Genes within 1Mb (chr1:45528241:G:A):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000070759 TESK2 37078 eQTL 2.66e-34 -0.181 0.0142 0.0 0.0 0.372
ENSG00000086015 MAST2 -258746 eQTL 2.54e-10 0.127 0.0199 0.0 0.0 0.372
ENSG00000117450 PRDX1 5194 eQTL 7.08e-01 -0.00445 0.0119 0.00122 0.0 0.372
ENSG00000117461 PIK3R3 -604795 eQTL 1.39e-18 0.18 0.02 0.0 0.0 0.372
ENSG00000117481 NSUN4 -811936 eQTL 8.41e-04 -0.0836 0.025 0.0 0.0 0.372
ENSG00000126088 UROD 517291 pQTL 2.76e-02 -0.0326 0.0148 0.0 0.0 0.364
ENSG00000132781 MUTYH 187771 eQTL 2.06e-02 -0.0314 0.0135 0.0 0.0 0.372
ENSG00000159588 CCDC17 -95816 eQTL 2.62e-11 0.0965 0.0143 0.0 0.0 0.372
ENSG00000159592 GPBP1L1 -159872 eQTL 1.04e-02 0.0282 0.011 0.0 0.0 0.372
ENSG00000159596 TMEM69 -159940 eQTL 1.24e-14 0.172 0.022 0.0 0.0 0.372
ENSG00000197429 IPP -222409 eQTL 1.90e-03 0.0649 0.0208 0.0 0.0 0.372
ENSG00000225447 RPS15AP10 -117956 eQTL 2.56e-12 -0.238 0.0336 0.0 0.0 0.372
ENSG00000230896 AL604028.1 -168834 eQTL 3.20e-02 0.0836 0.0389 0.0 0.0 0.372
ENSG00000234329 AL604028.2 -123585 eQTL 7.62e-34 -0.299 0.0237 0.0 0.0 0.372
ENSG00000280670 CCDC163 28162 eQTL 1.56e-06 -0.183 0.0378 0.0 0.0 0.372


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000070759 TESK2 37078 2.78e-05 2.67e-05 4.95e-06 1.34e-05 4.21e-06 1.04e-05 3.31e-05 3.67e-06 2.22e-05 1.12e-05 3.11e-05 1.13e-05 3.69e-05 9.95e-06 5.6e-06 1.39e-05 1.2e-05 1.98e-05 6.14e-06 5.52e-06 1.11e-05 2.55e-05 2.5e-05 6.81e-06 3.51e-05 6.4e-06 1.06e-05 9.24e-06 2.5e-05 2.03e-05 1.39e-05 1.54e-06 2.21e-06 5.89e-06 9.6e-06 4.56e-06 2.73e-06 2.98e-06 3.48e-06 2.49e-06 1.66e-06 2.9e-05 2.8e-06 2.86e-07 2.19e-06 2.97e-06 3.36e-06 1.45e-06 1.38e-06
ENSG00000086015 MAST2 -258746 1.23e-06 1.58e-06 3.43e-07 1.2e-06 3.23e-07 5.09e-07 1.63e-06 3.49e-07 1.11e-06 3.89e-07 1.84e-06 5.98e-07 1.98e-06 2.7e-07 5.51e-07 8.12e-07 8.85e-07 8.55e-07 8.13e-07 6.56e-07 8.02e-07 1.63e-06 8.37e-07 6.51e-07 2.28e-06 4.23e-07 7.6e-07 7.16e-07 1.3e-06 1.25e-06 6.16e-07 2.96e-07 2.66e-07 6.38e-07 5.41e-07 4.74e-07 7.58e-07 2.42e-07 2.56e-07 4.07e-08 1.85e-07 1.55e-06 1.53e-07 1.28e-08 3.45e-07 6.12e-08 1.8e-07 2.44e-07 1.34e-07
