Genes within 1Mb (chr1:45599820:A:C):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000085998 POMGNT1 -620485 eQTL 2.76e-02 0.098 0.0444 0.0 0.0 0.0147
ENSG00000086015 MAST2 -187167 eQTL 1.40e-08 0.469 0.082 0.0 0.0 0.0147
ENSG00000117448 AKR1A1 49277 eQTL 1.80e-02 -0.113 0.0476 0.0 0.0 0.0147
ENSG00000117461 PIK3R3 -533216 eQTL 2.49e-02 -0.192 0.0853 0.0 0.0 0.0147
ENSG00000132780 NASP 15974 eQTL 2.20e-03 -0.209 0.068 0.0 0.0 0.0147
ENSG00000159588 CCDC17 -24237 eQTL 6.64e-13 -0.426 0.0585 0.0 0.0 0.0147
ENSG00000173846 PLK3 799443 eQTL 6.14e-02 -0.0902 0.0482 0.0014 0.0 0.0147
ENSG00000188396 TCTEX1D4 793145 eQTL 2.34e-03 -0.172 0.0563 0.0 0.0 0.0147
ENSG00000222009 BTBD19 791338 eQTL 1.38e-03 -0.199 0.062 0.0 0.0 0.0147
ENSG00000234329 AL604028.2 -52006 eQTL 1.65e-02 -0.252 0.105 0.0 0.0 0.0147
ENSG00000281912 LINC01144 295910 eQTL 6.26e-03 0.389 0.142 0.0 0.0 0.0147


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000086015 MAST2 -187167 4.54e-06 4.82e-06 8.13e-07 2.95e-06 8.7e-07 1.47e-06 3e-06 9.05e-07 3.19e-06 1.46e-06 4.1e-06 2.72e-06 7.2e-06 1.96e-06 1.38e-06 2.49e-06 1.84e-06 2.69e-06 1.45e-06 9.89e-07 2.63e-06 4.1e-06 3.24e-06 1.71e-06 4.97e-06 1.23e-06 2.41e-06 1.37e-06 3.5e-06 3.53e-06 1.96e-06 4.72e-07 7.92e-07 1.74e-06 2.04e-06 8.52e-07 9.59e-07 4.75e-07 1.28e-06 3.28e-07 1.52e-07 5.7e-06 1.31e-06 1.66e-07 3.82e-07 3.75e-07 7.44e-07 3.79e-07 3.35e-07
ENSG00000117448 AKR1A1 49277 2.55e-05 2.36e-05 3.05e-06 1.24e-05 3.05e-06 9.53e-06 2.91e-05 3.72e-06 2e-05 9.47e-06 2.6e-05 9.68e-06 3.59e-05 9.29e-06 5.16e-06 1.15e-05 1.14e-05 1.73e-05 4.67e-06 4.38e-06 9.08e-06 1.94e-05 1.95e-05 5.59e-06 3e-05 5.36e-06 9.29e-06 8.11e-06 1.86e-05 1.55e-05 1.24e-05 1.49e-06 1.79e-06 4.75e-06 8.98e-06 3.73e-06 1.87e-06 2.69e-06 3.25e-06 2.66e-06 1.21e-06 2.65e-05 2.86e-06 2.36e-07 1.7e-06 2.64e-06 2.91e-06 1.26e-06 1.03e-06
ENSG00000159588 CCDC17 -24237 3.39e-05 3.04e-05 5.06e-06 1.49e-05 4.75e-06 1.36e-05 4.1e-05 4.37e-06 2.88e-05 1.38e-05 3.55e-05 1.55e-05 4.54e-05 1.3e-05 6.11e-06 1.63e-05 1.56e-05 2.32e-05 6.96e-06 5.95e-06 1.34e-05 2.86e-05 2.82e-05 7.92e-06 3.84e-05 6.74e-06 1.31e-05 1.16e-05 2.78e-05 2.15e-05 1.7e-05 1.64e-06 2.43e-06 6.6e-06 1.11e-05 4.91e-06 2.78e-06 2.98e-06 4.3e-06 3.22e-06 1.7e-06 3.45e-05 3.5e-06 3.18e-07 2.04e-06 3.29e-06 3.8e-06 1.49e-06 1.53e-06
