Genes within 1Mb (chr1:45629257:C:G):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000086015 MAST2 -157730 eQTL 2.18e-20 0.386 0.0408 0.0265 0.0343 0.052
ENSG00000117425 PTCH2 786004 eQTL 1.41e-02 0.126 0.0511 0.0 0.0 0.052
ENSG00000117448 AKR1A1 78714 eQTL 1.36e-02 -0.0603 0.0244 0.0 0.0 0.052
ENSG00000117461 PIK3R3 -503779 eQTL 4.88e-02 -0.0862 0.0437 0.0 0.0 0.052
ENSG00000126088 UROD 618307 pQTL 2.15e-04 0.12 0.0323 0.0 0.0 0.0509
ENSG00000126088 UROD 618307 eQTL 8.58e-03 0.118 0.0449 0.0 0.0 0.052
ENSG00000132773 TOE1 289205 eQTL 1.36e-02 -0.0708 0.0286 0.0 0.0 0.052
ENSG00000132780 NASP 45411 eQTL 3.02e-11 -0.23 0.0342 0.00473 0.00505 0.052
ENSG00000159588 CCDC17 5200 eQTL 2.90e-24 -0.304 0.0291 0.0 0.0 0.052
ENSG00000159592 GPBP1L1 -58856 eQTL 5.07e-03 0.0649 0.0231 0.0 0.0 0.052
ENSG00000162415 ZSWIM5 323048 eQTL 2.20e-02 -0.104 0.0453 0.0 0.0 0.052
ENSG00000197429 IPP -121393 eQTL 8.63e-03 -0.115 0.0439 0.0 0.0 0.052
ENSG00000222009 BTBD19 820775 eQTL 1.25e-04 -0.122 0.0317 0.0 0.0 0.052
ENSG00000225447 RPS15AP10 -16940 eQTL 3.02e-02 -0.157 0.0723 0.0 0.0 0.052
ENSG00000232022 FAAHP1 -802872 eQTL 4.63e-03 -0.183 0.0646 0.00127 0.0 0.052
ENSG00000234329 AL604028.2 -22569 eQTL 1.34e-03 -0.172 0.0535 0.0 0.0 0.052
ENSG00000281912 LINC01144 325347 eQTL 4.52e-04 0.255 0.0725 0.0 0.0 0.052


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000086015 MAST2 -157730 5.04e-05 1.02e-05 6.35e-07 4.51e-06 1.66e-06 5.8e-06 1.06e-05 1.19e-06 8.03e-06 4.76e-06 1.19e-05 4.92e-06 1.26e-05 3.96e-06 3.17e-06 6.66e-06 3.75e-06 7.87e-06 2.19e-06 1.4e-06 4.63e-06 1.14e-05 1.14e-05 1.95e-06 1.54e-05 2.34e-06 4.46e-06 2.43e-06 7.44e-06 7.44e-06 4.49e-06 5.42e-07 7.66e-07 3.24e-06 4.02e-06 9.79e-07 1.04e-06 4.58e-07 1.79e-06 1.04e-06 6.17e-07 1.7e-05 2.88e-06 1.78e-07 7.28e-07 1.67e-06 9.9e-07 5.05e-07 2.05e-07
ENSG00000117425 PTCH2 786004 1.26e-06 4.78e-07 5.82e-08 2.87e-07 1.05e-07 3.15e-07 5.01e-07 6.12e-08 2.26e-07 1.28e-07 3.66e-07 2.55e-07 7.53e-07 9.48e-08 7.35e-08 1.39e-07 4.25e-08 3.79e-07 7.42e-08 4.8e-08 1.39e-07 2.96e-07 2.67e-07 2.64e-08 3.7e-07 2.01e-07 1.31e-07 1.28e-07 1.58e-07 1.39e-07 1.26e-07 4.22e-08 4.34e-08 5.42e-07 3.71e-07 2.79e-08 5.54e-08 6.2e-08 5.28e-08 8.03e-08 5.41e-08 6.95e-07 6.53e-08 6.49e-08 6.92e-08 4.38e-08 8.74e-08 1.88e-09 4.85e-08
