Genes within 1Mb (chr1:45361069:C:T):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000070759 TESK2 -130094 eQTL 1.59e-03 0.108 0.0342 0.0 0.0 0.0491
ENSG00000086015 MAST2 -425918 eQTL 4.38e-12 0.31 0.0442 0.0 0.0 0.0491
ENSG00000117448 AKR1A1 -189474 eQTL 8.34e-03 -0.0684 0.0259 0.0 0.0 0.0491
ENSG00000117481 NSUN4 -979108 eQTL 2.32e-05 0.236 0.0555 0.0 0.0 0.0491
ENSG00000126088 UROD 350119 pQTL 8.03e-03 0.0884 0.0333 0.0 0.0 0.0491
ENSG00000132773 TOE1 21017 eQTL 7.50e-04 -0.103 0.0303 0.0049 0.00388 0.0491
ENSG00000132780 NASP -222777 eQTL 6.25e-08 -0.2 0.0366 0.0 0.0 0.0491
ENSG00000132781 MUTYH 20599 eQTL 1.45e-02 0.074 0.0302 0.0 0.0 0.0491
ENSG00000159588 CCDC17 -262988 eQTL 1.11e-20 -0.298 0.0312 0.0 0.0 0.0491
ENSG00000159592 GPBP1L1 -327044 eQTL 1.69e-02 0.0588 0.0246 0.0 0.0 0.0491
ENSG00000162415 ZSWIM5 54860 eQTL 4.56e-02 -0.0965 0.0482 0.0 0.0 0.0491
ENSG00000197429 IPP -389581 eQTL 1.84e-03 -0.145 0.0465 0.0 0.0 0.0491
ENSG00000222009 BTBD19 552587 eQTL 3.63e-02 -0.0709 0.0338 0.0 0.0 0.0491
ENSG00000281912 LINC01144 57159 eQTL 1.53e-03 0.245 0.0771 0.00132 0.00104 0.0491


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000070759 TESK2 -130094 4.19e-06 4.16e-06 4.65e-07 2.39e-06 6.22e-07 9.33e-07 4.56e-06 9.1e-07 2.25e-06 1.12e-06 3.2e-06 1.39e-06 5.46e-06 1.36e-06 1.18e-06 2.11e-06 1.56e-06 2.39e-06 1.38e-06 1.3e-06 1.4e-06 3.15e-06 3.54e-06 1.24e-06 4.77e-06 1.02e-06 1.57e-06 1.79e-06 4.32e-06 2.57e-06 1.99e-06 2.46e-07 5.29e-07 1.35e-06 1.69e-06 9.35e-07 7.76e-07 4.02e-07 1.12e-06 1.86e-07 3.53e-07 3.88e-06 3.96e-07 1.33e-07 3.75e-07 3.37e-07 6.26e-07 2.52e-07 2.13e-07
ENSG00000086015 MAST2 -425918 7.76e-07 3.12e-07 7.45e-08 4.04e-07 1.05e-07 1.5e-07 5.76e-07 6.75e-08 2.26e-07 1.28e-07 2.98e-07 1.86e-07 4.54e-07 1.01e-07 1.45e-07 1.49e-07 6.63e-08 3.02e-07 9.97e-08 8.52e-08 1.35e-07 2.24e-07 2.77e-07 9.63e-08 4.88e-07 1.71e-07 2.23e-07 1.44e-07 2.4e-07 2.26e-07 1.71e-07 4.93e-08 4.74e-08 1.24e-07 1.76e-07 6.23e-08 6.39e-08 7.61e-08 6.29e-08 5.56e-08 5.04e-08 2.72e-07 5.38e-08 1.57e-08 5.84e-08 9.49e-09 7.13e-08 2.2e-09 4.55e-08