ENSG00000188396 TCTEX1D4 793145 2.67e-07 1.35e-07 4.47e-08 2.05e-07 9.01e-08 9.05e-08 1.53e-07 5.19e-08 1.44e-07 4.4e-08 1.54e-07 8.59e-08 1.52e-07 6.56e-08 5.99e-08 7.37e-08 4.17e-08 1.27e-07 5.75e-08 4.3e-08 1.21e-07 1.28e-07 1.32e-07 2.93e-08 1.4e-07 1.14e-07 1.07e-07 9.61e-08 1.05e-07 1.07e-07 9.64e-08 3.68e-08 3.73e-08 8.23e-08 3.57e-08 3.2e-08 4.47e-08 8.72e-08 6.78e-08 3.55e-08 4.02e-08 1.4e-07 3.09e-08 1.04e-08 5.7e-08 1.84e-08 1.21e-07 3.86e-09 4.94e-08
ENSG00000198520 \N 925107 2.69e-07 1.25e-07 3.54e-08 1.82e-07 9.02e-08 9.8e-08 1.42e-07 5.33e-08 1.4e-07 4.38e-08 1.62e-07 7.75e-08 1.41e-07 6.21e-08 5.53e-08 7.5e-08 3.94e-08 1.18e-07 5.36e-08 4.45e-08 1.04e-07 1.26e-07 1.26e-07 3.68e-08 1.33e-07 1.15e-07 1.11e-07 9.32e-08 1.02e-07 1.1e-07 9.73e-08 3.89e-08 3.56e-08 8.55e-08 4.84e-08 3.94e-08 5.65e-08 9.25e-08 7.63e-08 3.03e-08 4.44e-08 1.35e-07 3.35e-08 1.74e-08 7.26e-08 1.83e-08 1.24e-07 4.04e-09 5.09e-08
ENSG00000222009 BTBD19 791338 2.67e-07 1.35e-07 4.47e-08 2.05e-07 9.01e-08 9.05e-08 1.53e-07 5.19e-08 1.44e-07 4.4e-08 1.54e-07 8.59e-08 1.52e-07 6.56e-08 5.99e-08 7.37e-08 4.17e-08 1.27e-07 5.75e-08 4.3e-08 1.21e-07 1.28e-07 1.34e-07 2.64e-08 1.4e-07 1.14e-07 1.07e-07 9.61e-08 1.05e-07 1.07e-07 9.64e-08 3.68e-08 3.73e-08 8.56e-08 3.57e-08 3.2e-08 4.54e-08 8.72e-08 6.78e-08 3.55e-08 4.02e-08 1.4e-07 3.14e-08 1.04e-08 5.7e-08 1.84e-08 1.21e-07 3.86e-09 4.94e-08
ENSG00000234329 AL604028.2 -52006 2.47e-05 2.26e-05 2.98e-06 1.21e-05 2.97e-06 9.07e-06 2.77e-05 3.46e-06 1.9e-05 9.14e-06 2.51e-05 9.41e-06 3.51e-05 8.94e-06 5.1e-06 1.11e-05 1.11e-05 1.66e-05 4.51e-06 4.28e-06 8.72e-06 1.84e-05 1.85e-05 5.33e-06 2.94e-05 5.37e-06 8.89e-06 7.92e-06 1.79e-05 1.52e-05 1.2e-05 1.45e-06 1.66e-06 4.4e-06 8.76e-06 3.74e-06 1.84e-06 2.61e-06 3.15e-06 2.66e-06 1.2e-06 2.57e-05 2.81e-06 2.22e-07 1.59e-06 2.56e-06 2.8e-06 1.21e-06 1.01e-06