Genes within 1Mb (chr1:45534101:A:ACTTTT):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000070759 TESK2 42938 eQTL 8.52e-04 -0.0835 0.0249 0.0 0.0 0.0972
ENSG00000085999 RAD54L -713587 eQTL 3.58e-02 0.0695 0.0331 0.0 0.0 0.0972
ENSG00000086015 MAST2 -252886 eQTL 1.31e-05 -0.144 0.0328 0.0 0.0 0.0972
ENSG00000117425 PTCH2 690848 eQTL 3.97e-02 -0.0817 0.0397 0.0 0.0 0.0972
ENSG00000117450 PRDX1 11054 eQTL 1.81e-04 -0.0724 0.0193 0.00113 0.00102 0.0972
ENSG00000117461 PIK3R3 -598935 eQTL 3.12e-02 0.0731 0.0339 0.0 0.0 0.0972
ENSG00000117481 NSUN4 -806076 eQTL 1.50e-02 -0.0994 0.0408 0.0 0.0 0.0972
ENSG00000126088 UROD 523151 pQTL 5.93e-03 -0.0695 0.0252 0.0 0.0 0.0925
ENSG00000132763 MMACHC 33801 eQTL 1.24e-02 -0.128 0.0512 0.0 0.0 0.0972
ENSG00000132773 TOE1 194049 eQTL 9.00e-03 0.0581 0.0222 0.0 0.0 0.0972
ENSG00000132780 NASP -49745 eQTL 2.99e-04 0.0978 0.0269 0.0 0.0 0.0972
ENSG00000159588 CCDC17 -89956 eQTL 3.31e-17 0.198 0.023 0.0 0.0 0.0972
ENSG00000159596 TMEM69 -154080 eQTL 2.38e-05 0.155 0.0366 0.0 0.0 0.0972
ENSG00000197429 IPP -216549 eQTL 2.41e-03 0.103 0.034 0.0 0.0 0.0972
ENSG00000222009 BTBD19 725619 eQTL 1.21e-04 0.0947 0.0245 0.0 0.0 0.0972
ENSG00000225721 AL592166.1 758291 eQTL 6.80e-04 -0.204 0.0597 0.0 0.0 0.0972
ENSG00000280670 CCDC163 34022 eQTL 9.54e-61 -0.958 0.0541 0.0 0.0 0.0972


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000070759 TESK2 42938 6.08e-06 5.1e-06 8.95e-07 3.09e-06 4.41e-07 1.66e-06 3.96e-06 3.28e-07 2.37e-06 9.12e-07 3.22e-06 3.54e-06 5.73e-06 2.03e-06 1.11e-06 1.7e-06 1.99e-06 3.87e-06 1.37e-06 7.64e-07 3.12e-06 5.77e-06 3.44e-06 1.17e-06 4.64e-06 1.23e-06 1.19e-06 1.84e-06 3.81e-06 3.32e-06 1.91e-06 4.06e-08 5.28e-07 1.82e-06 1.76e-06 7.22e-07 8.03e-07 4.13e-07 4.53e-07 1.3e-07 2.85e-07 5.62e-06 5.26e-07 4.11e-07 3.62e-07 1.07e-06 6.79e-07 6.05e-08 2.46e-07
ENSG00000086015 MAST2 -252886 3.07e-07 1.83e-07 6.57e-08 2.01e-07 1.01e-07 1.03e-07 1.9e-07 5.21e-08 1.5e-07 6.08e-08 1.73e-07 1.31e-07 1.79e-07 8.42e-08 6.25e-08 7.49e-08 4.09e-08 2.56e-07 6.75e-08 4.2e-08 1.23e-07 1.56e-07 1.69e-07 3.42e-08 1.68e-07 1.14e-07 1.06e-07 9.65e-08 1.22e-07 9.88e-08 1.07e-07 3.72e-08 2.92e-08 8.56e-08 8.21e-08 3.95e-08 5.37e-08 9.03e-08 8.3e-08 3.07e-08 3.8e-08 1.6e-07 4.7e-08 1.99e-07 8.79e-08 8.31e-09 1.21e-07 4.26e-09 5.09e-08
ENSG00000117425 PTCH2 690848 2.6e-07 1.11e-07 3.41e-08 1.65e-07 1.03e-07 9.05e-08 1.36e-07 5.29e-08 1.32e-07 3.99e-08 1.59e-07 7.49e-08 1.2e-07 6.07e-08 4.77e-08 7.4e-08 5.15e-08 1.06e-07 4.91e-08 2.88e-08 1.03e-07 1.31e-07 1.31e-07 5.23e-08 1.33e-07 1.03e-07 1.12e-07 8.27e-08 1.05e-07 1.09e-07 9.5e-08 3.29e-08 2.6e-08 8.09e-08 1.03e-07 4.23e-08 4.7e-08 8.28e-08 8.39e-08 3.87e-08 3.31e-08 1.42e-07 4.33e-08 1.13e-08 1.15e-07 1.83e-08 1.5e-07 4.96e-09 4.72e-08
