Genes within 1Mb (chr1:45281846:G:C):

View on , UCSC , GTEx , gnomAD


Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000070759 TESK2 -209317 sc-eQTL 8.67e-03 0.532 0.2 0.051 cDC L2
ENSG00000070785 EIF2B3 295124 sc-eQTL 1.94e-01 0.255 0.196 0.051 cDC L2
ENSG00000085998 POMGNT1 -938459 sc-eQTL 6.93e-01 0.0818 0.207 0.051 cDC L2
ENSG00000086015 MAST2 -505141 sc-eQTL 8.76e-01 0.0287 0.184 0.051 cDC L2
ENSG00000117419 ERI3 926586 sc-eQTL 5.44e-01 -0.13 0.214 0.051 cDC L2
ENSG00000117425 PTCH2 438593 sc-eQTL 1.49e-01 0.254 0.175 0.051 cDC L2
ENSG00000117448 AKR1A1 -268697 sc-eQTL 9.55e-01 -0.0112 0.196 0.051 cDC L2
ENSG00000117450 PRDX1 -241201 sc-eQTL 2.87e-01 0.155 0.145 0.051 cDC L2
ENSG00000126088 UROD 270896 sc-eQTL 9.51e-01 -0.0122 0.2 0.051 cDC L2
ENSG00000126106 TMEM53 607365 sc-eQTL 9.32e-01 -0.0164 0.192 0.051 cDC L2
ENSG00000126107 HECTD3 270522 sc-eQTL 1.52e-01 -0.325 0.226 0.051 cDC L2
ENSG00000132773 TOE1 -58206 sc-eQTL 2.53e-01 0.255 0.222 0.051 cDC L2
ENSG00000132780 NASP -302000 sc-eQTL 4.49e-01 0.153 0.202 0.051 cDC L2
ENSG00000132781 MUTYH -59047 sc-eQTL 8.66e-01 0.0351 0.208 0.051 cDC L2
ENSG00000142937 RPS8 506595 sc-eQTL 6.66e-01 0.0415 0.0959 0.051 cDC L2
ENSG00000159592 GPBP1L1 -406267 sc-eQTL 9.41e-01 0.0155 0.208 0.051 cDC L2
ENSG00000159596 TMEM69 -406335 sc-eQTL 2.33e-02 -0.473 0.207 0.051 cDC L2
ENSG00000173846 PLK3 481469 sc-eQTL 2.29e-01 0.168 0.14 0.051 cDC L2
ENSG00000187147 RNF220 876652 sc-eQTL 7.13e-03 0.494 0.182 0.051 cDC L2
ENSG00000197429 IPP -468807 sc-eQTL 7.36e-02 -0.313 0.174 0.051 cDC L2
ENSG00000198520 ARMH1 607154 sc-eQTL 7.25e-01 0.0765 0.218 0.051 cDC L2
ENSG00000222009 BTBD19 473364 sc-eQTL 5.79e-01 -0.108 0.195 0.051 cDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000086015 MAST2 -505141 eQTL 5.38e-11 0.326 0.0491 0.0 0.0 0.0397
ENSG00000117450 PRDX1 -241201 pQTL 0.0144 -0.108 0.044 0.00133 0.0 0.0387
ENSG00000126088 UROD 270896 pQTL 6.09e-06 0.171 0.0377 0.0 0.0 0.0387
ENSG00000126088 UROD 270896 eQTL 0.0327 0.113 0.0529 0.0 0.0 0.0397
ENSG00000132773 TOE1 -58206 eQTL 0.00375 -0.0978 0.0336 0.00115 0.00109 0.0397
ENSG00000132780 NASP -302000 eQTL 5.67e-07 -0.204 0.0406 0.0 0.0 0.0397
ENSG00000132781 MUTYH -58624 eQTL 0.0386 0.0694 0.0335 0.0 0.0 0.0397
ENSG00000159588 CCDC17 -342211 eQTL 2.12e-11 -0.24 0.0354 0.0 0.0 0.0397
ENSG00000162415 ZSWIM5 -24363 eQTL 0.0162 -0.128 0.0533 0.0 0.0 0.0397
ENSG00000197429 IPP -468804 eQTL 0.00969 -0.134 0.0516 0.0 0.0 0.0397