ENSG00000117425 \N 517816 3.92e-07 1.59e-07 5.91e-08 2.66e-07 9.94e-08 8.75e-08 3.57e-07 5.75e-08 1.59e-07 8.53e-08 1.66e-07 1.2e-07 2.38e-07 8.44e-08 6.6e-08 9.6e-08 4.45e-08 2.04e-07 7.39e-08 5.33e-08 1.18e-07 1.47e-07 1.73e-07 4.17e-08 2.48e-07 1.23e-07 1.33e-07 1.06e-07 1.34e-07 1.24e-07 1.21e-07 3.59e-08 3.13e-08 9.52e-08 5.65e-08 3.3e-08 4.43e-08 8.72e-08 6.71e-08 4.47e-08 5.05e-08 1.6e-07 1.65e-08 1.43e-08 3.55e-08 6.83e-09 1.11e-07 1.9e-09 4.81e-08
ENSG00000117448 AKR1A1 -189474 2.11e-06 2.13e-06 2.88e-07 1.74e-06 3.95e-07 7.12e-07 1.88e-06 4.23e-07 1.75e-06 6.44e-07 2e-06 9.29e-07 2.68e-06 8.5e-07 4.59e-07 1.02e-06 1.12e-06 1.34e-06 5.84e-07 5.21e-07 7.67e-07 1.97e-06 1.87e-06 6.43e-07 2.58e-06 7.4e-07 1.04e-06 9.6e-07 1.73e-06 1.31e-06 8.27e-07 1.87e-07 2.5e-07 5.72e-07 6.99e-07 5.58e-07 7.46e-07 1.66e-07 5.01e-07 2.49e-07 3.17e-07 2.13e-06 4.23e-07 6.41e-08 2.83e-07 2.31e-07 2.17e-07 8.42e-08 1.57e-07
ENSG00000117481 NSUN4 -979108 2.64e-07 1.01e-07 3.69e-08 1.82e-07 9.65e-08 9.3e-08 1.42e-07 5.21e-08 1.42e-07 4.24e-08 1.62e-07 8.03e-08 1.26e-07 6.21e-08 5.4e-08 7.5e-08 4.94e-08 1.14e-07 5.19e-08 3.89e-08 1.05e-07 1.3e-07 1.3e-07 4.54e-08 1.31e-07 1.13e-07 1.12e-07 8.71e-08 1.02e-07 1.09e-07 9.58e-08 3.89e-08 2.74e-08 8.68e-08 8.93e-08 4.02e-08 4.67e-08 9.25e-08 8.3e-08 3.34e-08 4.19e-08 1.36e-07 5.27e-08 2.17e-08 7.91e-08 1.68e-08 1.27e-07 4.33e-09 4.77e-08
ENSG00000132773 TOE1 21017 1.5e-05 1.73e-05 3.01e-06 1.02e-05 2.5e-06 6.44e-06 3.46e-05 2.46e-06 1.39e-05 6.09e-06 1.78e-05 6.72e-06 2.86e-05 5.5e-06 5.08e-06 9.01e-06 8.8e-06 1.47e-05 4.02e-06 4.08e-06 7.34e-06 1.32e-05 2.69e-05 4.85e-06 2.73e-05 5.18e-06 7.57e-06 5.39e-06 2.69e-05 1.57e-05 9.4e-06 9.55e-07 1.48e-06 4e-06 6.33e-06 3.11e-06 1.82e-06 2.38e-06 2.84e-06 1.2e-06 9.34e-07 1.83e-05 2.15e-06 1.67e-07 9.34e-07 2.2e-06 1.98e-06 8.34e-07 6.37e-07
ENSG00000132780 NASP -222777 1.38e-06 1.25e-06 3.26e-07 1.35e-06 3.6e-07 6.09e-07 1.31e-06 3.69e-07 1.4e-06 4.48e-07 1.84e-06 6.6e-07 2.43e-06 3.26e-07 4.48e-07 9.07e-07 9.08e-07 9.52e-07 8.18e-07 7.04e-07 6.13e-07 1.45e-06 1.17e-06 5.66e-07 2.41e-06 4.36e-07 9.49e-07 7.26e-07 1.62e-06 1.26e-06 6.97e-07 4.91e-08 2.36e-07 6.89e-07 5.3e-07 4.42e-07 4.77e-07 1.39e-07 2.21e-07 3.03e-08 1.91e-07 1.64e-06 3.73e-07 2.68e-08 2.01e-07 1.25e-07 1.97e-07 8.88e-08 8.61e-08
