 1.84e-08 6.59e-08 9.31e-09 9.26e-08 3.2e-09 5.61e-08
ENSG00000222009 BTBD19 926091 2.67e-07 1.27e-07 4.08e-08 1.82e-07 9.25e-08 9.76e-08 1.53e-07 5.2e-08 1.45e-07 5.42e-08 1.55e-07 9.19e-08 1.52e-07 7.13e-08 6.18e-08 7.53e-08 4.17e-08 1.27e-07 5.75e-08 4.23e-08 1.21e-07 1.24e-07 1.45e-07 3.49e-08 1.5e-07 1.21e-07 1.07e-07 9.92e-08 1.16e-07 1.07e-07 1.02e-07 3.03e-08 3.51e-08 8.25e-08 7.36e-08 3.65e-08 5.8e-08 8.93e-08 6.55e-08 4.55e-08 5.05e-08 1.4e-07 5.22e-08 7.39e-09 4.25e-08 1.87e-08 1.22e-07 1.92e-09 4.8e-08
ENSG00000234329 AL604028.2 82747 6.95e-06 9.33e-06 7.05e-07 3.98e-06 1.83e-06 2.58e-06 9.6e-06 1.34e-06 6.17e-06 4.1e-06 1.02e-05 4.03e-06 1.14e-05 3.68e-06 2e-06 4.71e-06 3.7e-06 3.84e-06 2.15e-06 1.92e-06 3.37e-06 7.71e-06 5.85e-06 2.01e-06 1.11e-05 2.45e-06 3.56e-06 2.81e-06 7.04e-06 7.05e-06 4.3e-06 4.86e-07 8e-07 2.27e-06 2.56e-06 1.35e-06 1.12e-06 9.43e-07 1.2e-06 7.17e-07 7.64e-07 9.36e-06 8.6e-07 1.61e-07 7.75e-07 1.06e-06 1e-06 7.43e-07 5.29e-07
ENSG00000281912 LINC01144 430663 1.01e-06 7.46e-07 1.07e-07 4.31e-07 1.05e-07 2.54e-07 6.06e-07 1.38e-07 5.74e-07 2.81e-07 9.73e-07 4.75e-07 9.79e-07 1.56e-07 3.16e-07 2.55e-07 4.54e-07 4.24e-07 2.51e-07 1.78e-07 2.52e-07 5.17e-07 4.13e-07 1.61e-07 1.02e-06 2.56e-07 2.94e-07 3.9e-07 4.88e-07 5.82e-07 3.93e-07 3.99e-08 9.46e-08 1.52e-07 3.42e-07 1.21e-07 1.64e-07 1.1e-07 6.81e-08 2.26e-08 1.43e-07 7.53e-07 4.47e-08 1.22e-08 1.49e-07 2.64e-08 1.24e-07 4.41e-08 6.32e-08