Genes within 1Mb (chr1:45284820:G:A):

View on , UCSC , GTEx , gnomAD


Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000070759 TESK2 -206343 sc-eQTL 8.67e-03 0.532 0.2 0.051 cDC L2
ENSG00000070785 EIF2B3 298098 sc-eQTL 1.94e-01 0.255 0.196 0.051 cDC L2
ENSG00000085998 POMGNT1 -935485 sc-eQTL 6.93e-01 0.0818 0.207 0.051 cDC L2
ENSG00000086015 MAST2 -502167 sc-eQTL 8.76e-01 0.0287 0.184 0.051 cDC L2
ENSG00000117419 ERI3 929560 sc-eQTL 5.44e-01 -0.13 0.214 0.051 cDC L2
ENSG00000117425 PTCH2 441567 sc-eQTL 1.49e-01 0.254 0.175 0.051 cDC L2
ENSG00000117448 AKR1A1 -265723 sc-eQTL 9.55e-01 -0.0112 0.196 0.051 cDC L2
ENSG00000117450 PRDX1 -238227 sc-eQTL 2.87e-01 0.155 0.145 0.051 cDC L2
ENSG00000126088 UROD 273870 sc-eQTL 9.51e-01 -0.0122 0.2 0.051 cDC L2
ENSG00000126106 TMEM53 610339 sc-eQTL 9.32e-01 -0.0164 0.192 0.051 cDC L2
ENSG00000126107 HECTD3 273496 sc-eQTL 1.52e-01 -0.325 0.226 0.051 cDC L2
ENSG00000132773 TOE1 -55232 sc-eQTL 2.53e-01 0.255 0.222 0.051 cDC L2
ENSG00000132780 NASP -299026 sc-eQTL 4.49e-01 0.153 0.202 0.051 cDC L2
ENSG00000132781 MUTYH -56073 sc-eQTL 8.66e-01 0.0351 0.208 0.051 cDC L2
ENSG00000142937 RPS8 509569 sc-eQTL 6.66e-01 0.0415 0.0959 0.051 cDC L2
ENSG00000159592 GPBP1L1 -403293 sc-eQTL 9.41e-01 0.0155 0.208 0.051 cDC L2
ENSG00000159596 TMEM69 -403361 sc-eQTL 2.33e-02 -0.473 0.207 0.051 cDC L2
ENSG00000173846 PLK3 484443 sc-eQTL 2.29e-01 0.168 0.14 0.051 cDC L2
ENSG00000187147 RNF220 879626 sc-eQTL 7.13e-03 0.494 0.182 0.051 cDC L2
ENSG00000197429 IPP -465833 sc-eQTL 7.36e-02 -0.313 0.174 0.051 cDC L2
ENSG00000198520 ARMH1 610128 sc-eQTL 7.25e-01 0.0765 0.218 0.051 cDC L2
ENSG00000222009 BTBD19 476338 sc-eQTL 5.79e-01 -0.108 0.195 0.051 cDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000086015 MAST2 -502167 eQTL 5.39e-11 0.326 0.0491 0.0 0.0 0.0397
ENSG00000117450 PRDX1 -238227 pQTL 0.0143 -0.108 0.044 0.00133 0.0 0.0387
ENSG00000126088 UROD 273870 pQTL 6.1e-06 0.171 0.0377 0.0 0.0 0.0387
ENSG00000126088 UROD 273870 eQTL 0.0327 0.113 0.0529 0.0 0.0 0.0397
ENSG00000132773 TOE1 -55232 eQTL 0.00375 -0.0977 0.0336 0.00114 0.00109 0.0397
ENSG00000132780 NASP -299026 eQTL 5.69e-07 -0.204 0.0406 0.0 0.0 0.0397
ENSG00000132781 MUTYH -55650 eQTL 0.0385 0.0694 0.0335 0.0 0.0 0.0397
ENSG00000159588 CCDC17 -339237 eQTL 2.13e-11 -0.24 0.0354 0.0 0.0 0.0397
ENSG00000162415 ZSWIM5 -21389 eQTL 0.0162 -0.128 0.0533 0.0 0.0 0.0397
ENSG00000197429 IPP -465830 eQTL 0.00968 -0.134 0.0516 0.0 0.0 0.0397