ENSG00000222009 BTBD19 473364 eQTL 0.000116 -0.144 0.0372 0.0 0.0 0.0397
ENSG00000234329 AL604028.2 -369980 eQTL 0.0308 -0.137 0.0632 0.0 0.0 0.0397
ENSG00000281912 LINC01144 -22064 eQTL 0.0104 0.219 0.0855 0.0 0.0 0.0397


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000086015 MAST2 -505141 3.92e-07 2.89e-07 6.41e-08 2.87e-07 1.05e-07 1.25e-07 2.95e-07 5.68e-08 1.89e-07 1.05e-07 2.38e-07 1.31e-07 2.74e-07 8.54e-08 6.12e-08 1.01e-07 6.63e-08 2.15e-07 9.71e-08 6.02e-08 1.33e-07 1.98e-07 2e-07 3.83e-08 3.14e-07 1.86e-07 1.25e-07 1.28e-07 1.44e-07 1.81e-07 1.39e-07 4.29e-08 3.8e-08 9.3e-08 5.5e-08 3.05e-08 6.67e-08 5.71e-08 4.83e-08 7.9e-08 4.53e-08 2.43e-07 1.67e-08 1.54e-08 5.4e-08 1.55e-08 7.26e-08 2.1e-09 4.61e-08
ENSG00000117425 \N 438593 6.8e-07 5.18e-07 8.9e-08 3.92e-07 1.05e-07 1.74e-07 4.14e-07 7.12e-08 2.56e-07 1.6e-07 4.39e-07 1.91e-07 4.54e-07 1.01e-07 1.01e-07 1.49e-07 1.38e-07 2.9e-07 1.89e-07 7.54e-08 1.8e-07 2.63e-07 2.81e-07 1.06e-07 5.75e-07 2.33e-07 1.78e-07 1.7e-07 2.19e-07 3.52e-07 1.95e-07 8.25e-08 5.07e-08 1.01e-07 1.56e-07 4.95e-08 1.14e-07 7.75e-08 5.62e-08 5.61e-08 2.78e-08 4.04e-07 4.53e-08 5.93e-09 9.64e-08 9.86e-09 9.19e-08 0.0 5.71e-08
ENSG00000126088 UROD 270896 1.21e-06 1.09e-06 3.3e-07 1.21e-06 2.46e-07 5.87e-07 1.49e-06 3.3e-07 1.25e-06 4.11e-07 1.75e-06 6.19e-07 2e-06 3.07e-07 4.38e-07 7.95e-07 8.13e-07 5.45e-07 8.61e-07 6.25e-07 6.36e-07 1.33e-06 8.84e-07 6.23e-07 2.27e-06 4.31e-07 7.66e-07 6.51e-07 1.24e-06 1.29e-06 6.04e-07 1.56e-07 1.94e-07 4.57e-07 4.49e-07 3.38e-07 5.04e-07 2.29e-07 3.48e-07 3.2e-07 2.97e-07 1.65e-06 2.91e-07 1.3e-07 1.74e-07 6.87e-08 1.86e-07 8.88e-08 9.51e-08
ENSG00000132773 TOE1 -58206 1.41e-05 1.24e-05 1.67e-06 6.54e-06 2.42e-06 5.81e-06 1.37e-05 1.86e-06 9.97e-06 5.45e-06 1.39e-05 5.61e-06 1.7e-05 3.97e-06 2.89e-06 6.6e-06 4.98e-06 8.03e-06 2.93e-06 2.85e-06 6.03e-06 1.04e-05 9.75e-06 3.29e-06 1.8e-05 4.43e-06 5.53e-06 4.51e-06 1.22e-05 9.37e-06 6.24e-06 1.11e-06 1.25e-06 3.01e-06 4.62e-06 2.28e-06 1.67e-06 1.94e-06 1.89e-06 9.77e-07 8.85e-07 1.51e-05 1.68e-06 1.32e-07 7.6e-07 1.57e-06 1.31e-06 6.93e-07 5.22e-07
ENSG00000132780 NASP -302000 1.29e-06 9.88e-07 2.93e-07 9.29e-07 1.38e-07 4.9e-07 1.08e-06 2.28e-07 1.08e-06 3.24e-07 1.35e-06 5.51e-07 1.46e-06 2.72e-07 4.05e-07 5.81e-07 7.72e-07 5.27e-07 6.18e-07 3.93e-07 3.8e-07 9.64e-07 7.95e-07 4.87e-07 1.94e-06 3.17e-07 6.38e-07 4.75e-07 8.56e-07 1.07e-06 5.43e-07 3.9e-08 1.18e-07 2.35e-07 3.21e-07 2.13e-07 4.12e-07 1.24e-07 1.48e-07 8.93e-08 1.67e-07 1.51e-06 1.22e-07 7.3e-08 1.59e-07 3.87e-08 1.71e-07 5.66e-08 6.58e-08