ENSG00000117448 AKR1A1 78714 7.24e-05 1.51e-05 1.3e-06 8.01e-06 2.36e-06 1.15e-05 1.98e-05 2.15e-06 1.31e-05 6.68e-06 1.85e-05 6.94e-06 2.3e-05 5.14e-06 5.1e-06 1.01e-05 8.14e-06 1.53e-05 3.32e-06 2.83e-06 7.06e-06 1.71e-05 1.78e-05 3.58e-06 2.8e-05 4.3e-06 7.41e-06 5.4e-06 1.37e-05 1.1e-05 8.26e-06 9.71e-07 1.14e-06 3.8e-06 6.01e-06 2.11e-06 1.79e-06 1.3e-06 1.99e-06 9.98e-07 9.82e-07 2.52e-05 4.31e-06 1.61e-07 9.55e-07 2.2e-06 1.98e-06 7.83e-07 5.97e-07
ENSG00000126088 UROD 618307 1.38e-06 9.07e-07 7.16e-08 4.31e-07 1.08e-07 4.49e-07 7.22e-07 9.26e-08 4.74e-07 2.62e-07 9.73e-07 4.94e-07 1.37e-06 1.56e-07 2.26e-07 2.89e-07 1.73e-07 5.16e-07 1.62e-07 8.52e-08 2.3e-07 5.76e-07 4.74e-07 4.15e-08 9.26e-07 2.74e-07 2.58e-07 1.97e-07 3.86e-07 3.8e-07 1.95e-07 3.08e-08 4.42e-08 5.55e-07 3.92e-07 5.23e-08 1.12e-07 1.02e-07 1.41e-07 1.58e-08 4.68e-08 1.43e-06 3.5e-07 1.99e-07 3.84e-08 1.24e-07 9.25e-08 2.16e-09 5.04e-08
ENSG00000132780 NASP 45411 0.000101 2.13e-05 2.47e-06 1.01e-05 2.75e-06 1.8e-05 2.75e-05 2.74e-06 1.72e-05 8.86e-06 2.29e-05 8.32e-06 3.17e-05 7.58e-06 5.38e-06 1.18e-05 1.11e-05 2.21e-05 4.2e-06 3.49e-06 9.62e-06 2.09e-05 2.34e-05 5.06e-06 3.51e-05 5.6e-06 8.18e-06 7.73e-06 1.91e-05 1.65e-05 1.11e-05 1.08e-06 1.12e-06 4.4e-06 7.28e-06 2.68e-06 1.79e-06 1.89e-06 2.22e-06 1.38e-06 9.98e-07 3.42e-05 5.03e-06 1.62e-07 1.93e-06 2.35e-06 3.4e-06 8.09e-07 4.95e-07
ENSG00000159588 CCDC17 5200 0.00016 3.69e-05 4.41e-06 1.53e-05 5.58e-06 2.67e-05 5.32e-05 3.76e-06 3.23e-05 1.53e-05 3.97e-05 1.48e-05 6.01e-05 1.45e-05 8e-06 2.32e-05 2.21e-05 4.84e-05 8.18e-06 5.73e-06 1.97e-05 4.07e-05 4.62e-05 9.41e-06 5.19e-05 9.53e-06 1.65e-05 1.15e-05 3.85e-05 3.25e-05 1.68e-05 1.27e-06 1.81e-06 6.8e-06 1.05e-05 4.49e-06 1.86e-06 2.33e-06 3.74e-06 2.42e-06 1.2e-06 6.17e-05 9.75e-06 1.44e-07 3.13e-06 3.2e-06 4.08e-06 1.18e-06 1.32e-06
