Genes within 1Mb (chr1:45473022:C:T):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000086015 MAST2 -313965 eQTL 4.00e-13 0.348 0.0473 0.0 0.0 0.0412
ENSG00000117425 PTCH2 629769 eQTL 2.66e-02 0.13 0.0583 0.0 0.0 0.0412
ENSG00000117450 PRDX1 -50025 pQTL 4.57e-02 -0.0859 0.0429 0.0 0.0 0.0397
ENSG00000126088 UROD 462072 pQTL 5.63e-04 0.128 0.0369 0.0 0.0 0.0397
ENSG00000126088 UROD 462072 eQTL 3.10e-02 0.111 0.0512 0.0 0.0 0.0412
ENSG00000132773 TOE1 132970 eQTL 1.55e-03 -0.103 0.0326 0.00239 0.00218 0.0412
ENSG00000132780 NASP -110824 eQTL 2.29e-08 -0.221 0.0392 0.0 0.0 0.0412
ENSG00000159588 CCDC17 -151035 eQTL 1.69e-14 -0.265 0.034 0.0 0.0 0.0412
ENSG00000159592 GPBP1L1 -215091 eQTL 1.43e-02 0.0647 0.0264 0.0 0.0 0.0412
ENSG00000162415 ZSWIM5 166813 eQTL 7.54e-03 -0.138 0.0517 0.0 0.0 0.0412
ENSG00000197429 IPP -277628 eQTL 9.72e-03 -0.13 0.05 0.0 0.0 0.0412
ENSG00000222009 BTBD19 664540 eQTL 2.28e-03 -0.111 0.0362 0.0 0.0 0.0412
ENSG00000232022 FAAHP1 -959107 eQTL 9.71e-03 -0.191 0.0737 0.00118 0.0 0.0412
ENSG00000234329 AL604028.2 -178804 eQTL 1.13e-02 -0.155 0.0612 0.0 0.0 0.0412
ENSG00000281912 LINC01144 169112 eQTL 6.16e-03 0.227 0.0828 0.0 0.0 0.0412


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000070759 \N -18141 2.06e-05 2.22e-05 4.6e-06 1.31e-05 4.49e-06 1.1e-05 3.09e-05 3.76e-06 2.07e-05 1.09e-05 2.78e-05 1.08e-05 3.83e-05 9.29e-06 5.68e-06 1.3e-05 1.17e-05 1.92e-05 6.96e-06 6.43e-06 1.15e-05 2.31e-05 2.31e-05 8.69e-06 3.36e-05 6.28e-06 9.71e-06 8.99e-06 2.39e-05 2.59e-05 1.36e-05 1.62e-06 2.6e-06 7.08e-06 9.49e-06 5.68e-06 3.43e-06 3.17e-06 5.03e-06 3.56e-06 1.77e-06 2.84e-05 2.72e-06 4.31e-07 2.3e-06 3.29e-06 3.8e-06 1.6e-06 1.56e-06
ENSG00000086015 MAST2 -313965 1.29e-06 9.53e-07 3.48e-07 9.74e-07 3.36e-07 4.78e-07 1.6e-06 3.75e-07 1.49e-06 4.52e-07 1.76e-06 7e-07 2.15e-06 2.79e-07 5.35e-07 9.13e-07 8.37e-07 6.96e-07 7.02e-07 6.33e-07 6.12e-07 1.45e-06 8.53e-07 6.39e-07 2.24e-06 4.39e-07 8.98e-07 7.14e-07 1.37e-06 1.25e-06 7.03e-07 1.92e-07 2.19e-07 6.69e-07 5.8e-07 4.23e-07 5.19e-07 1.66e-07 3.74e-07 3.02e-07 2.82e-07 1.49e-06 5.77e-08 4.11e-08 2.16e-07 1.27e-07 2.33e-07 8.25e-08 1.18e-07
