Genes within 1Mb (chr1:45506739:G:A):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000086015 MAST2 -280248 eQTL 5.28e-14 0.355 0.0464 0.0 0.0 0.0422
ENSG00000117425 PTCH2 663486 eQTL 1.77e-02 0.136 0.0573 0.0 0.0 0.0422
ENSG00000126088 UROD 495789 pQTL 3.06e-04 0.132 0.0363 0.0 0.0 0.0408
ENSG00000126088 UROD 495789 eQTL 3.26e-02 0.108 0.0504 0.0 0.0 0.0422
ENSG00000126106 TMEM53 832258 eQTL 4.79e-02 0.124 0.0626 0.0 0.0 0.0422
ENSG00000132773 TOE1 166687 eQTL 4.19e-03 -0.092 0.0321 0.00103 0.0 0.0422
ENSG00000132780 NASP -77107 eQTL 2.45e-09 -0.232 0.0385 0.0 0.0 0.0422
ENSG00000159588 CCDC17 -117318 eQTL 1.36e-15 -0.271 0.0333 0.0 0.0 0.0422
ENSG00000159592 GPBP1L1 -181374 eQTL 1.39e-02 0.0638 0.0259 0.0 0.0 0.0422
ENSG00000162415 ZSWIM5 200530 eQTL 7.23e-03 -0.137 0.0508 0.0 0.0 0.0422
ENSG00000197429 IPP -243911 eQTL 9.31e-03 -0.128 0.0492 0.0 0.0 0.0422
ENSG00000222009 BTBD19 698257 eQTL 1.95e-03 -0.11 0.0356 0.0 0.0 0.0422
ENSG00000232022 FAAHP1 -925390 eQTL 7.18e-03 -0.195 0.0724 0.00146 0.0 0.0422
ENSG00000234329 AL604028.2 -145087 eQTL 2.44e-02 -0.136 0.0602 0.0 0.0 0.0422
ENSG00000281912 LINC01144 202829 eQTL 2.73e-03 0.244 0.0813 0.0 0.0 0.0422


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000070759 \N 15576 1.83e-05 2.19e-05 3.89e-06 1.2e-05 3.33e-06 8.94e-06 2.59e-05 3.36e-06 1.84e-05 9.45e-06 2.31e-05 8.87e-06 3.13e-05 8.5e-06 5.26e-06 1.03e-05 1.07e-05 1.6e-05 5.66e-06 4.78e-06 9.31e-06 1.97e-05 1.87e-05 5.76e-06 3.04e-05 5.52e-06 7.99e-06 7.75e-06 1.89e-05 1.89e-05 1.29e-05 1.24e-06 1.81e-06 4.87e-06 7.8e-06 4.46e-06 2.04e-06 2.83e-06 3.44e-06 2.49e-06 1.48e-06 2.49e-05 2.68e-06 2.69e-07 1.88e-06 2.74e-06 3.07e-06 1.24e-06 1.3e-06
ENSG00000086015 MAST2 -280248 1.26e-06 9.01e-07 1.27e-07 6.06e-07 1.11e-07 3.08e-07 7.53e-07 2.07e-07 8.08e-07 3.1e-07 1.09e-06 5.22e-07 1.34e-06 2.29e-07 3.86e-07 2.89e-07 5.64e-07 4.31e-07 2.88e-07 2.65e-07 2.52e-07 5.49e-07 4.77e-07 2.65e-07 1.57e-06 2.56e-07 4.97e-07 3.51e-07 5.43e-07 8.43e-07 4.34e-07 6.42e-08 5.3e-08 2.46e-07 3.6e-07 2.13e-07 1.93e-07 1.36e-07 1.23e-07 3.03e-08 2.39e-07 1.08e-06 5.65e-08 1.62e-08 1.94e-07 4.23e-08 1.26e-07 1.2e-08 4.97e-08
