Genes within 1Mb (chr1:45604575:A:G):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000070759 TESK2 113412 eQTL 3.12e-02 0.0659 0.0305 0.0 0.0 0.0604
ENSG00000086015 MAST2 -182412 eQTL 1.61e-18 0.348 0.0388 0.0 0.0 0.0604
ENSG00000117425 PTCH2 761322 eQTL 2.49e-02 0.109 0.0484 0.0 0.0 0.0604
ENSG00000117448 AKR1A1 54032 eQTL 1.49e-04 -0.0874 0.023 0.00106 0.00163 0.0604
ENSG00000117480 FAAH -789742 eQTL 5.76e-03 0.12 0.0433 0.0 0.0 0.0604
ENSG00000117481 NSUN4 -735602 eQTL 1.09e-03 0.163 0.0497 0.0 0.0 0.0604
ENSG00000126088 UROD 593625 pQTL 5.96e-03 0.0829 0.0301 0.0 0.0 0.06
ENSG00000126106 TMEM53 930094 eQTL 2.91e-02 0.115 0.0528 0.0 0.0 0.0604
ENSG00000132773 TOE1 264523 eQTL 8.33e-03 -0.0716 0.0271 0.0 0.0 0.0604
ENSG00000132780 NASP 20729 eQTL 1.87e-10 -0.209 0.0324 0.0 0.0 0.0604
ENSG00000159588 CCDC17 -19482 eQTL 2.89e-33 -0.337 0.027 0.018 0.0207 0.0604
ENSG00000159592 GPBP1L1 -83538 eQTL 1.06e-02 0.056 0.0219 0.0 0.0 0.0604
ENSG00000197429 IPP -146075 eQTL 2.83e-03 -0.124 0.0415 0.0 0.0 0.0604
ENSG00000222009 BTBD19 796093 eQTL 2.31e-03 -0.0918 0.03 0.0 0.0 0.0604
ENSG00000225447 RPS15AP10 -41622 eQTL 6.08e-03 -0.188 0.0683 0.0 0.0 0.0604
ENSG00000230896 AL604028.1 -92500 eQTL 3.35e-02 -0.165 0.0774 0.0 0.0 0.0604
ENSG00000232022 FAAHP1 -827554 eQTL 2.73e-02 -0.135 0.0612 0.0 0.0 0.0604
ENSG00000234329 AL604028.2 -47251 eQTL 2.39e-02 -0.115 0.0508 0.0 0.0 0.0604
ENSG00000281912 LINC01144 300665 eQTL 2.96e-05 0.287 0.0684 0.018 0.0176 0.0604


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000070759 TESK2 113412 5.68e-06 9.31e-06 1.37e-06 4.35e-06 1.9e-06 2.14e-06 9.62e-06 1.44e-06 5.24e-06 4.2e-06 8.97e-06 3.74e-06 1.13e-05 3.66e-06 1.63e-06 6.37e-06 3.71e-06 3.79e-06 1.84e-06 2.57e-06 2.66e-06 7.66e-06 5.57e-06 2.01e-06 1.1e-05 2.21e-06 4.45e-06 2.43e-06 7.09e-06 7.22e-06 3.4e-06 5.83e-07 6.77e-07 2.63e-06 2.14e-06 1.71e-06 1.02e-06 5.07e-07 1.12e-06 1e-06 2.8e-07 1.03e-05 1.09e-06 1.81e-07 4.39e-07 1.63e-06 9.51e-07 6.25e-07 4.74e-07
ENSG00000086015 MAST2 -182412 2.96e-06 4.35e-06 8.92e-07 2.02e-06 8.58e-07 8.5e-07 2.52e-06 9.98e-07 2.06e-06 1.47e-06 2.77e-06 2.2e-06 5.39e-06 1.25e-06 1e-06 2.99e-06 2.06e-06 2.17e-06 1.51e-06 1.2e-06 1.07e-06 3.65e-06 2.67e-06 1.22e-06 4.87e-06 1.26e-06 2.2e-06 1.84e-06 3.54e-06 2.81e-06 2e-06 4.51e-07 7.09e-07 1.33e-06 1.56e-06 9.09e-07 8.21e-07 4.21e-07 1.11e-06 3.47e-07 2.85e-07 4.47e-06 3.97e-07 1.81e-07 3.43e-07 1.32e-06 8.12e-07 2.4e-07 3.41e-07
