Genes within 1Mb (chr1:45315571:T:C):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000085999 RAD54L -932117 eQTL 4.94e-03 -0.0718 0.0255 0.0 0.0 0.17
ENSG00000086015 MAST2 -471416 eQTL 3.20e-04 0.0917 0.0254 0.0 0.0 0.17
ENSG00000117450 PRDX1 -207476 eQTL 6.60e-03 0.0406 0.0149 0.0 0.0 0.17
ENSG00000126088 UROD 304621 pQTL 9.68e-09 0.11 0.0191 0.0 0.0 0.165
ENSG00000126088 UROD 304621 eQTL 9.75e-06 0.119 0.0267 0.0 0.0 0.17
ENSG00000132128 LRRC41 -988037 eQTL 3.54e-02 0.0468 0.0222 0.00102 0.0 0.17
ENSG00000132781 MUTYH -24899 eQTL 9.46e-03 -0.0443 0.017 0.0 0.0 0.17
ENSG00000159588 CCDC17 -308486 eQTL 2.22e-06 -0.0867 0.0182 0.0 0.0 0.17
ENSG00000159596 TMEM69 -372610 eQTL 2.53e-02 -0.0637 0.0284 0.0 0.0 0.17
ENSG00000162415 ZSWIM5 9362 eQTL 1.62e-02 -0.0654 0.0272 0.0 0.0 0.17
ENSG00000222009 BTBD19 507089 eQTL 1.17e-10 -0.122 0.0187 0.0 0.0 0.17
ENSG00000225721 AL592166.1 539761 eQTL 2.06e-02 0.107 0.0463 0.0 0.0 0.17
ENSG00000280670 CCDC163 -184508 eQTL 1.07e-23 0.471 0.0457 0.0 0.0 0.17


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000086015 MAST2 -471416 5.74e-07 4e-07 8.99e-08 3.61e-07 1.1e-07 1.85e-07 4.42e-07 1.03e-07 3.17e-07 2.14e-07 4.3e-07 3.08e-07 6.08e-07 1.1e-07 1.5e-07 1.76e-07 1.85e-07 3.12e-07 1.7e-07 1.31e-07 2.09e-07 3.1e-07 3.03e-07 1.19e-07 5.15e-07 2.32e-07 2.23e-07 2.54e-07 2.57e-07 3.71e-07 2.19e-07 5.62e-08 5.55e-08 1.39e-07 3.04e-07 7.68e-08 8.28e-08 1.09e-07 6.33e-08 3.05e-08 8.48e-08 4.02e-07 2.84e-08 1.06e-08 1.01e-07 1.42e-08 8.84e-08 2.44e-08 6.36e-08
ENSG00000117450 PRDX1 -207476 1.55e-06 2.2e-06 3.08e-07 1.48e-06 4.25e-07 6.96e-07 1.27e-06 4.28e-07 1.76e-06 7.32e-07 1.82e-06 1.29e-06 2.86e-06 8.66e-07 4.02e-07 1.06e-06 1.13e-06 1.21e-06 5.45e-07 6.49e-07 7.19e-07 1.99e-06 1.63e-06 7.82e-07 2.58e-06 9.36e-07 1.01e-06 1.22e-06 1.73e-06 1.51e-06 7.49e-07 2.7e-07 4.55e-07 6.66e-07 9.21e-07 6.59e-07 7.27e-07 3.94e-07 6.98e-07 1.98e-07 3.59e-07 2.63e-06 4.26e-07 1.66e-07 3.14e-07 3.14e-07 4.08e-07 2.42e-07 2.47e-07
ENSG00000126088 UROD 304621 1.24e-06 9.23e-07 2.93e-07 7.39e-07 2.1e-07 4.77e-07 1.13e-06 3.46e-07 1.15e-06 4.03e-07 1.35e-06 5.97e-07 1.82e-06 2.9e-07 4.31e-07 7e-07 8.43e-07 5.68e-07 5.54e-07 6.44e-07 6.12e-07 1.17e-06 7.52e-07 5.4e-07 1.94e-06 3.17e-07 6.81e-07 7.74e-07 9.81e-07 1.11e-06 5.79e-07 1.57e-07 2.19e-07 5.39e-07 5.32e-07 4.6e-07 5.22e-07 2.31e-07 3.6e-07 1.3e-07 3e-07 1.54e-06 5.77e-08 4.22e-08 1.82e-07 1.24e-07 2.38e-07 3.66e-08 1.34e-07
ENSG00000132773 \N -24481 1.3e-05 1.67e-05 3.01e-06 9.47e-06 2.55e-06 7.14e-06 2.08e-05 3.03e-06 1.6e-05 8.28e-06 2.06e-05 7.68e-06 2.88e-05 6.43e-06 4.98e-06 9.29e-06 8.09e-06 1.23e-05 4.54e-06 4.17e-06 7.79e-06 1.47e-05 1.51e-05 4.73e-06 2.66e-05 5.11e-06 7.74e-06 6.92e-06 1.69e-05 1.55e-05 1.16e-05 1.03e-06 1.46e-06 4.13e-06 7.03e-06 3.73e-06 1.79e-06 2.7e-06 2.81e-06 2.11e-06 1.14e-06 2e-05 2.34e-06 2.62e-07 1.03e-06 2.56e-06 2.62e-06 1.14e-06 9.75e-07