ENSG00000117425 PTCH2 663486 2.67e-07 1.27e-07 3.72e-08 1.89e-07 9.01e-08 1e-07 1.53e-07 5.19e-08 1.44e-07 4.57e-08 1.62e-07 8.36e-08 1.45e-07 6.56e-08 5.99e-08 7.26e-08 3.98e-08 1.18e-07 5.36e-08 4e-08 1.05e-07 1.27e-07 1.34e-07 3.68e-08 1.4e-07 1.16e-07 1.07e-07 9.36e-08 1.08e-07 1.07e-07 9.64e-08 3.7e-08 3.3e-08 8.25e-08 5.99e-08 3.6e-08 5.37e-08 8.63e-08 6.63e-08 4.47e-08 5.42e-08 1.36e-07 5.21e-08 1.09e-08 4.25e-08 1.99e-08 1.24e-07 3.95e-09 4.79e-08
ENSG00000117448 \N -43804 8.9e-06 9.82e-06 1.29e-06 5.82e-06 2.36e-06 4.24e-06 1.02e-05 1.69e-06 8.5e-06 4.89e-06 1.08e-05 4.93e-06 1.31e-05 3.74e-06 2.59e-06 5.84e-06 4.36e-06 6.22e-06 2.58e-06 2.79e-06 4.72e-06 8.39e-06 7.07e-06 2.83e-06 1.3e-05 3.11e-06 4.55e-06 3.19e-06 8.25e-06 7.97e-06 5.24e-06 5.43e-07 1.1e-06 2.86e-06 3.75e-06 2.19e-06 1.55e-06 1.82e-06 1.72e-06 1e-06 8.78e-07 1.24e-05 1.47e-06 1.68e-07 6.85e-07 1.61e-06 1.09e-06 6.46e-07 4.49e-07
ENSG00000126088 UROD 495789 3.53e-07 1.78e-07 5.35e-08 2.49e-07 9.8e-08 8.63e-08 2.24e-07 5.85e-08 1.54e-07 6.75e-08 1.61e-07 1.19e-07 2.38e-07 8.07e-08 5.43e-08 7.23e-08 4.18e-08 1.51e-07 7.12e-08 5.46e-08 1.25e-07 1.42e-07 1.58e-07 3.22e-08 2.17e-07 1.23e-07 1.2e-07 1.04e-07 1.31e-07 1.05e-07 1.09e-07 3.54e-08 3.68e-08 9.08e-08 6.25e-08 2.85e-08 4.47e-08 7.25e-08 6.29e-08 6.92e-08 4.07e-08 1.59e-07 3.18e-08 1.44e-08 3.48e-08 1.19e-08 1.11e-07 1.89e-09 5.04e-08
ENSG00000132773 TOE1 166687 1.91e-06 2.43e-06 2.43e-07 1.74e-06 4.18e-07 6.74e-07 1.29e-06 3.86e-07 1.73e-06 6.94e-07 1.9e-06 1.26e-06 2.89e-06 8.94e-07 3.34e-07 9.51e-07 1.07e-06 1.08e-06 5.9e-07 4.58e-07 7.79e-07 1.93e-06 1.42e-06 5.73e-07 2.57e-06 7.46e-07 1e-06 8.64e-07 1.66e-06 1.46e-06 7.56e-07 2.08e-07 2.77e-07 6.21e-07 9.25e-07 5.24e-07 6.87e-07 3.3e-07 5.35e-07 2.33e-07 3.59e-07 2.51e-06 4.31e-07 8.08e-08 2.98e-07 2.74e-07 2.7e-07 5.35e-08 1.71e-07
