Genes within 1Mb (chr1:45425063:A:T):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000070759 TESK2 -66100 eQTL 6.29e-06 0.364 0.0801 0.00104 0.0 0.00834
ENSG00000117448 AKR1A1 -125480 eQTL 3.84e-04 -0.217 0.0608 0.0 0.0 0.00834
ENSG00000117450 PRDX1 -97984 pQTL 2.03e-03 0.276 0.0893 0.00208 0.00164 0.00867
ENSG00000117480 FAAH -969254 eQTL 1.75e-08 0.643 0.113 0.0 0.0 0.00834
ENSG00000117481 NSUN4 -915114 eQTL 4.08e-18 1.12 0.127 0.0 0.0 0.00834
ENSG00000126088 UROD 414113 pQTL 1.60e-02 -0.186 0.0771 0.0 0.0 0.00867
ENSG00000126088 UROD 414113 eQTL 2.00e-03 -0.348 0.112 0.0 0.0 0.00834
ENSG00000142959 BEST4 636893 eQTL 2.49e-02 0.339 0.151 0.0 0.0 0.00834
ENSG00000159588 CCDC17 -198994 eQTL 4.31e-08 -0.419 0.0758 0.0 0.0 0.00834
ENSG00000159596 TMEM69 -263118 eQTL 8.30e-03 -0.314 0.119 0.0 0.0 0.00834
ENSG00000198520 ARMH1 750350 eQTL 6.25e-03 0.263 0.0958 0.00175 0.0 0.00834
ENSG00000225447 RPS15AP10 -221134 eQTL 3.89e-02 -0.374 0.181 0.0 0.0 0.00834


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000070759 TESK2 -66100 4.82e-06 8.04e-06 6.57e-07 3.85e-06 1.71e-06 1.56e-06 7.57e-06 1.18e-06 4.54e-06 2.86e-06 8.05e-06 2.98e-06 1.04e-05 3.18e-06 1.02e-06 3.99e-06 2.51e-06 3.84e-06 1.58e-06 1.44e-06 2.87e-06 5.5e-06 4.8e-06 1.73e-06 9.55e-06 2.07e-06 2.69e-06 1.71e-06 5.8e-06 7.66e-06 3.38e-06 5.58e-07 5.37e-07 2.24e-06 2.35e-06 1.54e-06 1.07e-06 5.14e-07 9.13e-07 7.73e-07 4.63e-07 8.26e-06 5.26e-07 1.66e-07 6.11e-07 1.1e-06 1.03e-06 6.58e-07 4.38e-07
ENSG00000117448 AKR1A1 -125480 3.21e-06 4.75e-06 4.51e-07 2.1e-06 6.67e-07 7.26e-07 2.54e-06 9.05e-07 2.47e-06 1.4e-06 3.8e-06 2.2e-06 5.9e-06 1.81e-06 8.98e-07 2.1e-06 1.59e-06 2.09e-06 1.56e-06 1.39e-06 1.36e-06 3.33e-06 3.3e-06 1.24e-06 4.77e-06 1.03e-06 1.63e-06 1.74e-06 3.22e-06 3.39e-06 2.01e-06 3.04e-07 5.69e-07 1.61e-06 2.01e-06 9.36e-07 8.91e-07 3.61e-07 1.18e-06 3.64e-07 3.05e-07 4.85e-06 5.92e-07 1.89e-07 3.61e-07 3.61e-07 7.91e-07 2.62e-07 1.53e-07
