Genes within 1Mb (chr1:45425866:C:T):

View on , UCSC , GTEx , gnomAD


Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000070759 TESK2 -65297 sc-eQTL 7.92e-01 0.0601 0.228 0.051 pDC L2
ENSG00000070785 EIF2B3 439144 sc-eQTL 5.85e-01 0.128 0.234 0.051 pDC L2
ENSG00000085998 POMGNT1 -794439 sc-eQTL 8.14e-01 0.0441 0.187 0.051 pDC L2
ENSG00000086015 MAST2 -361121 sc-eQTL 9.90e-01 0.00227 0.185 0.051 pDC L2
ENSG00000117425 PTCH2 582613 sc-eQTL 2.74e-01 -0.2 0.183 0.051 pDC L2
ENSG00000117448 AKR1A1 -124677 sc-eQTL 5.41e-01 -0.122 0.199 0.051 pDC L2
ENSG00000117450 PRDX1 -97181 sc-eQTL 4.71e-01 -0.129 0.178 0.051 pDC L2
ENSG00000117480 FAAH -968451 sc-eQTL 3.42e-01 0.172 0.181 0.051 pDC L2
ENSG00000117481 NSUN4 -914311 sc-eQTL 8.71e-01 -0.0355 0.218 0.051 pDC L2
ENSG00000126088 UROD 414916 sc-eQTL 8.91e-02 0.375 0.219 0.051 pDC L2
ENSG00000126106 TMEM53 751385 sc-eQTL 4.72e-01 0.139 0.193 0.051 pDC L2
ENSG00000126107 HECTD3 414542 sc-eQTL 2.08e-01 -0.29 0.23 0.051 pDC L2
ENSG00000132128 LRRC41 -877742 sc-eQTL 5.82e-03 -0.631 0.226 0.051 pDC L2
ENSG00000132773 TOE1 85814 sc-eQTL 3.39e-01 -0.223 0.233 0.051 pDC L2
ENSG00000132780 NASP -157980 sc-eQTL 9.21e-01 -0.0187 0.188 0.051 pDC L2
ENSG00000132781 MUTYH 84973 sc-eQTL 9.78e-01 -0.00571 0.204 0.051 pDC L2
ENSG00000142937 RPS8 650615 sc-eQTL 8.28e-02 -0.228 0.131 0.051 pDC L2
ENSG00000159592 GPBP1L1 -262247 sc-eQTL 9.85e-01 -0.00434 0.224 0.051 pDC L2
ENSG00000159596 TMEM69 -262315 sc-eQTL 1.48e-01 -0.305 0.21 0.051 pDC L2
ENSG00000173660 UQCRH -877832 sc-eQTL 7.06e-01 0.0676 0.179 0.051 pDC L2
ENSG00000173846 PLK3 625489 sc-eQTL 8.05e-02 0.31 0.176 0.051 pDC L2
ENSG00000197429 IPP -324787 sc-eQTL 1.59e-01 -0.297 0.21 0.051 pDC L2
ENSG00000198520 ARMH1 751174 sc-eQTL 1.91e-02 -0.479 0.202 0.051 pDC L2
ENSG00000222009 BTBD19 617384 sc-eQTL 6.72e-01 -0.0956 0.225 0.051 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000086015 MAST2 -361121 eQTL 0.00652 -0.153 0.0561 0.0 0.0 0.0309
ENSG00000117450 PRDX1 -97181 eQTL 0.00594 -0.0907 0.0329 0.00145 0.00126 0.0309
ENSG00000126088 UROD 414916 pQTL 0.0375 -0.0861 0.0414 0.0 0.0 0.0314


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000117450 PRDX1 -97181 6.92e-06 7.1e-06 7.57e-07 3.42e-06 1.53e-06 1.56e-06 6.11e-06 9.98e-07 5.09e-06 2.4e-06 6.14e-06 3.28e-06 7.56e-06 1.78e-06 1.27e-06 3.13e-06 1.92e-06 3.79e-06 1.5e-06 1.02e-06 2.85e-06 5e-06 4.55e-06 1.43e-06 7.72e-06 1.38e-06 2.55e-06 1.89e-06 4.45e-06 4.23e-06 2.83e-06 5.93e-07 7.52e-07 1.88e-06 2.05e-06 9.19e-07 9.07e-07 4.75e-07 1.3e-06 4.27e-07 2.4e-07 6.66e-06 4.2e-07 1.93e-07 4.18e-07 7.78e-07 8.4e-07 2.62e-07 1.58e-07
ENSG00000142959 \N 637696 3.1e-07 1.53e-07 4.69e-08 2.27e-07 9.87e-08 8.89e-08 1.81e-07 5.43e-08 1.45e-07 5.67e-08 1.67e-07 1.05e-07 1.79e-07 7.37e-08 5.91e-08 7.49e-08 4.01e-08 1.44e-07 7.12e-08 4.89e-08 1.22e-07 1.26e-07 1.5e-07 2.83e-08 1.68e-07 1.25e-07 1.1e-07 1.01e-07 1.23e-07 1.05e-07 1.08e-07 3.08e-08 3.73e-08 8.7e-08 3.07e-08 3.62e-08 5.7e-08 8.61e-08 6.43e-08 4.41e-08 5.39e-08 1.52e-07 5.21e-08 7.21e-09 3.83e-08 1.55e-08 1.21e-07 3.8e-09 4.88e-08