ENSG00000117425 PTCH2 629769 5.37e-07 2.5e-07 6.41e-08 2.54e-07 1.07e-07 1.19e-07 3.44e-07 7.46e-08 2.38e-07 1.39e-07 2.98e-07 2.09e-07 4.11e-07 8.42e-08 9.12e-08 1.26e-07 8.42e-08 2.83e-07 7.76e-08 8.31e-08 1.34e-07 2.24e-07 2.11e-07 5.01e-08 3.55e-07 1.94e-07 1.57e-07 1.68e-07 1.76e-07 1.85e-07 1.76e-07 5.08e-08 4.76e-08 1.03e-07 1.16e-07 5.04e-08 5.76e-08 6.32e-08 4.99e-08 8.61e-08 4.36e-08 2.43e-07 3.18e-08 1.07e-08 5.84e-08 1.03e-08 9.26e-08 0.0 4.68e-08
ENSG00000117448 \N -77521 7.25e-06 8.23e-06 1.04e-06 3.91e-06 2.27e-06 3.05e-06 9.71e-06 1.59e-06 6.09e-06 4.2e-06 9.18e-06 4.23e-06 1.14e-05 3.27e-06 1.73e-06 5.69e-06 3.82e-06 4.58e-06 2.38e-06 2.62e-06 4.24e-06 7.64e-06 6.69e-06 2.9e-06 1.08e-05 2.91e-06 4.22e-06 2.73e-06 7.5e-06 7.75e-06 4.12e-06 8.1e-07 1.14e-06 2.85e-06 2.8e-06 2.09e-06 1.72e-06 1.53e-06 1.61e-06 1.02e-06 9.83e-07 8.83e-06 9.1e-07 1.61e-07 7.16e-07 1.21e-06 1.06e-06 7.32e-07 5.05e-07
ENSG00000126088 UROD 462072 1.05e-06 6.46e-07 1.27e-07 4.29e-07 1.05e-07 2.42e-07 6.19e-07 1.76e-07 6.27e-07 2.81e-07 9.46e-07 4.75e-07 9.97e-07 1.6e-07 3.1e-07 2.99e-07 4.29e-07 4.16e-07 2.42e-07 1.9e-07 2.3e-07 4.81e-07 4.2e-07 2.27e-07 1.02e-06 2.57e-07 3.68e-07 3.24e-07 4.9e-07 6.19e-07 3.68e-07 5.71e-08 5.63e-08 1.71e-07 3.55e-07 1.49e-07 8.52e-08 9.71e-08 7.54e-08 2.26e-08 1.21e-07 6.8e-07 3.55e-08 1.92e-08 1.69e-07 1.39e-08 1.3e-07 1.26e-08 6.03e-08
ENSG00000132773 TOE1 132970 4.62e-06 4.67e-06 7.87e-07 2.42e-06 1.51e-06 1.35e-06 4.21e-06 9.78e-07 4.8e-06 2.17e-06 4.84e-06 3.46e-06 7.38e-06 2.04e-06 1.39e-06 3.13e-06 2.06e-06 3.19e-06 1.39e-06 1.02e-06 2.85e-06 4.49e-06 3.8e-06 1.44e-06 5.3e-06 1.65e-06 2.62e-06 1.65e-06 4.28e-06 4.14e-06 2.53e-06 5.58e-07 4.91e-07 1.47e-06 2.03e-06 9.53e-07 9.55e-07 4.6e-07 9.26e-07 3.71e-07 7.35e-07 5.47e-06 4.35e-07 1.81e-07 6.1e-07 5.87e-07 1.01e-06 4.41e-07 3.89e-07