ENSG00000132780 NASP -77107 5.22e-06 5.79e-06 8.35e-07 3.51e-06 1.59e-06 1.54e-06 5.6e-06 9.99e-07 4.91e-06 2.5e-06 5.94e-06 3.32e-06 7.69e-06 1.89e-06 1.1e-06 3.22e-06 1.92e-06 3.49e-06 1.54e-06 1.14e-06 2.96e-06 4.91e-06 4.57e-06 1.39e-06 8.14e-06 1.74e-06 2.42e-06 1.73e-06 4.53e-06 4.67e-06 2.76e-06 5.93e-07 5.9e-07 1.49e-06 1.93e-06 1.04e-06 9.56e-07 4.51e-07 8.09e-07 5.17e-07 4.57e-07 6.66e-06 6.31e-07 1.8e-07 4.33e-07 9.82e-07 8.39e-07 2.11e-07 3.9e-07
ENSG00000159588 CCDC17 -117318 4e-06 4.13e-06 3e-07 2.46e-06 6.82e-07 7.84e-07 2.49e-06 8.2e-07 2.36e-06 1.18e-06 3e-06 1.66e-06 5.05e-06 1.35e-06 9.35e-07 1.52e-06 1.54e-06 2.22e-06 1.38e-06 1.44e-06 1.15e-06 3.2e-06 2.77e-06 9.71e-07 4.53e-06 1.26e-06 1.44e-06 1.79e-06 2.54e-06 2.65e-06 1.91e-06 2.48e-07 5.05e-07 1.31e-06 1.87e-06 9.75e-07 8.21e-07 4.49e-07 1.35e-06 3.46e-07 2.11e-07 4.03e-06 5.11e-07 1.91e-07 3.99e-07 4.01e-07 6.08e-07 2.7e-07 2.01e-07
ENSG00000159592 GPBP1L1 -181374 1.59e-06 2.15e-06 3.14e-07 1.49e-06 3.75e-07 6.68e-07 1.35e-06 3.96e-07 1.75e-06 6.07e-07 2.04e-06 9.17e-07 2.56e-06 5.72e-07 4.26e-07 9.19e-07 1.03e-06 9.05e-07 7.7e-07 5.08e-07 7.72e-07 1.91e-06 1.12e-06 5.17e-07 2.43e-06 6.17e-07 1.06e-06 9.36e-07 1.63e-06 1.31e-06 8.3e-07 1.59e-07 2.54e-07 5.62e-07 8.07e-07 4.57e-07 6.8e-07 3.59e-07 5.13e-07 2.05e-07 3.67e-07 2.12e-06 3.34e-07 6.41e-08 1.9e-07 2.17e-07 2.37e-07 8.87e-08 1.25e-07
ENSG00000162415 ZSWIM5 200530 1.38e-06 1.36e-06 3.25e-07 1.3e-06 3.57e-07 5.83e-07 1.5e-06 3.85e-07 1.38e-06 4.7e-07 1.88e-06 7.43e-07 2.53e-06 3.31e-07 5.39e-07 8.11e-07 8.89e-07 6.91e-07 8.41e-07 6.36e-07 4.57e-07 1.59e-06 8.92e-07 6.57e-07 2.38e-06 4.11e-07 9.48e-07 7.08e-07 1.32e-06 1.2e-06 7.8e-07 5.06e-08 2e-07 6.61e-07 6.11e-07 4.49e-07 6.19e-07 2.79e-07 4.8e-07 3.21e-07 2.81e-07 1.66e-06 2.32e-07 3.39e-08 1.88e-07 1.11e-07 2.3e-07 8.51e-08 8.37e-08
ENSG00000281912 LINC01144 202829 1.34e-06 1.3e-06 3.08e-07 1.25e-06 3.51e-07 5.98e-07 1.5e-06 3.69e-07 1.45e-06 4.52e-07 1.87e-06 7.32e-07 2.45e-06 3.26e-07 5.32e-07 7.78e-07 9.2e-07 6.8e-07 8.13e-07 6.4e-07 4.48e-07 1.63e-06 8.61e-07 6.51e-07 2.25e-06 3.87e-07 9.29e-07 7.16e-07 1.31e-06 1.22e-06 7.32e-07 4.99e-08 1.98e-07 6.68e-07 5.64e-07 4.42e-07 6.25e-07 2.88e-07 4.99e-07 3.32e-07 2.8e-07 1.62e-06 1.93e-07 2.71e-08 2.01e-07 1.2e-07 2.09e-07 8.35e-08 8.21e-08