ENSG00000117425 PTCH2 761322 2.74e-07 1.34e-07 6.15e-08 1.86e-07 9.25e-08 9.91e-08 1.49e-07 5.37e-08 1.41e-07 4.94e-08 1.6e-07 8.55e-08 1.45e-07 6.76e-08 5.91e-08 7.49e-08 4.18e-08 1.26e-07 6.92e-08 4.1e-08 1.05e-07 1.24e-07 1.34e-07 3.79e-08 1.68e-07 1.14e-07 1.13e-07 9.57e-08 1.08e-07 1.1e-07 9.64e-08 3.87e-08 3.61e-08 8.44e-08 7.36e-08 3.93e-08 5.22e-08 9.3e-08 6.56e-08 3.77e-08 4.18e-08 1.36e-07 5.21e-08 1.78e-08 7.91e-08 9.86e-09 1.19e-07 1.88e-09 4.85e-08
ENSG00000117448 AKR1A1 54032 1.26e-05 1.96e-05 2.45e-06 1.11e-05 2.42e-06 5.91e-06 2.17e-05 2.78e-06 1.53e-05 7.27e-06 1.94e-05 7.45e-06 2.93e-05 6.86e-06 4.93e-06 1.01e-05 8.14e-06 1.21e-05 3.58e-06 4.08e-06 7e-06 1.47e-05 1.52e-05 4.28e-06 2.44e-05 4.58e-06 8e-06 7.23e-06 1.66e-05 1.32e-05 9.59e-06 9.55e-07 1.48e-06 4.08e-06 6.02e-06 3.63e-06 1.73e-06 2.26e-06 2.42e-06 2.33e-06 9.87e-07 2.31e-05 2.34e-06 1.56e-07 7.93e-07 2.49e-06 2.51e-06 7.39e-07 7.09e-07
ENSG00000117481 NSUN4 -735602 2.74e-07 1.35e-07 6.42e-08 1.81e-07 9.79e-08 9.05e-08 1.53e-07 5.4e-08 1.44e-07 5.42e-08 1.62e-07 8.68e-08 1.52e-07 7.13e-08 6.18e-08 7.5e-08 4.45e-08 1.27e-07 7.12e-08 4.23e-08 1.04e-07 1.25e-07 1.39e-07 3.68e-08 1.72e-07 1.21e-07 1.18e-07 9.57e-08 1.12e-07 1.07e-07 9.7e-08 3.65e-08 3.89e-08 8.25e-08 6.67e-08 3.95e-08 5.3e-08 8.93e-08 6.54e-08 4.02e-08 4.36e-08 1.33e-07 5.2e-08 1.85e-08 7.79e-08 8.07e-09 1.19e-07 1.89e-09 4.81e-08
ENSG00000126088 UROD 593625 3.14e-07 1.92e-07 9.49e-08 2.27e-07 1.05e-07 1.03e-07 2.16e-07 5.68e-08 1.5e-07 9.72e-08 1.63e-07 1.23e-07 2.38e-07 8.44e-08 6.6e-08 1.01e-07 8.74e-08 1.77e-07 8e-08 6.16e-08 1.25e-07 1.98e-07 1.62e-07 3.22e-08 3.55e-07 1.43e-07 1.31e-07 1.04e-07 1.32e-07 1.06e-07 1.14e-07 3.68e-08 4.37e-08 9.58e-08 4.41e-08 2.68e-08 6.14e-08 7.61e-08 6.41e-08 4.41e-08 3.89e-08 1.59e-07 3.18e-08 5.74e-09 5.19e-08 1.35e-08 8.74e-08 0.0 4.82e-08
ENSG00000132773 TOE1 264523 1.27e-06 1.95e-06 3.17e-07 1.28e-06 4.13e-07 6.4e-07 1.43e-06 3.96e-07 1.4e-06 6.36e-07 1.89e-06 9.21e-07 2.54e-06 4.19e-07 4.61e-07 1.06e-06 1.01e-06 9.65e-07 7.29e-07 4.74e-07 4.77e-07 1.98e-06 9.11e-07 5.43e-07 2.59e-06 7.38e-07 1.01e-06 7.09e-07 1.57e-06 1.27e-06 7.41e-07 3.03e-07 3.19e-07 6.19e-07 5.34e-07 4.6e-07 6.89e-07 2.88e-07 3.93e-07 2.76e-07 1.23e-07 1.96e-06 4.33e-07 1.49e-07 1.93e-07 3.67e-07 2.15e-07 1.7e-07 2.87e-07
ENSG00000132780 NASP 20729 2.31e-05 2.95e-05 4.26e-06 1.41e-05 3.55e-06 1.03e-05 3.46e-05 3.73e-06 2.15e-05 1.13e-05 2.99e-05 1.14e-05 4.19e-05 1.14e-05 5.98e-06 1.35e-05 1.22e-05 1.83e-05 6.45e-06 5.3e-06 9.95e-06 2.42e-05 2.49e-05 6.62e-06 3.36e-05 5.34e-06 1.01e-05 9.35e-06 2.65e-05 2.05e-05 1.5e-05 1.38e-06 2.02e-06 5.59e-06 8.98e-06 4.55e-06 2.02e-06 2.81e-06 3.4e-06 2.86e-06 1.14e-06 3.4e-05 2.64e-06 1.92e-07 1.85e-06 3.13e-06 3.49e-06 1.24e-06 1.28e-06
