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Genes within 1Mb (chr1:45115362:G:A):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000070759 TESK2 -375801 sc-eQTL 4.48e-01 0.153 0.202 0.05 CD4_CTL L2
ENSG00000070785 EIF2B3 128640 sc-eQTL 8.98e-01 0.0285 0.222 0.05 CD4_CTL L2
ENSG00000086015 MAST2 -671625 sc-eQTL 5.69e-01 -0.112 0.197 0.05 CD4_CTL L2
ENSG00000117419 ERI3 760102 sc-eQTL 8.10e-01 -0.0537 0.223 0.05 CD4_CTL L2
ENSG00000117448 AKR1A1 -435181 sc-eQTL 2.22e-01 -0.279 0.228 0.05 CD4_CTL L2
ENSG00000117450 PRDX1 -407685 sc-eQTL 6.94e-01 -0.0659 0.167 0.05 CD4_CTL L2
ENSG00000126088 UROD 104412 sc-eQTL 4.00e-01 -0.186 0.221 0.05 CD4_CTL L2
ENSG00000126107 HECTD3 104038 sc-eQTL 2.67e-01 -0.237 0.213 0.05 CD4_CTL L2
ENSG00000132773 TOE1 -224690 sc-eQTL 3.49e-01 -0.199 0.212 0.05 CD4_CTL L2
ENSG00000132780 NASP -468484 sc-eQTL 5.46e-01 -0.121 0.2 0.05 CD4_CTL L2
ENSG00000132781 MUTYH -225531 sc-eQTL 6.75e-01 0.0914 0.217 0.05 CD4_CTL L2
ENSG00000142937 RPS8 340111 sc-eQTL 8.64e-03 -0.237 0.0892 0.05 CD4_CTL L2
ENSG00000159592 GPBP1L1 -572751 sc-eQTL 1.68e-01 0.291 0.21 0.05 CD4_CTL L2
ENSG00000159596 TMEM69 -572819 sc-eQTL 2.26e-01 -0.252 0.208 0.05 CD4_CTL L2
ENSG00000162415 ZSWIM5 -190847 sc-eQTL 9.20e-01 -0.0193 0.192 0.05 CD4_CTL L2
ENSG00000173846 PLK3 314985 sc-eQTL 9.38e-01 0.0124 0.16 0.05 CD4_CTL L2
ENSG00000178028 DMAP1 901907 sc-eQTL 4.50e-01 -0.172 0.227 0.05 CD4_CTL L2
ENSG00000187147 RNF220 710168 sc-eQTL 9.84e-01 0.00353 0.18 0.05 CD4_CTL L2
ENSG00000197429 IPP -635291 sc-eQTL 4.37e-01 -0.173 0.222 0.05 CD4_CTL L2
ENSG00000198520 ARMH1 440670 sc-eQTL 3.92e-01 0.141 0.164 0.05 CD4_CTL L2
ENSG00000070759 TESK2 -375801 sc-eQTL 7.22e-01 0.0773 0.217 0.051 CD8_TCM L2
ENSG00000070785 EIF2B3 128640 sc-eQTL 9.78e-01 0.00625 0.223 0.051 CD8_TCM L2
ENSG00000086015 MAST2 -671625 sc-eQTL 4.94e-01 0.142 0.208 0.051 CD8_TCM L2
ENSG00000117419 ERI3 760102 sc-eQTL 5.51e-02 0.433 0.225 0.051 CD8_TCM L2
ENSG00000117448 AKR1A1 -435181 sc-eQTL 5.98e-01 0.111 0.21 0.051 CD8_TCM L2
ENSG00000117450 PRDX1 -407685 sc-eQTL 1.69e-01 -0.217 0.157 0.051 CD8_TCM L2
ENSG00000126088 UROD 104412 sc-eQTL 7.35e-01 -0.0731 0.216 0.051 CD8_TCM L2
ENSG00000126107 HECTD3 104038 sc-eQTL 3.88e-01 -0.197 0.227 0.051 CD8_TCM L2
ENSG00000132773 TOE1 -224690 sc-eQTL 2.19e-01 -0.249 0.202 0.051 CD8_TCM L2
ENSG00000132780 NASP -468484 sc-eQTL 7.65e-01 -0.0524 0.175 0.051 CD8_TCM L2
ENSG00000132781 MUTYH -225531 sc-eQTL 8.66e-01 -0.0391 0.232 0.051 CD8_TCM L2
ENSG00000142937 RPS8 340111 sc-eQTL 6.48e-01 -0.0523 0.114 0.051 CD8_TCM L2