ENSG00000222009 BTBD19 476338 eQTL 0.000116 -0.144 0.0372 0.0 0.0 0.0397
ENSG00000234329 AL604028.2 -367006 eQTL 0.0307 -0.137 0.0632 0.0 0.0 0.0397
ENSG00000281912 LINC01144 -19090 eQTL 0.0104 0.219 0.0855 0.0 0.0 0.0397


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000086015 MAST2 -502167 5.59e-07 3.11e-07 8.51e-08 2.62e-07 1.07e-07 1.54e-07 3.94e-07 8.37e-08 2.66e-07 1.7e-07 3.66e-07 2.8e-07 4.54e-07 1.01e-07 1.26e-07 1.53e-07 1.38e-07 2.96e-07 1.5e-07 8.41e-08 1.68e-07 2.51e-07 2.63e-07 1.03e-07 4.46e-07 2.13e-07 1.85e-07 2.01e-07 2.31e-07 2.97e-07 1.86e-07 7.79e-08 5.38e-08 1.23e-07 1.67e-07 6.52e-08 9.52e-08 6.67e-08 5.4e-08 7.5e-08 4.27e-08 3.26e-07 1.21e-08 1.86e-08 9.79e-08 1.37e-08 9.73e-08 1.11e-08 5.35e-08
ENSG00000117425 \N 441567 7.87e-07 5.18e-07 9.89e-08 3.48e-07 9.16e-08 1.97e-07 5.2e-07 1.21e-07 3.94e-07 2.34e-07 5.93e-07 3.65e-07 6.98e-07 1.34e-07 2.15e-07 2.18e-07 2.98e-07 3.79e-07 1.97e-07 1.43e-07 2.05e-07 3.65e-07 3.3e-07 1.44e-07 6.87e-07 2.34e-07 2.58e-07 2.59e-07 3.56e-07 5.17e-07 2.55e-07 6.92e-08 5.31e-08 1.37e-07 3.04e-07 1.16e-07 1.05e-07 7.75e-08 4.44e-08 3.12e-08 8.35e-08 5.09e-07 2.99e-08 1.06e-08 1.33e-07 1.31e-08 1.07e-07 2.35e-08 5.76e-08
ENSG00000126088 UROD 273870 1.32e-06 9.53e-07 3.41e-07 6.97e-07 3.51e-07 4.78e-07 1.41e-06 3.54e-07 1.41e-06 4.48e-07 1.63e-06 6.63e-07 2.02e-06 3e-07 5.58e-07 8.22e-07 8.25e-07 6.21e-07 7.76e-07 6.86e-07 6.51e-07 1.36e-06 8.84e-07 6.47e-07 2.1e-06 4.33e-07 8.29e-07 7.19e-07 1.3e-06 1.25e-06 6.16e-07 2.06e-07 1.88e-07 6.19e-07 5.41e-07 4.42e-07 5.02e-07 1.69e-07 3.5e-07 2.51e-07 2.59e-07 1.55e-06 6.13e-08 7.3e-08 1.79e-07 1.25e-07 2.37e-07 3.7e-08 1.34e-07
ENSG00000132773 TOE1 -55232 7.46e-06 9.25e-06 1.31e-06 4.3e-06 2.18e-06 3.71e-06 9.57e-06 1.75e-06 7.7e-06 4.74e-06 1.08e-05 4.97e-06 1.3e-05 3.88e-06 2.11e-06 6.1e-06 3.85e-06 5.81e-06 2.53e-06 2.74e-06 4.6e-06 7.99e-06 6.98e-06 3.17e-06 1.24e-05 3.11e-06 4.46e-06 3.24e-06 8.25e-06 7.98e-06 4.77e-06 8.1e-07 1.29e-06 2.93e-06 3.56e-06 2.36e-06 1.73e-06 1.84e-06 1.59e-06 1.01e-06 9.9e-07 1.13e-05 1.02e-06 1.58e-07 7.66e-07 1.47e-06 1.12e-06 7.99e-07 4.32e-07
ENSG00000132780 NASP -299026 1.25e-06 9.3e-07 2.91e-07 4.72e-07 2.69e-07 4.51e-07 1.13e-06 3.25e-07 1.15e-06 3.71e-07 1.4e-06 5.83e-07 1.73e-06 2.57e-07 4.38e-07 7.19e-07 8.26e-07 5.63e-07 5.54e-07 6.25e-07 4.39e-07 1.17e-06 8.1e-07 5.98e-07 1.94e-06 3.47e-07 6.88e-07 7.68e-07 1.04e-06 1.11e-06 5.2e-07 1.56e-07 2.14e-07 4.54e-07 3.98e-07 4.47e-07 4.68e-07 1.24e-07 1.94e-07 9.07e-08 3.03e-07 1.57e-06 5.49e-08 4.22e-08 1.86e-07 1.11e-07 2.34e-07 8.42e-08 9.59e-08