ENSG00000159588 CCDC17 -19482 2.37e-05 2.99e-05 4.32e-06 1.42e-05 3.6e-06 1.05e-05 3.55e-05 3.66e-06 2.19e-05 1.13e-05 3.05e-05 1.16e-05 4.23e-05 1.16e-05 6.08e-06 1.39e-05 1.24e-05 1.84e-05 6.56e-06 5.37e-06 1.01e-05 2.44e-05 2.52e-05 6.73e-06 3.43e-05 5.39e-06 1.02e-05 9.46e-06 2.67e-05 2.06e-05 1.53e-05 1.4e-06 2e-06 5.65e-06 9.01e-06 4.55e-06 2.04e-06 2.85e-06 3.46e-06 2.86e-06 1.14e-06 3.42e-05 2.65e-06 1.9e-07 1.87e-06 3.23e-06 3.59e-06 1.28e-06 1.33e-06
ENSG00000159592 GPBP1L1 -83538 8.08e-06 1.27e-05 1.56e-06 7.29e-06 2.44e-06 4.18e-06 1.22e-05 2.15e-06 1e-05 5.36e-06 1.28e-05 5.63e-06 1.79e-05 4.02e-06 3.26e-06 7.72e-06 4.93e-06 7.71e-06 2.64e-06 2.89e-06 5.16e-06 1.03e-05 9.02e-06 3.24e-06 1.54e-05 3.74e-06 6.78e-06 4.83e-06 1.16e-05 8.53e-06 5.4e-06 1.11e-06 1.22e-06 3.29e-06 4.14e-06 2.65e-06 1.71e-06 1.95e-06 2.15e-06 1.42e-06 7.14e-07 1.57e-05 1.38e-06 1.66e-07 7.63e-07 1.72e-06 1.75e-06 7.5e-07 4.84e-07
ENSG00000222009 BTBD19 796093 2.69e-07 1.3e-07 5.93e-08 1.8e-07 9.16e-08 9.76e-08 1.44e-07 5.2e-08 1.4e-07 4.74e-08 1.62e-07 8.36e-08 1.41e-07 6.56e-08 6.02e-08 7.53e-08 4.01e-08 1.21e-07 6.32e-08 4e-08 1.04e-07 1.24e-07 1.32e-07 4.16e-08 1.63e-07 1.14e-07 1.07e-07 9.32e-08 1.05e-07 1.12e-07 9.91e-08 3.7e-08 3.35e-08 8.68e-08 8.21e-08 3.76e-08 4.99e-08 9.25e-08 7.23e-08 3.55e-08 4e-08 1.33e-07 5.27e-08 1.7e-08 8.03e-08 6.83e-09 1.22e-07 3.79e-09 4.73e-08
ENSG00000230896 AL604028.1 -92500 7.7e-06 1.15e-05 1.25e-06 6.5e-06 2.26e-06 3.83e-06 1.14e-05 1.92e-06 8.87e-06 4.99e-06 1.17e-05 5.09e-06 1.47e-05 3.81e-06 2.66e-06 6.97e-06 4.12e-06 6.55e-06 2.64e-06 2.77e-06 4.57e-06 9.49e-06 7.37e-06 2.82e-06 1.31e-05 3.04e-06 5.93e-06 3.99e-06 1.02e-05 7.92e-06 4.54e-06 9.9e-07 1.29e-06 3.03e-06 3.56e-06 2.3e-06 1.55e-06 1.81e-06 1.61e-06 1.18e-06 5.44e-07 1.36e-05 1.43e-06 1.53e-07 7.84e-07 1.67e-06 1.4e-06 7.42e-07 4.83e-07
ENSG00000234329 AL604028.2 -47251 1.39e-05 2.16e-05 2.95e-06 1.2e-05 2.48e-06 6.32e-06 2.37e-05 3.09e-06 1.66e-05 8.22e-06 2.1e-05 8.05e-06 3.19e-05 7.67e-06 5.14e-06 1.05e-05 8.44e-06 1.32e-05 4.22e-06 4.23e-06 7.59e-06 1.67e-05 1.72e-05 4.74e-06 2.63e-05 4.96e-06 7.99e-06 7.76e-06 1.8e-05 1.48e-05 1.08e-05 1.05e-06 1.4e-06 4.2e-06 6.48e-06 3.79e-06 1.76e-06 2.39e-06 2.73e-06 2.49e-06 9.75e-07 2.55e-05 2.48e-06 1.79e-07 9.54e-07 2.61e-06 2.8e-06 8.27e-07 8.91e-07
ENSG00000281912 LINC01144 300665 1.24e-06 1.13e-06 2.98e-07 7.96e-07 3.51e-07 6.31e-07 1.61e-06 3.31e-07 1.12e-06 4.31e-07 1.35e-06 6.6e-07 2.02e-06 2.63e-07 5.65e-07 9.45e-07 1.16e-06 6.21e-07 7.73e-07 6.82e-07 2.89e-07 1.72e-06 8.1e-07 5.75e-07 2.46e-06 4.17e-07 9.3e-07 5.67e-07 1.3e-06 1.28e-06 5.79e-07 1.82e-07 2.42e-07 6.19e-07 4.63e-07 4.6e-07 5.04e-07 1.55e-07 1.71e-07 9.18e-08 5.56e-08 1.53e-06 3.01e-07 1.38e-07 1.47e-07 3.46e-07 1.87e-07 4.85e-08 1.57e-07