Genes within 1Mb (chr1:45464388:C:T):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000086015 MAST2 -322599 eQTL 4.00e-13 0.349 0.0474 0.0 0.0 0.0412
ENSG00000117425 PTCH2 621135 eQTL 2.64e-02 0.13 0.0584 0.0 0.0 0.0412
ENSG00000117450 PRDX1 -58659 pQTL 4.47e-02 -0.0863 0.043 0.0 0.0 0.0397
ENSG00000126088 UROD 453438 pQTL 5.34e-04 0.128 0.0369 0.0 0.0 0.0397
ENSG00000126088 UROD 453438 eQTL 3.07e-02 0.111 0.0513 0.0 0.0 0.0412
ENSG00000132773 TOE1 124336 eQTL 1.53e-03 -0.104 0.0326 0.00241 0.0022 0.0412
ENSG00000132780 NASP -119458 eQTL 2.26e-08 -0.221 0.0392 0.0 0.0 0.0412
ENSG00000159588 CCDC17 -159669 eQTL 1.71e-14 -0.265 0.034 0.0 0.0 0.0412
ENSG00000159592 GPBP1L1 -223725 eQTL 1.42e-02 0.0648 0.0264 0.0 0.0 0.0412
ENSG00000162415 ZSWIM5 158179 eQTL 7.52e-03 -0.138 0.0517 0.0 0.0 0.0412
ENSG00000197429 IPP -286262 eQTL 9.59e-03 -0.13 0.0501 0.0 0.0 0.0412
ENSG00000222009 BTBD19 655906 eQTL 2.27e-03 -0.111 0.0362 0.0 0.0 0.0412
ENSG00000232022 FAAHP1 -967741 eQTL 9.76e-03 -0.191 0.0737 0.00118 0.0 0.0412
ENSG00000234329 AL604028.2 -187438 eQTL 1.14e-02 -0.155 0.0612 0.0 0.0 0.0412
ENSG00000281912 LINC01144 160478 eQTL 6.25e-03 0.227 0.0829 0.0 0.0 0.0412


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000070759 \N -26775 1.63e-05 1.99e-05 3.18e-06 1.04e-05 3.06e-06 7.51e-06 2.26e-05 3.42e-06 1.72e-05 8.86e-06 2.29e-05 8.32e-06 3.06e-05 7.61e-06 5.08e-06 1.07e-05 8.27e-06 1.52e-05 4.21e-06 4.28e-06 8.49e-06 1.7e-05 1.74e-05 5.19e-06 2.77e-05 5.36e-06 8.03e-06 7.85e-06 1.77e-05 1.52e-05 1.24e-05 1.19e-06 1.53e-06 4.87e-06 7.03e-06 3.89e-06 1.86e-06 2.61e-06 2.95e-06 2.11e-06 1.14e-06 2.49e-05 2.63e-06 2.09e-07 1.88e-06 2.84e-06 2.74e-06 1.3e-06 1.03e-06
ENSG00000086015 MAST2 -322599 1.28e-06 1.01e-06 2.79e-07 9.29e-07 2.43e-07 4.79e-07 1.49e-06 3.28e-07 1.28e-06 4.24e-07 1.52e-06 6.36e-07 2.04e-06 2.76e-07 4.91e-07 8.25e-07 8.28e-07 5.88e-07 5.83e-07 6.91e-07 4.39e-07 1.28e-06 8.93e-07 6.42e-07 2.11e-06 3.47e-07 8.29e-07 7.25e-07 1.25e-06 1.22e-06 6.29e-07 3.86e-08 2.31e-07 5.42e-07 4.36e-07 3.91e-07 4.49e-07 1.4e-07 1.96e-07 7.62e-08 2.71e-07 1.54e-06 6.13e-08 1.25e-08 1.74e-07 1.26e-07 2.01e-07 8.82e-08 8e-08