ENSG00000159592 GPBP1L1 -58856 8.53e-05 1.86e-05 1.98e-06 9.4e-06 2.48e-06 1.52e-05 2.32e-05 2.45e-06 1.59e-05 8.28e-06 2.06e-05 7.82e-06 2.79e-05 6.61e-06 5.23e-06 1.07e-05 9.72e-06 1.92e-05 3.58e-06 3.14e-06 8.55e-06 1.88e-05 2.02e-05 4.69e-06 3.23e-05 5.22e-06 8e-06 6.67e-06 1.66e-05 1.43e-05 1.01e-05 1.01e-06 1.28e-06 4.04e-06 6.68e-06 2.67e-06 1.76e-06 1.84e-06 2.13e-06 1.27e-06 9.94e-07 3.02e-05 4.99e-06 1.65e-07 1.44e-06 2.32e-06 2.95e-06 6.92e-07 4.67e-07
ENSG00000173660 \N -674441 1.29e-06 6.97e-07 6.45e-08 3.92e-07 1.05e-07 4.06e-07 6.19e-07 7.46e-08 3.51e-07 2.12e-07 7.15e-07 3.84e-07 1.05e-06 1.49e-07 1.45e-07 2.14e-07 8.74e-08 4.31e-07 9.97e-08 6.03e-08 1.87e-07 4.66e-07 3.84e-07 3.58e-08 6.65e-07 2.34e-07 1.97e-07 1.7e-07 2.78e-07 2.39e-07 1.71e-07 3.64e-08 6.08e-08 6e-07 3e-07 4.68e-08 1.15e-07 8.15e-08 7.41e-08 3.12e-08 6.28e-08 1.09e-06 1.23e-07 1.65e-07 5.19e-08 9.94e-08 7.8e-08 1.98e-09 4.91e-08
ENSG00000222009 BTBD19 820775 1.29e-06 3.77e-07 5.64e-08 2.57e-07 1.02e-07 2.63e-07 4.42e-07 5.68e-08 2.01e-07 1.15e-07 3.21e-07 2.22e-07 6.77e-07 9.15e-08 6.2e-08 1.17e-07 4.45e-08 3.44e-07 7.29e-08 4.3e-08 1.34e-07 2.63e-07 2.33e-07 3.03e-08 3.14e-07 1.9e-07 1.25e-07 1.17e-07 1.48e-07 1.29e-07 1.14e-07 4.07e-08 4.23e-08 4.51e-07 3.38e-07 3.07e-08 6.04e-08 5.25e-08 5.89e-08 7.92e-08 5.45e-08 5.96e-07 7.37e-08 4.2e-08 7.79e-08 3.46e-08 1e-07 3.8e-09 4.74e-08
ENSG00000234329 AL604028.2 -22569 0.000143 2.85e-05 2.95e-06 1.27e-05 3.5e-06 2.24e-05 4.15e-05 3.36e-06 2.13e-05 1.1e-05 2.99e-05 9.87e-06 4.07e-05 9.95e-06 5.99e-06 1.56e-05 1.55e-05 3.08e-05 5.97e-06 4.27e-06 1.38e-05 2.81e-05 3.36e-05 6.62e-06 4.3e-05 6.51e-06 1.09e-05 9e-06 2.89e-05 2.28e-05 1.29e-05 1.05e-06 1.23e-06 5.37e-06 8.64e-06 3.17e-06 1.77e-06 2e-06 2.84e-06 1.88e-06 9.79e-07 4.6e-05 6.91e-06 1.58e-07 2.34e-06 2.79e-06 3.77e-06 6.73e-07 6.37e-07
ENSG00000281912 LINC01144 325347 7.46e-06 3.66e-06 2.24e-07 1.85e-06 3.73e-07 1.21e-06 2.48e-06 4.32e-07 1.81e-06 9.61e-07 2.52e-06 1.26e-06 3.75e-06 1.44e-06 9.3e-07 1.7e-06 1.01e-06 2.19e-06 5.56e-07 4.61e-07 1.14e-06 3.49e-06 3.21e-06 5.89e-07 3.6e-06 1.08e-06 1.17e-06 1.05e-06 1.8e-06 1.66e-06 7.74e-07 3.51e-08 4.71e-07 1.83e-06 1.73e-06 4.32e-07 7.48e-07 3.81e-07 1.34e-06 3.45e-07 2.71e-07 4.93e-06 1.39e-06 1.52e-07 1.87e-07 3.05e-07 2.6e-07 8.8e-08 5.35e-08