Genes within 1Mb (chr1:45732541:T:C):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000070759 TESK2 241378 eQTL 2.65e-07 0.121 0.0234 0.0 0.0 0.105
ENSG00000079277 MKNK1 -884302 eQTL 3.74e-03 0.0574 0.0198 0.0 0.0 0.105
ENSG00000085998 POMGNT1 -487764 eQTL 7.64e-03 0.0445 0.0166 0.0 0.0 0.105
ENSG00000086015 MAST2 -54446 eQTL 5.06e-05 -0.126 0.031 0.0 0.0 0.105
ENSG00000117450 PRDX1 209494 eQTL 3.02e-05 -0.0761 0.0182 0.0 0.0 0.105
ENSG00000117461 PIK3R3 -400495 eQTL 2.56e-05 -0.134 0.0318 0.0 0.0 0.105
ENSG00000123472 ATPAF1 -941326 eQTL 1.84e-02 0.0726 0.0307 0.0 0.0 0.105
ENSG00000126088 UROD 721591 pQTL 3.10e-04 -0.0849 0.0235 0.0 0.0 0.1
ENSG00000142961 MOB3C -884350 eQTL 3.43e-03 0.0875 0.0298 0.0 0.0 0.105
ENSG00000159588 CCDC17 108484 eQTL 1.57e-02 -0.0544 0.0225 0.0 0.0 0.105
ENSG00000159592 GPBP1L1 44428 eQTL 3.67e-02 -0.0354 0.0169 0.0 0.0 0.105
ENSG00000159596 TMEM69 44360 eQTL 1.14e-16 -0.284 0.0336 0.0 0.0 0.105
ENSG00000173846 PLK3 932164 eQTL 3.30e-02 -0.0386 0.0181 0.0 0.0 0.105
ENSG00000225447 RPS15AP10 86344 eQTL 3.92e-05 0.217 0.0526 0.0 0.0 0.105
ENSG00000234093 RPS15AP11 951826 eQTL 2.27e-02 -0.126 0.0552 0.0 0.0 0.105
ENSG00000234329 AL604028.2 80715 eQTL 7.30e-14 0.291 0.0383 0.0 0.0 0.105


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000070759 TESK2 241378 1.29e-06 1.13e-06 2.53e-07 1.23e-06 3.76e-07 5.99e-07 1.5e-06 4.35e-07 1.67e-06 6.05e-07 2.03e-06 8.93e-07 2.55e-06 2.77e-07 5.01e-07 9.92e-07 9.36e-07 9.7e-07 7.29e-07 4.38e-07 7.79e-07 1.87e-06 1.04e-06 5.76e-07 2.25e-06 7.59e-07 1.03e-06 9.24e-07 1.63e-06 1.2e-06 8.17e-07 2.8e-07 2.88e-07 5.53e-07 5.76e-07 5.15e-07 7.19e-07 3.25e-07 4.92e-07 3.02e-07 2.59e-07 1.64e-06 2.19e-07 1.38e-07 2.86e-07 2.16e-07 2.79e-07 1.42e-07 2.03e-07
ENSG00000079277 MKNK1 -884302 2.67e-07 1.3e-07 5.03e-08 1.86e-07 9.24e-08 9.9e-08 1.53e-07 5.48e-08 1.45e-07 5.42e-08 1.54e-07 9.19e-08 1.52e-07 6.76e-08 5.91e-08 7.36e-08 4.09e-08 1.33e-07 5.97e-08 4.21e-08 1.19e-07 1.24e-07 1.44e-07 2.93e-08 1.5e-07 1.21e-07 1.07e-07 9.74e-08 1.12e-07 1.07e-07 9.92e-08 3.08e-08 3.66e-08 8.11e-08 7.02e-08 3.2e-08 5.04e-08 8.63e-08 6.59e-08 3.71e-08 5.13e-08 1.36e-07 5.2e-08 1.61e-08 4.7e-08 1.84e-08 1.21e-07 1.88e-09 4.88e-08
ENSG00000086015 MAST2 -54446 7.94e-06 9.25e-06 1.25e-06 4.87e-06 2.45e-06 4.22e-06 1.02e-05 2.12e-06 8.41e-06 5.09e-06 1.1e-05 5.14e-06 1.34e-05 3.85e-06 2.42e-06 6.58e-06 4.13e-06 7.04e-06 2.7e-06 2.82e-06 5.18e-06 8.59e-06 7.22e-06 3.3e-06 1.32e-05 3.86e-06 4.85e-06 3.69e-06 9.77e-06 8.34e-06 4.94e-06 1.01e-06 1.09e-06 3.54e-06 3.93e-06 2.81e-06 1.76e-06 1.94e-06 2.17e-06 1.01e-06 1.08e-06 1.13e-05 1.42e-06 2.8e-07 8.64e-07 1.81e-06 1.73e-06 7.04e-07 4.43e-07
ENSG00000117448 \N 181998 2.13e-06 2.43e-06 3.2e-07 1.64e-06 4.59e-07 8e-07 1.36e-06 6.41e-07 1.74e-06 8.51e-07 2.02e-06 1.35e-06 3.49e-06 9.33e-07 5.7e-07 1.45e-06 9.71e-07 1.89e-06 7.68e-07 1.14e-06 9.06e-07 2.61e-06 2e-06 1.08e-06 2.87e-06 1.26e-06 1.21e-06 1.46e-06 1.86e-06 1.64e-06 1.23e-06 3.26e-07 6.41e-07 1.21e-06 9.16e-07 8.92e-07 7.91e-07 4.1e-07 1.05e-06 3.33e-07 1.51e-07 2.75e-06 4.81e-07 1.81e-07 3.14e-07 3.26e-07 7.71e-07 2.33e-07 2.01e-07