ENSG00000117425 PTCH2 621135 5.85e-07 2.67e-07 6.86e-08 2.44e-07 1.07e-07 1.28e-07 3.42e-07 5.84e-08 2.04e-07 1.21e-07 2.47e-07 1.86e-07 4.05e-07 8.26e-08 7.79e-08 1.14e-07 5.57e-08 2.43e-07 7.76e-08 8.52e-08 1.33e-07 2.07e-07 2.04e-07 4.91e-08 3.27e-07 1.56e-07 1.37e-07 1.46e-07 1.47e-07 1.69e-07 1.59e-07 4.93e-08 4.74e-08 1.03e-07 7.44e-08 3.36e-08 5.96e-08 6.98e-08 5.59e-08 6.79e-08 4.79e-08 2.6e-07 3.2e-08 1.43e-08 4.91e-08 1.05e-08 7.26e-08 2.1e-09 4.83e-08
ENSG00000117448 \N -86155 7.08e-06 9.1e-06 9.68e-07 4.02e-06 1.74e-06 2.58e-06 9.17e-06 1.3e-06 5.22e-06 4.11e-06 9.01e-06 3.69e-06 1.11e-05 3.41e-06 1.37e-06 5.5e-06 3.12e-06 3.85e-06 1.65e-06 2.02e-06 3.32e-06 7.51e-06 5.54e-06 1.95e-06 1.03e-05 2.21e-06 3.96e-06 2.3e-06 6.66e-06 6.77e-06 4.17e-06 4.74e-07 7.75e-07 2.54e-06 2.36e-06 1.56e-06 1.04e-06 5.42e-07 9.04e-07 7.28e-07 6.17e-07 9.56e-06 8.97e-07 1.83e-07 7.73e-07 1.01e-06 1.04e-06 7.43e-07 5.81e-07
ENSG00000126088 UROD 453438 1.25e-06 7.46e-07 1.07e-07 4.34e-07 9.45e-08 2.67e-07 6.09e-07 1.38e-07 5.3e-07 2.82e-07 9e-07 4.43e-07 9.97e-07 1.58e-07 2.77e-07 2.84e-07 2.98e-07 4.07e-07 2.51e-07 1.76e-07 2.05e-07 4.79e-07 4.2e-07 2.24e-07 1.06e-06 2.4e-07 3.48e-07 2.69e-07 4.33e-07 6.03e-07 3.68e-07 7.03e-08 4.55e-08 1.52e-07 3.35e-07 7.68e-08 1.02e-07 8.15e-08 5.93e-08 3.09e-08 9.77e-08 7.36e-07 4.71e-08 1.78e-08 1.41e-07 1.48e-08 1.11e-07 7.14e-09 5.05e-08
ENSG00000132773 TOE1 124336 4.82e-06 5.15e-06 8.56e-07 3.17e-06 1.32e-06 1.72e-06 5.01e-06 9.78e-07 5.14e-06 2.5e-06 5.73e-06 3.49e-06 7.46e-06 2.04e-06 1.45e-06 3.83e-06 2e-06 3.52e-06 1.44e-06 1.04e-06 2.88e-06 4.95e-06 4.66e-06 1.44e-06 6.86e-06 1.65e-06 2.26e-06 1.78e-06 4.48e-06 4.23e-06 2.85e-06 5.93e-07 7.92e-07 1.6e-06 2.19e-06 9.6e-07 9.42e-07 5.11e-07 1.05e-06 3.8e-07 2.37e-07 6.63e-06 3.65e-07 1.95e-07 4.86e-07 9.32e-07 8.55e-07 2.72e-07 3.25e-07