ENSG00000117480 FAAH -969254 2.64e-07 1.3e-07 3.71e-08 1.81e-07 9.01e-08 9.61e-08 1.42e-07 5.19e-08 1.4e-07 4.57e-08 1.6e-07 8.14e-08 1.41e-07 6.56e-08 5.84e-08 7.17e-08 3.9e-08 1.18e-07 5.39e-08 4.42e-08 1.04e-07 1.26e-07 1.34e-07 3.68e-08 1.37e-07 1.14e-07 1.08e-07 9.57e-08 1.05e-07 1.1e-07 9.91e-08 3.64e-08 3.16e-08 8.68e-08 8.38e-08 3.93e-08 5.08e-08 9.25e-08 7.23e-08 3.71e-08 3.95e-08 1.35e-07 4.19e-08 1.32e-08 5.75e-08 1.83e-08 1.22e-07 3.8e-09 4.94e-08
ENSG00000117481 NSUN4 -915114 2.67e-07 1.3e-07 3.69e-08 1.82e-07 9.21e-08 1e-07 1.44e-07 5.2e-08 1.41e-07 4.74e-08 1.62e-07 8.59e-08 1.41e-07 6.76e-08 6e-08 7.37e-08 3.98e-08 1.21e-07 5.82e-08 4e-08 1.08e-07 1.23e-07 1.39e-07 3.49e-08 1.4e-07 1.16e-07 1.06e-07 9.65e-08 1.05e-07 1.07e-07 9.64e-08 3.66e-08 3.35e-08 8.44e-08 7.51e-08 3.95e-08 4.99e-08 9.3e-08 7.2e-08 3.86e-08 3.57e-08 1.35e-07 4.33e-08 1.23e-08 5.43e-08 1.99e-08 1.19e-07 3.78e-09 4.88e-08
ENSG00000126088 UROD 414113 7.76e-07 7.46e-07 1.05e-07 4.39e-07 9.26e-08 2.09e-07 5.28e-07 1.37e-07 3.94e-07 2.28e-07 8.15e-07 3.62e-07 7.93e-07 1.54e-07 1.68e-07 2.1e-07 2.77e-07 3.95e-07 2.25e-07 1.43e-07 1.92e-07 3.65e-07 3.69e-07 1.61e-07 8.99e-07 2.42e-07 2.71e-07 2.59e-07 3.43e-07 6.27e-07 3.13e-07 6.2e-08 4.28e-08 1.54e-07 3.38e-07 1.16e-07 8.43e-08 9.46e-08 3.82e-08 2.28e-08 5.38e-08 6.11e-07 2.75e-08 1.1e-08 1.08e-07 1.31e-08 8.24e-08 2.35e-08 5.13e-08
ENSG00000159588 CCDC17 -198994 1.41e-06 2.51e-06 2.91e-07 1.54e-06 3.95e-07 6.4e-07 1.27e-06 3.95e-07 1.7e-06 7.11e-07 1.81e-06 1.29e-06 2.67e-06 8.94e-07 4.61e-07 9.68e-07 1.12e-06 1.18e-06 5.38e-07 4.81e-07 7.49e-07 1.98e-06 1.44e-06 6.29e-07 2.52e-06 7.53e-07 1e-06 9.82e-07 1.69e-06 1.64e-06 7.56e-07 2.98e-07 2.96e-07 6.11e-07 9.62e-07 6.22e-07 7.02e-07 3.48e-07 4.92e-07 2.33e-07 2.88e-07 2.63e-06 2.9e-07 1.31e-07 3.22e-07 2.88e-07 2.46e-07 1.71e-07 2.04e-07
ENSG00000159596 TMEM69 -263118 1.25e-06 1.25e-06 3.25e-07 1.18e-06 2.76e-07 4.78e-07 1.41e-06 3.52e-07 1.32e-06 4.28e-07 1.87e-06 6.43e-07 2.13e-06 2.83e-07 4.61e-07 8.28e-07 8e-07 6.56e-07 7.76e-07 6.8e-07 4.44e-07 1.27e-06 8.89e-07 6.23e-07 2.19e-06 3.79e-07 8.68e-07 7.03e-07 1.25e-06 1.27e-06 6.97e-07 9.48e-08 2.24e-07 6.95e-07 5.3e-07 4.53e-07 5.1e-07 1.69e-07 2.56e-07 3.12e-07 2.44e-07 1.63e-06 6.65e-08 5.68e-08 1.92e-07 1.29e-07 2.09e-07 5.35e-08 1.04e-07