ENSG00000117450 PRDX1 209494 1.57e-06 1.84e-06 2.73e-07 1.25e-06 4.89e-07 6.45e-07 1.26e-06 4.22e-07 1.71e-06 7.41e-07 1.89e-06 1.27e-06 2.73e-06 4.66e-07 3.28e-07 1.06e-06 1.11e-06 1.27e-06 5.51e-07 7.26e-07 6.48e-07 1.96e-06 1.55e-06 9.28e-07 2.42e-06 1e-06 1.04e-06 1.1e-06 1.66e-06 1.39e-06 7.6e-07 2.62e-07 3.84e-07 8.95e-07 8.07e-07 6.32e-07 7.29e-07 3.15e-07 6.03e-07 2.27e-07 3.03e-07 2.12e-06 3.74e-07 1.75e-07 3.52e-07 3.44e-07 4.22e-07 2.63e-07 2.97e-07
ENSG00000126088 UROD 721591 3.02e-07 1.42e-07 6.28e-08 2.05e-07 1.03e-07 8.45e-08 1.9e-07 5.56e-08 1.59e-07 7.6e-08 1.59e-07 1.22e-07 2.05e-07 7.95e-08 5.94e-08 7.98e-08 4.18e-08 1.64e-07 7.18e-08 5.46e-08 1.22e-07 1.42e-07 1.58e-07 3.4e-08 1.85e-07 1.26e-07 1.17e-07 1.04e-07 1.31e-07 1.06e-07 1.06e-07 3.78e-08 3.68e-08 9.78e-08 3.02e-08 2.74e-08 5.51e-08 8.2e-08 6.3e-08 3.6e-08 5.33e-08 1.46e-07 4.7e-08 1.25e-08 2.64e-08 1.71e-08 8.61e-08 1.98e-09 4.82e-08
ENSG00000132773 \N 392489 1.04e-06 6.65e-07 1.59e-07 4.27e-07 1.11e-07 2.77e-07 6.08e-07 2.04e-07 6.52e-07 3.04e-07 9.39e-07 5.01e-07 9.97e-07 1.59e-07 3.15e-07 3.41e-07 5.34e-07 4.27e-07 2.79e-07 2.25e-07 2.61e-07 5.11e-07 4.13e-07 2.71e-07 1.06e-06 2.49e-07 4.27e-07 3.13e-07 4.88e-07 7.06e-07 3.68e-07 3.28e-08 5.37e-08 2.04e-07 3.47e-07 1.8e-07 1.44e-07 1.14e-07 7.5e-08 2.24e-08 1.01e-07 6.27e-07 5.03e-08 1.62e-08 1.92e-07 2.64e-08 1.37e-07 3.84e-08 6.04e-08
ENSG00000159596 TMEM69 44360 9.67e-06 9.88e-06 1.92e-06 6.21e-06 2.4e-06 4.75e-06 1.17e-05 2.08e-06 1e-05 5.32e-06 1.28e-05 5.76e-06 1.68e-05 3.68e-06 3.21e-06 6.61e-06 5.17e-06 8.43e-06 2.97e-06 3.17e-06 6.18e-06 1.03e-05 9.26e-06 3.85e-06 1.6e-05 4.45e-06 5.79e-06 4.64e-06 1.22e-05 1.05e-05 5.94e-06 1.09e-06 1.24e-06 3.8e-06 4.81e-06 2.85e-06 1.77e-06 2e-06 2.18e-06 1.26e-06 1.29e-06 1.29e-05 1.49e-06 3.6e-07 1.03e-06 1.79e-06 1.87e-06 8.24e-07 5.61e-07
ENSG00000173846 PLK3 932164 2.74e-07 1.25e-07 5.14e-08 1.84e-07 9.25e-08 9.8e-08 1.49e-07 5.43e-08 1.45e-07 4.94e-08 1.57e-07 9e-08 1.47e-07 6.76e-08 6.02e-08 7.53e-08 3.93e-08 1.27e-07 5.75e-08 4.16e-08 1.13e-07 1.27e-07 1.39e-07 2.95e-08 1.46e-07 1.14e-07 1.07e-07 9.65e-08 1.09e-07 1.02e-07 9.7e-08 3.68e-08 3.56e-08 8.25e-08 7.51e-08 3.65e-08 5.11e-08 9.23e-08 6.54e-08 4.02e-08 4.88e-08 1.33e-07 5.22e-08 1.97e-08 5.15e-08 1.84e-08 1.22e-07 3.79e-09 4.9e-08
ENSG00000234329 AL604028.2 80715 5.63e-06 5.69e-06 8.27e-07 3.51e-06 1.87e-06 1.85e-06 8.17e-06 1.29e-06 4.75e-06 3.25e-06 7.78e-06 2.93e-06 1.01e-05 2.13e-06 1.05e-06 4.58e-06 3.02e-06 3.79e-06 1.93e-06 2.01e-06 2.93e-06 6.84e-06 4.93e-06 2.32e-06 8.8e-06 2.32e-06 3.05e-06 1.83e-06 6.35e-06 6.83e-06 3.29e-06 5.74e-07 6.72e-07 2.75e-06 2.12e-06 1.91e-06 1.4e-06 9.68e-07 1.27e-06 8.28e-07 1.02e-06 7.97e-06 7.18e-07 1.92e-07 6.99e-07 8.66e-07 9.16e-07 7.07e-07 5.76e-07