Genes within 1Mb (chr1:45511192:G:A):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000070759 TESK2 20029 eQTL 1.50e-02 0.0922 0.0378 0.0 0.0 0.0402
ENSG00000086015 MAST2 -275795 eQTL 4.62e-05 -0.203 0.0496 0.0 0.0 0.0402
ENSG00000117448 AKR1A1 -39351 eQTL 3.76e-02 0.0595 0.0286 0.0 0.0 0.0402
ENSG00000117450 PRDX1 -11855 eQTL 3.34e-02 0.0624 0.0293 0.0 0.0 0.0402
ENSG00000117461 PIK3R3 -621844 eQTL 2.49e-03 -0.155 0.0511 0.0 0.0 0.0402
ENSG00000132128 LRRC41 -792416 eQTL 1.88e-02 0.102 0.0434 0.00127 0.0 0.0402
ENSG00000197429 IPP -239458 eQTL 5.47e-03 -0.143 0.0514 0.0 0.0 0.0402
ENSG00000225447 RPS15AP10 -135005 eQTL 2.02e-03 0.262 0.0845 0.0 0.0 0.0402
ENSG00000234329 AL604028.2 -140634 eQTL 8.68e-05 0.247 0.0626 0.0 0.0 0.0402
ENSG00000280670 CCDC163 11113 eQTL 8.76e-03 -0.247 0.0941 0.00127 0.0 0.0402


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000117425 \N 667939 2.6e-07 1.11e-07 3.28e-08 1.65e-07 1.03e-07 9.05e-08 1.36e-07 5.29e-08 1.32e-07 3.99e-08 1.59e-07 7.49e-08 1.2e-07 6.1e-08 4.77e-08 7.76e-08 5.15e-08 1.06e-07 5.12e-08 2.88e-08 1.03e-07 1.31e-07 1.31e-07 5.23e-08 1.33e-07 1.03e-07 1.12e-07 8.27e-08 1.05e-07 1.09e-07 9.43e-08 3.19e-08 2.75e-08 8.26e-08 9.88e-08 4.23e-08 4.7e-08 8.28e-08 8.44e-08 3.87e-08 3.71e-08 1.42e-07 4.51e-08 0.0 1.15e-07 1.83e-08 1.5e-07 4.96e-09 4.72e-08
ENSG00000117450 PRDX1 -11855 0.000115 0.000104 3.13e-05 3.38e-05 2.37e-05 3.75e-05 0.000104 1.05e-05 7.79e-05 4.23e-05 0.000129 3.08e-05 0.000181 3.48e-05 2.49e-05 5.28e-05 4.69e-05 6.97e-05 2.64e-05 2.27e-05 4.22e-05 0.000113 9.24e-05 3.15e-05 0.000108 2.44e-05 4.08e-05 3.07e-05 0.000108 3.51e-05 4.71e-05 7.48e-06 5.28e-06 1.9e-05 2.46e-05 1.75e-05 8.71e-06 9.89e-06 1.72e-05 5.94e-06 2.75e-06 0.000117 1.61e-05 1.42e-06 1.16e-05 2.58e-05 1.11e-05 1.13e-05 1.3e-05
ENSG00000132128 LRRC41 -792416 2.56e-07 1.16e-07 3.34e-08 1.66e-07 1.03e-07 9.14e-08 1.31e-07 5.29e-08 1.32e-07 3.99e-08 1.55e-07 7.4e-08 1.19e-07 6.1e-08 4.48e-08 7.4e-08 5.2e-08 1.02e-07 4.91e-08 2.93e-08 1.04e-07 1.31e-07 1.31e-07 5.23e-08 1.32e-07 1.03e-07 1.12e-07 8.27e-08 1.04e-07 1.08e-07 9.43e-08 3.29e-08 2.6e-08 8.09e-08 1.01e-07 4.23e-08 4.01e-08 8.48e-08 8.44e-08 3.87e-08 3.18e-08 1.42e-07 4.51e-08 0.0 1.15e-07 1.83e-08 1.47e-07 4.96e-09 4.72e-08
ENSG00000142959 \N 723022 2.56e-07 1.11e-07 3.28e-08 1.65e-07 1.03e-07 9.14e-08 1.36e-07 5.29e-08 1.32e-07 3.99e-08 1.59e-07 7.4e-08 1.2e-07 6.1e-08 4.77e-08 7.4e-08 5.15e-08 1.02e-07 4.91e-08 2.88e-08 1.04e-07 1.31e-07 1.31e-07 5.23e-08 1.33e-07 1.03e-07 1.12e-07 8.27e-08 1.04e-07 1.09e-07 9.43e-08 3.19e-08 2.75e-08 8e-08 1.01e-07 4.23e-08 4.7e-08 8.48e-08 8.44e-08 3.87e-08 3.07e-08 1.42e-07 4.34e-08 0.0 1.15e-07 1.83e-08 1.47e-07 4.96e-09 4.72e-08
ENSG00000225447 RPS15AP10 -135005 1.28e-06 1.01e-06 2.59e-07 1.26e-06 1.56e-07 8.48e-07 1.49e-06 2.65e-07 1.38e-06 4.32e-07 1.36e-06 1.15e-06 2.62e-06 8.3e-07 4.52e-07 7.78e-07 6.83e-07 1.17e-06 5.75e-07 4.25e-07 7.68e-07 1.97e-06 8.61e-07 2.29e-07 2.28e-06 5.38e-07 6.16e-07 4.98e-07 1.28e-06 1.18e-06 5.91e-07 3.31e-08 2.19e-07 1.12e-06 5.46e-07 4.42e-07 6.37e-07 3.44e-07 4.82e-07 2.91e-07 3e-07 1.64e-06 2.32e-07 1.29e-08 8.45e-08 3.22e-07 1.82e-07 2.72e-07 1.56e-07
ENSG00000234329 AL604028.2 -140634 1.2e-06 9.3e-07 2.93e-07 1.27e-06 1.16e-07 7.92e-07 1.52e-06 2.66e-07 1.46e-06 3.83e-07 1.24e-06 9.11e-07 2.73e-06 5.76e-07 4.95e-07 7e-07 6.07e-07 1.09e-06 7.04e-07 3.42e-07 6.13e-07 1.89e-06 8.76e-07 1.8e-07 2.05e-06 4.36e-07 5.49e-07 4.71e-07 1.23e-06 1.08e-06 5.45e-07 5.35e-08 2.29e-07 8.95e-07 5.39e-07 4.67e-07 5.31e-07 3.23e-07 5.18e-07 2.65e-07 2.75e-07 1.49e-06 1.14e-07 1.23e-08 6.21e-08 3.33e-07 1.45e-07 2.07e-07 2.13e-07