ENSG00000132780 \N -268275 1.32e-06 9.74e-07 3.21e-07 1.17e-06 3.09e-07 6.31e-07 1.63e-06 3.82e-07 1.49e-06 6.29e-07 1.79e-06 7.04e-07 2.27e-06 2.89e-07 5.62e-07 9.17e-07 9.2e-07 6.58e-07 8.35e-07 6.36e-07 8.18e-07 1.6e-06 8.31e-07 6.51e-07 2.29e-06 4.17e-07 9.02e-07 8.91e-07 1.32e-06 1.31e-06 6.78e-07 2.53e-07 2.66e-07 6.85e-07 5.42e-07 4.62e-07 7.25e-07 3.1e-07 4.75e-07 3.1e-07 2.84e-07 1.63e-06 1.23e-07 8.1e-08 1.45e-07 2.13e-07 2.19e-07 9.32e-08 1.85e-07
ENSG00000159588 CCDC17 -308486 1.25e-06 9.44e-07 2.88e-07 6.94e-07 2.05e-07 4.69e-07 1.1e-06 3.31e-07 1.15e-06 3.95e-07 1.35e-06 6.06e-07 1.76e-06 2.83e-07 4.42e-07 6.7e-07 8.28e-07 5.48e-07 5.29e-07 6.25e-07 5.66e-07 1.12e-06 7.96e-07 5.1e-07 1.92e-06 2.89e-07 6.16e-07 7.26e-07 9.65e-07 1.09e-06 5.45e-07 1.55e-07 2.16e-07 5.28e-07 5.36e-07 4.32e-07 5.15e-07 2.15e-07 3.43e-07 1.17e-07 2.98e-07 1.53e-06 6.65e-08 4.19e-08 1.62e-07 1.23e-07 2.34e-07 5.39e-08 1.23e-07
ENSG00000159592 \N -372542 1.01e-06 8.16e-07 1.6e-07 3.1e-07 1.11e-07 3.2e-07 6.54e-07 2.28e-07 7.11e-07 3.05e-07 1.03e-06 5.22e-07 1.16e-06 2.14e-07 3.61e-07 3.57e-07 5.63e-07 4.39e-07 3.26e-07 2.73e-07 2.89e-07 5.49e-07 4.74e-07 2.89e-07 1.25e-06 2.64e-07 4.55e-07 4.59e-07 5.43e-07 8.36e-07 4.02e-07 4.5e-08 1.49e-07 2.17e-07 3.22e-07 2.76e-07 2.94e-07 1.55e-07 1.55e-07 1.82e-08 1.45e-07 8.79e-07 7.23e-08 1.28e-08 1.94e-07 7.16e-08 1.58e-07 8.51e-08 8e-08
ENSG00000173660 \N -988127 2.64e-07 1.19e-07 3.69e-08 1.86e-07 9.21e-08 9.8e-08 1.44e-07 5.37e-08 1.44e-07 4.94e-08 1.62e-07 8.59e-08 1.41e-07 6.56e-08 6.17e-08 7.37e-08 3.98e-08 1.21e-07 5.82e-08 4.1e-08 1.21e-07 1.27e-07 1.34e-07 3.42e-08 1.37e-07 1.14e-07 1.06e-07 9.61e-08 1.05e-07 1.07e-07 9.91e-08 3.06e-08 3.73e-08 8.25e-08 7.36e-08 3.49e-08 5.45e-08 8.72e-08 6.86e-08 3.86e-08 4.69e-08 1.33e-07 5.27e-08 7.72e-09 4.92e-08 1.89e-08 1.22e-07 1.9e-09 4.99e-08
ENSG00000222009 BTBD19 507089 4.37e-07 3.12e-07 7.72e-08 3.57e-07 1.09e-07 1.57e-07 3.7e-07 8.86e-08 2.6e-07 1.78e-07 3.25e-07 2.22e-07 4.88e-07 1.01e-07 1.27e-07 1.46e-07 1.18e-07 2.9e-07 1.36e-07 8.11e-08 1.91e-07 2.51e-07 2.56e-07 7.94e-08 3.98e-07 2.01e-07 1.78e-07 2.01e-07 2.03e-07 2.59e-07 1.88e-07 7.79e-08 4.28e-08 1.15e-07 2.61e-07 6.83e-08 1.1e-07 8.15e-08 4e-08 5.96e-08 4.78e-08 3.06e-07 1.65e-08 1.98e-08 8.59e-08 1.25e-08 9.73e-08 1.28e-08 5.13e-08
ENSG00000280670 CCDC163 -184508 1.87e-06 2.53e-06 2.72e-07 1.8e-06 4.39e-07 8.21e-07 1.52e-06 6.05e-07 1.79e-06 9.12e-07 2.12e-06 1.35e-06 3.53e-06 1.42e-06 6.96e-07 1.18e-06 9.55e-07 1.62e-06 7.13e-07 1.07e-06 1.12e-06 2.61e-06 2e-06 1e-06 3.15e-06 1.21e-06 1.22e-06 1.63e-06 1.85e-06 1.66e-06 1.55e-06 2.69e-07 5.18e-07 1.12e-06 1.27e-06 8.86e-07 8.45e-07 4.39e-07 1.05e-06 3.5e-07 3.05e-07 3.35e-06 4.81e-07 1.99e-07 3.55e-07 3.38e-07 6.27e-07 2.44e-07 2e-07