ENSG00000159588 CCDC17 -339237 1.26e-06 8.72e-07 2.15e-07 3.19e-07 1.81e-07 3.22e-07 7.53e-07 2.71e-07 8.66e-07 2.81e-07 1.1e-06 6.07e-07 1.35e-06 2.19e-07 4.17e-07 4.84e-07 7.79e-07 5.31e-07 3.95e-07 3.93e-07 2.83e-07 7.26e-07 5.82e-07 3.96e-07 1.57e-06 2.4e-07 5.49e-07 5.27e-07 7.45e-07 9.25e-07 4.48e-07 3.86e-08 1.5e-07 2.35e-07 3.18e-07 3.32e-07 2.98e-07 1.42e-07 1.13e-07 9.61e-09 1.92e-07 1.13e-06 6.17e-08 2.62e-08 1.73e-07 7.03e-08 1.9e-07 8.58e-08 6.51e-08
ENSG00000159592 \N -403293 9.14e-07 6.46e-07 1.24e-07 3.95e-07 1.09e-07 2.54e-07 5.9e-07 1.56e-07 5.3e-07 2.8e-07 8.28e-07 4.55e-07 9.23e-07 1.59e-07 2.96e-07 2.85e-07 4.54e-07 4.11e-07 2.57e-07 1.82e-07 2.38e-07 4.66e-07 4.12e-07 2.19e-07 9.26e-07 2.74e-07 3.37e-07 3.51e-07 4.39e-07 6.81e-07 3.43e-07 3.99e-08 4.92e-08 1.52e-07 3.38e-07 1.52e-07 1.22e-07 1.09e-07 6.49e-08 2.22e-08 1.04e-07 6.95e-07 4.71e-08 5.8e-09 1.78e-07 2.07e-08 1.1e-07 3.84e-08 6.04e-08
ENSG00000162415 ZSWIM5 -21389 1.33e-05 1.57e-05 2.98e-06 9.4e-06 2.7e-06 6.64e-06 2.07e-05 2.9e-06 1.56e-05 7.84e-06 2.06e-05 7.68e-06 2.88e-05 6.24e-06 4.72e-06 9.29e-06 8.09e-06 1.25e-05 4.54e-06 4.19e-06 7.99e-06 1.45e-05 1.57e-05 5.33e-06 2.61e-05 5.23e-06 7.58e-06 6.91e-06 1.67e-05 1.74e-05 1.09e-05 1.19e-06 1.67e-06 4.49e-06 6.8e-06 4.16e-06 2.04e-06 2.7e-06 3.25e-06 2.38e-06 1.5e-06 1.99e-05 2.25e-06 3.05e-07 1.67e-06 2.52e-06 2.5e-06 1.24e-06 1.06e-06
ENSG00000222009 BTBD19 476338 6.8e-07 3.77e-07 8.9e-08 2.96e-07 9.82e-08 1.64e-07 4.42e-07 9.78e-08 3.03e-07 2.06e-07 4.39e-07 3.27e-07 5.39e-07 1.07e-07 1.51e-07 1.84e-07 2.07e-07 3.3e-07 1.62e-07 1.08e-07 1.86e-07 2.96e-07 3.02e-07 1.19e-07 5.53e-07 2.33e-07 2.23e-07 2.44e-07 2.76e-07 3.8e-07 1.95e-07 6.13e-08 5.51e-08 1.21e-07 2.32e-07 8.17e-08 1.1e-07 7.62e-08 5.54e-08 6.05e-08 5.38e-08 3.85e-07 2.67e-08 1.97e-08 1.17e-07 1.91e-08 7.89e-08 1.22e-08 5.56e-08
ENSG00000281912 LINC01144 -19090 1.4e-05 1.71e-05 3.15e-06 9.91e-06 2.95e-06 7.23e-06 2.21e-05 3.08e-06 1.64e-05 8.5e-06 2.18e-05 8.18e-06 3.08e-05 7.03e-06 5.14e-06 9.83e-06 8.74e-06 1.39e-05 4.95e-06 4.38e-06 8.39e-06 1.63e-05 1.69e-05 5.76e-06 2.73e-05 5.34e-06 7.95e-06 7.63e-06 1.77e-05 1.91e-05 1.18e-05 1.27e-06 1.74e-06 4.84e-06 7.28e-06 4.48e-06 2.24e-06 2.71e-06 3.4e-06 2.6e-06 1.58e-06 2.12e-05 2.43e-06 3.43e-07 1.87e-06 2.61e-06 2.74e-06 1.35e-06 1.23e-06