ENSG00000117450 PRDX1 11054 7.44e-05 2.06e-05 2.53e-06 1.13e-05 2.34e-06 6.21e-06 2.53e-05 1.26e-06 1.41e-05 5.73e-06 1.59e-05 5.74e-06 2.49e-05 4.54e-06 3.33e-06 9.02e-06 5.31e-06 1.7e-05 3.2e-06 3.14e-06 8.17e-06 2.5e-05 1.82e-05 4.71e-06 1.87e-05 4.58e-06 6.12e-06 6.14e-06 1.78e-05 1.08e-05 7.81e-06 9.91e-07 1.19e-06 3.68e-06 6.02e-06 2.65e-06 1.77e-06 1.99e-06 1.63e-06 9.95e-07 9.4e-07 4.48e-05 2.71e-06 3.55e-07 1.02e-06 2.68e-06 3.39e-06 4.25e-07 4.66e-07
ENSG00000117481 NSUN4 -806076 2.56e-07 1.11e-07 3.41e-08 1.66e-07 1.03e-07 9.14e-08 1.31e-07 5.29e-08 1.32e-07 3.99e-08 1.59e-07 7.49e-08 1.2e-07 6.1e-08 4.48e-08 7.4e-08 5.2e-08 1.02e-07 4.91e-08 2.93e-08 1.03e-07 1.31e-07 1.31e-07 5.23e-08 1.32e-07 1.03e-07 1.12e-07 8.27e-08 1.04e-07 1.09e-07 9.43e-08 3.29e-08 2.6e-08 8.09e-08 1.06e-07 4.32e-08 4.01e-08 8.48e-08 8.39e-08 3.96e-08 2.6e-08 1.42e-07 4.51e-08 2.55e-08 1.15e-07 1.83e-08 1.47e-07 4.96e-09 4.72e-08
ENSG00000132773 TOE1 194049 5.59e-07 4.93e-07 1.5e-07 2.53e-07 1.1e-07 2.01e-07 3.42e-07 5.49e-08 2.01e-07 1.11e-07 2.18e-07 2.55e-07 3.6e-07 1.52e-07 1.01e-07 9.48e-08 5.73e-08 4.11e-07 8e-08 4.89e-08 1.91e-07 2.76e-07 2.63e-07 3.4e-08 2.86e-07 1.31e-07 1.17e-07 1.17e-07 1.48e-07 1.58e-07 1.59e-07 3.95e-08 3.89e-08 1.02e-07 3.12e-08 2.79e-08 5.02e-08 6.11e-08 6.56e-08 3.55e-08 4.19e-08 3.26e-07 4.83e-08 1.6e-07 5.59e-08 1.95e-08 7.26e-08 3.86e-09 4.99e-08
ENSG00000132780 NASP -49745 4.99e-06 4.88e-06 8.7e-07 2.56e-06 4.65e-07 1.63e-06 2.77e-06 2.68e-07 1.91e-06 7.42e-07 2.61e-06 3.43e-06 4.08e-06 2.37e-06 1.31e-06 1.38e-06 1.55e-06 3.83e-06 7.93e-07 5.47e-07 2.67e-06 4.73e-06 2.67e-06 1.02e-06 4.06e-06 9.87e-07 1.12e-06 1.65e-06 2.99e-06 2.49e-06 1.94e-06 6.31e-08 3.72e-07 1.33e-06 1.56e-06 6.2e-07 7.83e-07 3.84e-07 4.18e-07 4.09e-08 1.85e-07 4.63e-06 3.83e-07 4.26e-07 3.14e-07 1.16e-06 8.67e-07 2.77e-08 1.55e-07
ENSG00000159588 CCDC17 -89956 1.49e-06 2.09e-06 4.43e-07 1.27e-06 1.78e-07 7.16e-07 1.53e-06 6.57e-08 1.39e-06 3.76e-07 1.52e-06 1.15e-06 2.27e-06 1.02e-06 4.59e-07 7.41e-07 8.89e-07 1.93e-06 8.26e-07 3.34e-07 6.57e-07 2.07e-06 8.94e-07 4.44e-07 2.29e-06 2.44e-07 6.16e-07 7.19e-07 1.46e-06 1.2e-06 6.78e-07 4.23e-08 1.05e-07 6.99e-07 4.28e-07 2.99e-07 4.77e-07 1.46e-07 6.29e-08 8.3e-08 4.73e-08 1.62e-06 1.37e-07 3.6e-07 1.33e-07 3.32e-07 2.26e-07 2.25e-08 6.46e-08