ENSG00000117461 PIK3R3 -604795 2.67e-07 1.36e-07 3.72e-08 1.82e-07 9.21e-08 9.65e-08 1.44e-07 5.33e-08 1.41e-07 4.4e-08 1.62e-07 7.78e-08 1.41e-07 6.56e-08 5.99e-08 7.37e-08 3.93e-08 1.27e-07 5.82e-08 4.04e-08 1.22e-07 1.23e-07 1.39e-07 3.49e-08 1.37e-07 1.16e-07 1.11e-07 9.36e-08 1.05e-07 1.1e-07 9.91e-08 3.87e-08 3.59e-08 8.68e-08 8.76e-08 3.49e-08 5.61e-08 9.3e-08 6.54e-08 3.98e-08 4.76e-08 1.33e-07 4.7e-08 1.11e-08 3.3e-08 1.68e-08 1.24e-07 2.05e-09 5.02e-08
ENSG00000132780 \N -55605 1.65e-05 2.03e-05 3.02e-06 1.06e-05 2.75e-06 6.86e-06 2.18e-05 2.9e-06 1.62e-05 7.46e-06 2.18e-05 7.65e-06 2.69e-05 6.04e-06 4.47e-06 9.83e-06 8.14e-06 1.32e-05 4.02e-06 4.28e-06 7.89e-06 1.7e-05 1.74e-05 4.81e-06 2.66e-05 5.37e-06 7.99e-06 6.92e-06 1.72e-05 1.5e-05 1.05e-05 1.24e-06 1.38e-06 4.07e-06 7.16e-06 3.63e-06 1.95e-06 2.6e-06 2.18e-06 1.34e-06 1.14e-06 2e-05 2.47e-06 1.88e-07 1.84e-06 2.35e-06 2.08e-06 1.35e-06 6.66e-07
ENSG00000132781 MUTYH 187771 3.24e-06 4.68e-06 4.62e-07 1.94e-06 4.91e-07 7.74e-07 2.29e-06 5.79e-07 1.8e-06 8.25e-07 3.01e-06 1.29e-06 3.5e-06 1.43e-06 8.59e-07 1.61e-06 1.56e-06 2.09e-06 1.22e-06 1.23e-06 1.4e-06 3.17e-06 2.62e-06 1.1e-06 4.06e-06 1.1e-06 1.39e-06 1.81e-06 2.61e-06 2.11e-06 1.82e-06 5.93e-07 6.2e-07 1.24e-06 1.27e-06 9.73e-07 9.21e-07 4.21e-07 7.27e-07 2.32e-07 3.58e-07 3.37e-06 6.52e-07 1.38e-07 3.99e-07 3.28e-07 4.03e-07 4.11e-07 1.53e-07
ENSG00000159588 CCDC17 -95816 9.84e-06 1.24e-05 1.35e-06 6.16e-06 2.19e-06 4.14e-06 1.04e-05 1.8e-06 8.69e-06 4.73e-06 1.24e-05 4.89e-06 1.36e-05 3.95e-06 2.21e-06 6.64e-06 4.09e-06 6.61e-06 2.63e-06 2.85e-06 4.97e-06 9.58e-06 8.08e-06 2.98e-06 1.31e-05 3.55e-06 4.9e-06 3.68e-06 9.77e-06 7.93e-06 4.95e-06 1.05e-06 1.19e-06 2.93e-06 4.23e-06 2.22e-06 1.83e-06 1.87e-06 1.35e-06 8.28e-07 7.83e-07 1.23e-05 1.39e-06 1.55e-07 8.03e-07 1.29e-06 9.55e-07 6.86e-07 5.09e-07