ENSG00000159588 CCDC17 -342211 1.31e-06 9.37e-07 1.87e-07 3.89e-07 1.12e-07 3.3e-07 7.02e-07 1.45e-07 6.52e-07 3.1e-07 1.1e-06 4.28e-07 1.05e-06 2.1e-07 3e-07 3.57e-07 5.64e-07 4.27e-07 3.98e-07 1.97e-07 2.38e-07 5.36e-07 5.41e-07 3.06e-07 1.49e-06 2.38e-07 4.37e-07 3.24e-07 5.7e-07 8.5e-07 4.08e-07 4.06e-08 5.86e-08 1.73e-07 3.7e-07 1.18e-07 2.46e-07 1.21e-07 7.42e-08 1.84e-08 1.16e-07 1.05e-06 5.49e-08 4.15e-08 2e-07 1.25e-08 1.23e-07 1.77e-08 6.12e-08
ENSG00000159592 \N -406267 8.21e-07 6.42e-07 1.07e-07 4.43e-07 1.08e-07 2.24e-07 5.2e-07 7.79e-08 3.32e-07 2.06e-07 6.39e-07 2.33e-07 6.08e-07 1.23e-07 1.45e-07 1.96e-07 2.48e-07 3.3e-07 2.56e-07 9.01e-08 1.97e-07 3.15e-07 3.3e-07 1.32e-07 7.72e-07 2.49e-07 2.24e-07 1.97e-07 3e-07 5.28e-07 2.54e-07 7.5e-08 6.08e-08 1.27e-07 2.61e-07 5.41e-08 8.28e-08 9.33e-08 5.67e-08 2.65e-08 5.23e-08 5.79e-07 6.04e-08 1.27e-08 1.14e-07 8.59e-09 9.73e-08 2.89e-09 5.43e-08
ENSG00000162415 ZSWIM5 -24363 3.54e-05 2.43e-05 4.1e-06 1.21e-05 3.26e-06 1.23e-05 3.09e-05 3.36e-06 1.87e-05 9.43e-06 2.55e-05 9.35e-06 3.45e-05 8.95e-06 5.23e-06 1.13e-05 1.01e-05 1.75e-05 5.66e-06 4.81e-06 9.45e-06 2.11e-05 2.11e-05 5.39e-06 3.11e-05 5.72e-06 8.23e-06 8.17e-06 2.21e-05 1.83e-05 1.28e-05 1.56e-06 1.73e-06 4.39e-06 8.09e-06 3.89e-06 1.91e-06 2.72e-06 3.24e-06 2.27e-06 1.36e-06 2.73e-05 2.76e-06 2.73e-07 1.98e-06 2.56e-06 2.95e-06 1.17e-06 9.75e-07
ENSG00000222009 BTBD19 473364 5.14e-07 3.55e-07 7.87e-08 3.58e-07 1.07e-07 1.54e-07 3.44e-07 5.89e-08 2.04e-07 1.21e-07 3.21e-07 1.52e-07 3.6e-07 8.85e-08 7.35e-08 1.14e-07 8.53e-08 2.43e-07 1.51e-07 8e-08 1.59e-07 2.24e-07 2.33e-07 5.6e-08 4.11e-07 2.01e-07 1.39e-07 1.46e-07 1.6e-07 2.26e-07 1.76e-07 5.3e-08 4.97e-08 1.02e-07 9.25e-08 3.43e-08 8.07e-08 6.2e-08 4.78e-08 7.67e-08 4.73e-08 2.9e-07 2.88e-08 1.11e-08 8.06e-08 6.53e-09 9.07e-08 0.0 4.82e-08
ENSG00000281912 LINC01144 -22064 3.75e-05 2.56e-05 4.26e-06 1.24e-05 3.42e-06 1.29e-05 3.25e-05 3.42e-06 2e-05 9.96e-06 2.71e-05 9.81e-06 3.59e-05 9.29e-06 5.35e-06 1.18e-05 1.05e-05 1.87e-05 5.97e-06 5.18e-06 9.65e-06 2.26e-05 2.22e-05 5.66e-06 3.23e-05 5.97e-06 8.81e-06 8.54e-06 2.34e-05 1.93e-05 1.29e-05 1.67e-06 1.9e-06 4.8e-06 8.6e-06 4.01e-06 2.04e-06 2.83e-06 3.31e-06 2.42e-06 1.52e-06 2.84e-05 2.86e-06 2.85e-07 2.06e-06 2.61e-06 3.11e-06 1.26e-06 1.02e-06