ENSG00000132780 NASP -119458 5.17e-06 5.26e-06 8.13e-07 3.05e-06 1.6e-06 1.66e-06 5.37e-06 9.79e-07 5.26e-06 2.69e-06 6.15e-06 3.32e-06 7.56e-06 1.92e-06 1.31e-06 3.72e-06 1.92e-06 3.69e-06 1.41e-06 1.16e-06 3.12e-06 4.89e-06 4.56e-06 1.35e-06 7.65e-06 1.81e-06 2.32e-06 1.79e-06 4.58e-06 4.31e-06 2.89e-06 5.42e-07 6.92e-07 1.47e-06 2.23e-06 8.84e-07 9.52e-07 4.26e-07 1.04e-06 3.22e-07 2.79e-07 7.12e-06 4e-07 1.86e-07 5.96e-07 1.14e-06 9.64e-07 4.1e-07 3.26e-07
ENSG00000159588 CCDC17 -159669 4.19e-06 4.48e-06 5.97e-07 1.79e-06 8.02e-07 9.09e-07 2.52e-06 9.02e-07 2.69e-06 1.67e-06 3.95e-06 2.24e-06 5.88e-06 1.34e-06 1e-06 2.34e-06 1.62e-06 2.03e-06 1.61e-06 1.2e-06 1.67e-06 3.68e-06 3.21e-06 1.8e-06 4.77e-06 1.28e-06 1.84e-06 1.72e-06 3.79e-06 2.81e-06 1.93e-06 3.27e-07 5.96e-07 1.42e-06 1.74e-06 9.4e-07 8.89e-07 4.21e-07 1.21e-06 4.16e-07 1.67e-07 4.75e-06 4.63e-07 2.07e-07 3.46e-07 3.53e-07 8.96e-07 1.95e-07 1.56e-07
ENSG00000159592 GPBP1L1 -223725 2.41e-06 2.68e-06 2.74e-07 1.49e-06 4.7e-07 7.89e-07 1.29e-06 3.93e-07 1.76e-06 7.46e-07 1.97e-06 1.46e-06 3.25e-06 9.45e-07 4.52e-07 1.2e-06 1.06e-06 1.34e-06 5.56e-07 7.22e-07 6.35e-07 2.06e-06 1.75e-06 9.3e-07 2.57e-06 9.28e-07 1.2e-06 1.04e-06 1.72e-06 1.56e-06 1.07e-06 2.62e-07 3.35e-07 7.05e-07 8.75e-07 6.14e-07 7.12e-07 3.66e-07 5.37e-07 2.03e-07 3.03e-07 2.94e-06 4.13e-07 9.64e-08 3.75e-07 3.19e-07 3.34e-07 1.4e-07 2.46e-07
ENSG00000162415 ZSWIM5 158179 4.3e-06 4.55e-06 5.8e-07 1.8e-06 7.73e-07 9.87e-07 2.62e-06 9.05e-07 2.79e-06 1.7e-06 4e-06 2.51e-06 6.07e-06 1.39e-06 9.86e-07 2.37e-06 1.66e-06 2.08e-06 1.56e-06 1.26e-06 1.69e-06 3.7e-06 3.37e-06 1.84e-06 4.72e-06 1.23e-06 1.84e-06 1.56e-06 3.79e-06 2.95e-06 2.05e-06 3.45e-07 5.79e-07 1.51e-06 1.91e-06 9.62e-07 9.23e-07 4.22e-07 1.2e-06 4.35e-07 1.67e-07 4.93e-06 4.81e-07 1.99e-07 3.47e-07 3.54e-07 8.67e-07 1.82e-07 1.57e-07
ENSG00000281912 LINC01144 160478 4.19e-06 4.35e-06 5.96e-07 1.86e-06 8e-07 9.27e-07 2.5e-06 8.99e-07 2.73e-06 1.63e-06 3.74e-06 2.28e-06 5.72e-06 1.34e-06 9.63e-07 2.3e-06 1.64e-06 2.03e-06 1.58e-06 1.2e-06 1.64e-06 3.58e-06 3.24e-06 1.8e-06 4.66e-06 1.28e-06 1.8e-06 1.68e-06 3.6e-06 2.79e-06 1.94e-06 3.28e-07 5.76e-07 1.34e-06 1.72e-06 9.75e-07 8.88e-07 4.21e-07 1.18e-06 4.34e-07 1.52e-07 4.71e-06 4.62e-07 2.07e-07 3.45e-07 3.52e-07 8.94e-07 2.22e-07 1.41e-07