ENSG00000159596 TMEM69 -159940 4.51e-06 5.49e-06 8.49e-07 2.95e-06 8.92e-07 1.27e-06 3.49e-06 1e-06 3.25e-06 1.67e-06 4.89e-06 2.52e-06 6.78e-06 1.54e-06 1.25e-06 2.67e-06 2.06e-06 2.88e-06 1.32e-06 1.02e-06 2.77e-06 4.53e-06 3.72e-06 1.85e-06 5.14e-06 1.33e-06 2.2e-06 1.55e-06 4.26e-06 3.81e-06 1.96e-06 4.18e-07 7.52e-07 1.8e-06 1.94e-06 9.25e-07 9.76e-07 5.28e-07 1.28e-06 4.35e-07 1.51e-07 5.19e-06 3.82e-07 1.99e-07 6.1e-07 3.42e-07 8.09e-07 6.71e-07 3.35e-07
ENSG00000162415 \N 222032 1.61e-06 2.56e-06 2.54e-07 1.51e-06 4.25e-07 6.45e-07 1.22e-06 3.99e-07 1.66e-06 5.89e-07 1.82e-06 9.29e-07 2.59e-06 3.9e-07 4.14e-07 1.03e-06 1.05e-06 1.36e-06 5.59e-07 7.64e-07 6.36e-07 1.99e-06 1.63e-06 6.81e-07 2.44e-06 8.82e-07 1.01e-06 1.01e-06 1.7e-06 1.37e-06 8.83e-07 3.05e-07 3.79e-07 5.48e-07 6.64e-07 6.2e-07 8.32e-07 3.3e-07 4.78e-07 3.08e-07 3.05e-07 2.22e-06 4.36e-07 4.22e-08 3.22e-07 1.19e-07 2.16e-07 2.02e-07 2.79e-07
ENSG00000225447 RPS15AP10 -117956 7.55e-06 9.29e-06 9.7e-07 4.36e-06 1.56e-06 2.59e-06 9.36e-06 1.24e-06 5.17e-06 3.16e-06 9.41e-06 2.94e-06 1.1e-05 2.85e-06 1.05e-06 4.71e-06 3.7e-06 3.81e-06 1.65e-06 2.44e-06 3.41e-06 7.66e-06 6.17e-06 2.06e-06 9.79e-06 2.35e-06 3.58e-06 2.27e-06 6.95e-06 7.18e-06 3.46e-06 8.1e-07 7.99e-07 2.34e-06 2.5e-06 1.61e-06 1.44e-06 9.57e-07 8.54e-07 5e-07 5.18e-07 8.16e-06 9.07e-07 1.69e-07 6.99e-07 1.13e-06 1.13e-06 7.8e-07 5.85e-07
ENSG00000234329 AL604028.2 -123585 6.67e-06 9.52e-06 7.41e-07 4e-06 1.6e-06 2.09e-06 8.7e-06 1.15e-06 4.76e-06 2.84e-06 8.95e-06 2.79e-06 1.02e-05 2.24e-06 9.55e-07 4.58e-06 3e-06 3.86e-06 1.57e-06 2.11e-06 3.02e-06 7.46e-06 5.53e-06 1.93e-06 9.25e-06 2.29e-06 3.25e-06 1.9e-06 6.54e-06 6.66e-06 3.29e-06 7.78e-07 8.03e-07 2.19e-06 2.22e-06 1.38e-06 1.38e-06 5.07e-07 8.13e-07 4.57e-07 4.48e-07 8.33e-06 7.85e-07 1.8e-07 6.7e-07 1.32e-06 1.01e-06 7.67e-07 5.44e-07
ENSG00000280670 CCDC163 28162 3.44e-05 3.04e-05 6.07e-06 1.51e-05 5.65e-06 1.34e-05 4.1e-05 4.44e-06 2.82e-05 1.44e-05 3.73e-05 1.56e-05 4.4e-05 1.28e-05 6.45e-06 1.77e-05 1.53e-05 2.41e-05 7.56e-06 6.6e-06 1.41e-05 3.13e-05 2.99e-05 8.51e-06 4.2e-05 7.81e-06 1.35e-05 1.18e-05 3.01e-05 2.4e-05 1.76e-05 1.64e-06 2.53e-06 6.95e-06 1.14e-05 5.45e-06 3.2e-06 3.15e-06 4.35e-06 3.14e-06 1.71e-06 3.49e-05 3.46e-06 3.63e-07 2.66e-06 3.67e-06 3.97e-06 1.64e-06 1.52e-06