ENSG00000132780 NASP -110824 5.1e-06 5.05e-06 7.1e-07 3.05e-06 1.67e-06 1.62e-06 6.35e-06 1.11e-06 5.06e-06 2.8e-06 6.12e-06 3.3e-06 7.83e-06 1.94e-06 1.13e-06 3.84e-06 1.84e-06 3.96e-06 1.47e-06 1.44e-06 2.89e-06 4.75e-06 4.64e-06 1.93e-06 7.87e-06 2.05e-06 2.22e-06 1.55e-06 4.95e-06 4.67e-06 2.85e-06 4.15e-07 6.95e-07 2.18e-06 2.07e-06 1.09e-06 1.05e-06 4.71e-07 9.69e-07 5.64e-07 8.2e-07 6.32e-06 4.37e-07 1.59e-07 7.74e-07 1.32e-06 1.14e-06 7.36e-07 5.14e-07
ENSG00000159588 CCDC17 -151035 4.27e-06 3.85e-06 6.66e-07 1.79e-06 1.1e-06 9.09e-07 2.91e-06 9.31e-07 3.25e-06 1.7e-06 4.08e-06 2.61e-06 6.49e-06 1.37e-06 1.26e-06 2.42e-06 1.74e-06 2.46e-06 1.45e-06 9.53e-07 1.9e-06 3.96e-06 3.53e-06 1.71e-06 4.77e-06 1.3e-06 1.9e-06 1.44e-06 4.15e-06 3.27e-06 2.05e-06 5.93e-07 7.93e-07 1.8e-06 1.79e-06 9.08e-07 9.3e-07 4.71e-07 1.19e-06 3.8e-07 5.44e-07 4.74e-06 4.77e-07 1.86e-07 4.06e-07 3.21e-07 7.12e-07 2.4e-07 3.35e-07
ENSG00000159592 GPBP1L1 -215091 2.18e-06 2.43e-06 2.88e-07 1.49e-06 4.49e-07 7.21e-07 1.52e-06 6.01e-07 1.74e-06 7.36e-07 1.93e-06 1.42e-06 3.44e-06 8.74e-07 5.46e-07 1.18e-06 9.51e-07 1.68e-06 5.95e-07 1.07e-06 7.78e-07 2.24e-06 1.94e-06 9.56e-07 2.73e-06 1.21e-06 1.19e-06 1.38e-06 1.88e-06 1.67e-06 1.18e-06 2.37e-07 4.47e-07 1.24e-06 9.18e-07 8.31e-07 7.69e-07 3.84e-07 9.25e-07 3.33e-07 1.96e-07 2.78e-06 4.15e-07 1.67e-07 3.21e-07 2.94e-07 4.95e-07 2.49e-07 2.25e-07
ENSG00000162415 ZSWIM5 166813 3.91e-06 3.09e-06 4.9e-07 1.94e-06 8.57e-07 8.37e-07 2.43e-06 1e-06 2.51e-06 1.43e-06 3.2e-06 1.9e-06 5.44e-06 1.36e-06 9.75e-07 2e-06 1.54e-06 2.13e-06 1.58e-06 1.2e-06 1.57e-06 3.44e-06 3.44e-06 1.82e-06 4.32e-06 1.21e-06 1.63e-06 1.71e-06 3.79e-06 2.55e-06 1.98e-06 4.56e-07 6.09e-07 1.61e-06 1.62e-06 9.54e-07 9.08e-07 3.61e-07 1.3e-06 3.27e-07 4.53e-07 3.84e-06 5.79e-07 1.93e-07 3.69e-07 3.6e-07 8.59e-07 2.32e-07 1.77e-07
ENSG00000281912 LINC01144 169112 3.75e-06 3.03e-06 4.5e-07 1.97e-06 8.7e-07 7.79e-07 2.53e-06 9.98e-07 2.51e-06 1.4e-06 3.13e-06 1.84e-06 5.21e-06 1.43e-06 9.15e-07 1.97e-06 1.58e-06 2.17e-06 1.57e-06 1.26e-06 1.5e-06 3.33e-06 3.36e-06 1.8e-06 4.19e-06 1.26e-06 1.57e-06 1.74e-06 3.55e-06 2.46e-06 1.91e-06 4.72e-07 5.88e-07 1.65e-06 1.65e-06 9.52e-07 9.41e-07 4.09e-07 1.31e-06 3.28e-07 4.26e-07 3.95e-06 5.92e-07 1.87e-07 4.29e-07 3.42e-07 8.74e-07 2.02e-07 1.76e-07