ENSG00000159592 \N -154012 9.39e-07 8.5e-07 3.45e-07 3.81e-07 1.05e-07 3.12e-07 5.54e-07 5.19e-08 3.66e-07 1.89e-07 4.74e-07 4.75e-07 7.36e-07 2.54e-07 3.16e-07 1.75e-07 2.34e-07 5.71e-07 1.93e-07 6.29e-08 2.54e-07 5.49e-07 4.12e-07 4.91e-08 6.59e-07 1.9e-07 1.39e-07 1.86e-07 3.43e-07 3.3e-07 2.73e-07 4.22e-08 4.37e-08 1.23e-07 1.16e-07 5.32e-08 9.9e-08 7.98e-08 6.67e-08 3.92e-08 3.57e-08 6.81e-07 2.32e-08 1.68e-07 3.4e-08 7.03e-08 1.11e-07 1.93e-09 4.97e-08
ENSG00000159596 TMEM69 -154080 9.39e-07 8.5e-07 3.45e-07 3.81e-07 1.05e-07 3.12e-07 5.54e-07 5.19e-08 3.66e-07 1.89e-07 4.74e-07 4.75e-07 7.36e-07 2.54e-07 3.16e-07 1.75e-07 2.34e-07 5.71e-07 1.93e-07 6.29e-08 2.54e-07 5.36e-07 4.12e-07 4.91e-08 6.59e-07 1.9e-07 1.39e-07 1.86e-07 3.43e-07 3.3e-07 2.73e-07 4.22e-08 3.74e-08 1.23e-07 1.16e-07 5.32e-08 9.77e-08 7.98e-08 6.67e-08 3.92e-08 3.57e-08 6.81e-07 2.32e-08 1.68e-07 3.4e-08 7.03e-08 1.11e-07 1.93e-09 4.97e-08
ENSG00000173660 \N -769597 2.56e-07 1.11e-07 3.41e-08 1.65e-07 1.03e-07 9.14e-08 1.31e-07 5.29e-08 1.32e-07 3.99e-08 1.59e-07 7.49e-08 1.2e-07 6.1e-08 4.48e-08 7.4e-08 5.2e-08 1.02e-07 4.91e-08 2.93e-08 1.03e-07 1.31e-07 1.31e-07 5.23e-08 1.33e-07 1.03e-07 1.12e-07 8.27e-08 1.04e-07 1.09e-07 9.43e-08 3.29e-08 2.6e-08 8.09e-08 1.03e-07 4.23e-08 4.7e-08 8.28e-08 8.39e-08 3.87e-08 2.6e-08 1.42e-07 4.51e-08 1.91e-08 1.15e-07 1.83e-08 1.5e-07 4.96e-09 4.72e-08
ENSG00000225721 AL592166.1 758291 2.56e-07 1.11e-07 3.41e-08 1.65e-07 1.03e-07 9.05e-08 1.31e-07 5.29e-08 1.32e-07 3.99e-08 1.59e-07 7.49e-08 1.2e-07 6.1e-08 4.48e-08 7.4e-08 5.2e-08 1.02e-07 4.91e-08 2.93e-08 1.03e-07 1.31e-07 1.31e-07 5.23e-08 1.33e-07 1.03e-07 1.12e-07 8.27e-08 1.04e-07 1.09e-07 9.43e-08 3.29e-08 2.6e-08 8.09e-08 1.03e-07 4.23e-08 4.7e-08 8.28e-08 8.39e-08 3.87e-08 2.6e-08 1.42e-07 4.51e-08 1.76e-08 1.15e-07 1.83e-08 1.5e-07 4.96e-09 4.72e-08
ENSG00000280670 CCDC163 34022 7.94e-06 6.73e-06 7.29e-07 3.5e-06 4.72e-07 1.53e-06 6.11e-06 3.68e-07 3.17e-06 1.4e-06 4.1e-06 3.49e-06 7.71e-06 1.75e-06 1.04e-06 2.3e-06 1.87e-06 3.77e-06 1.44e-06 1.13e-06 2.82e-06 7.57e-06 3.54e-06 1.87e-06 5.12e-06 1.13e-06 1.47e-06 1.37e-06 4.19e-06 4.13e-06 2.01e-06 5.02e-08 6.45e-07 1.71e-06 2.15e-06 9.92e-07 9.41e-07 3.79e-07 6.03e-07 2.98e-07 2.71e-07 8.12e-06 6.52e-07 4.67e-07 3.51e-07 9.43e-07 1.02e-06 1.57e-07 2.22e-07
ENSG00000281912 \N 230191 3.53e-07 2.56e-07 8.67e-08 2.2e-07 1.03e-07 1.26e-07 2.24e-07 5.21e-08 1.59e-07 7.6e-08 1.63e-07 1.57e-07 2.24e-07 9.48e-08 5.36e-08 7.97e-08 4.31e-08 3.02e-07 7.09e-08 4.45e-08 1.35e-07 1.9e-07 1.86e-07 2.93e-08 2.02e-07 1.25e-07 1.07e-07 9.92e-08 1.34e-07 1.06e-07 1.21e-07 3.95e-08 3.28e-08 9.3e-08 6.67e-08 3.2e-08 5.65e-08 8.25e-08 7.63e-08 3.01e-08 3.34e-08 1.79e-07 5.2e-08 1.96e-07 8.03e-08 1.01e-08 1.2e-07 4.14e-09 4.79e-08