ENSG00000132781 MUTYH 20599 1.51e-05 1.76e-05 2.95e-06 1.03e-05 2.44e-06 6.55e-06 3.49e-05 2.46e-06 1.41e-05 6.24e-06 1.79e-05 6.86e-06 2.87e-05 5.53e-06 5.09e-06 9.06e-06 8.87e-06 1.49e-05 4.11e-06 4.13e-06 7.43e-06 1.35e-05 2.69e-05 4.9e-06 2.73e-05 5.29e-06 7.57e-06 5.28e-06 2.71e-05 1.58e-05 9.55e-06 9.73e-07 1.43e-06 4.02e-06 6.34e-06 3.17e-06 1.84e-06 2.4e-06 2.91e-06 1.2e-06 9.45e-07 1.85e-05 2.21e-06 1.7e-07 9.29e-07 2.27e-06 2.04e-06 8.04e-07 6.34e-07
ENSG00000159588 CCDC17 -262988 1.21e-06 9.48e-07 2.95e-07 1.18e-06 2.19e-07 4.69e-07 1.5e-06 3.02e-07 1.11e-06 3.28e-07 1.35e-06 5.73e-07 1.75e-06 2.55e-07 5.72e-07 7.13e-07 7.66e-07 5.36e-07 4.95e-07 4.12e-07 3.07e-07 9.14e-07 8.89e-07 5.98e-07 2.05e-06 2.47e-07 7.55e-07 4.7e-07 1.24e-06 1.07e-06 5.23e-07 4.06e-08 9.79e-08 4.83e-07 4e-07 4.41e-07 3.1e-07 1.07e-07 7.56e-08 1.57e-08 1.17e-07 1.43e-06 1.66e-07 1.24e-08 1.84e-07 7.7e-08 1.46e-07 3.17e-08 5.32e-08
ENSG00000159592 GPBP1L1 -327044 1.2e-06 7.58e-07 1.27e-07 4.88e-07 1.12e-07 3.28e-07 1.08e-06 1.45e-07 5.06e-07 2.72e-07 9.39e-07 4.21e-07 1.05e-06 2.06e-07 3.9e-07 3.4e-07 3.52e-07 4.44e-07 2.79e-07 1.65e-07 2.3e-07 4.38e-07 5.49e-07 2.71e-07 1.42e-06 2.49e-07 4.83e-07 2.65e-07 6.47e-07 7.36e-07 3.56e-07 7.79e-08 4.74e-08 1.79e-07 3.7e-07 1.85e-07 8.6e-08 6.67e-08 4.23e-08 6.07e-08 4.63e-08 7.2e-07 5.49e-08 1.54e-08 1.34e-07 2.64e-08 8.13e-08 3.3e-09 4.97e-08
ENSG00000281912 LINC01144 57159 8.53e-06 9.37e-06 1.3e-06 5.08e-06 1.84e-06 4.02e-06 1.34e-05 1.49e-06 5.94e-06 3.5e-06 9.14e-06 3.55e-06 1.24e-05 3.8e-06 2.33e-06 5.49e-06 4.01e-06 6.85e-06 2.2e-06 2.41e-06 4.18e-06 7.66e-06 1.07e-05 2.32e-06 1.29e-05 2.8e-06 3.93e-06 2.3e-06 1.26e-05 7.65e-06 4.1e-06 4.73e-07 7.8e-07 2.75e-06 2.92e-06 1.73e-06 1.04e-06 5.55e-07 1.36e-06 5.61e-07 5.68e-07 9.84e-06 1.29e-06 1.6e-07 7.7e-07 9.91e-07 1.05e-06 6.6e-07 5.92e-07