ENSG00000159592 GPBP1L1 -572751 sc-eQTL 6.58e-02 -0.383 0.207 0.051 CD8_TCM L2
ENSG00000159596 TMEM69 -572819 sc-eQTL 3.80e-02 -0.457 0.219 0.051 CD8_TCM L2
ENSG00000162415 ZSWIM5 -190847 sc-eQTL 6.07e-01 -0.103 0.2 0.051 CD8_TCM L2
ENSG00000173846 PLK3 314985 sc-eQTL 8.16e-02 -0.263 0.15 0.051 CD8_TCM L2
ENSG00000178028 DMAP1 901907 sc-eQTL 4.52e-01 0.171 0.227 0.051 CD8_TCM L2
ENSG00000187147 RNF220 710168 sc-eQTL 7.45e-01 0.0618 0.19 0.051 CD8_TCM L2
ENSG00000197429 IPP -635291 sc-eQTL 7.33e-03 -0.577 0.213 0.051 CD8_TCM L2
ENSG00000198520 ARMH1 440670 sc-eQTL 9.91e-01 -0.00195 0.182 0.051 CD8_TCM L2
ENSG00000070759 TESK2 -375801 sc-eQTL 4.00e-01 0.176 0.209 0.051 NK_CD56bright L2
ENSG00000070785 EIF2B3 128640 sc-eQTL 5.31e-01 0.14 0.223 0.051 NK_CD56bright L2
ENSG00000086015 MAST2 -671625 sc-eQTL 8.05e-01 0.0521 0.21 0.051 NK_CD56bright L2
ENSG00000117419 ERI3 760102 sc-eQTL 1.34e-02 0.553 0.222 0.051 NK_CD56bright L2
ENSG00000117448 AKR1A1 -435181 sc-eQTL 9.86e-02 0.337 0.203 0.051 NK_CD56bright L2
ENSG00000117450 PRDX1 -407685 sc-eQTL 4.52e-01 0.146 0.194 0.051 NK_CD56bright L2
ENSG00000126088 UROD 104412 sc-eQTL 8.44e-01 0.0379 0.192 0.051 NK_CD56bright L2
ENSG00000126106 TMEM53 440881 sc-eQTL 5.64e-01 0.124 0.214 0.051 NK_CD56bright L2
ENSG00000126107 HECTD3 104038 sc-eQTL 5.42e-01 0.133 0.218 0.051 NK_CD56bright L2
ENSG00000132773 TOE1 -224690 sc-eQTL 3.63e-01 0.183 0.201 0.051 NK_CD56bright L2
ENSG00000132780 NASP -468484 sc-eQTL 3.12e-01 -0.194 0.191 0.051 NK_CD56bright L2
ENSG00000132781 MUTYH -225531 sc-eQTL 4.07e-01 0.196 0.236 0.051 NK_CD56bright L2
ENSG00000142937 RPS8 340111 sc-eQTL 8.97e-01 -0.0135 0.104 0.051 NK_CD56bright L2
ENSG00000159592 GPBP1L1 -572751 sc-eQTL 7.11e-01 0.0816 0.22 0.051 NK_CD56bright L2
ENSG00000159596 TMEM69 -572819 sc-eQTL 2.31e-01 -0.249 0.207 0.051 NK_CD56bright L2
ENSG00000162415 ZSWIM5 -190847 sc-eQTL 6.28e-01 -0.0926 0.191 0.051 NK_CD56bright L2
ENSG00000173846 PLK3 314985 sc-eQTL 7.13e-01 -0.0723 0.196 0.051 NK_CD56bright L2
ENSG00000178028 DMAP1 901907 sc-eQTL 4.99e-01 -0.158 0.233 0.051 NK_CD56bright L2
ENSG00000187147 RNF220 710168 sc-eQTL 8.26e-01 -0.0425 0.194 0.051 NK_CD56bright L2
ENSG00000197429 IPP -635291 sc-eQTL 1.76e-01 -0.3 0.221 0.051 NK_CD56bright L2
ENSG00000070759 TESK2 -375801 sc-eQTL 3.30e-01 0.198 0.202 0.07 PB L2
ENSG00000070785 EIF2B3 128640 sc-eQTL 4.87e-01 -0.12 0.173 0.07 PB L2
ENSG00000086015 MAST2 -671625 sc-eQTL 7.23e-01 -0.0769 0.217 0.07 PB L2
ENSG00000117419 ERI3 760102 sc-eQTL 5.89e-01 0.114 0.21 0.07 PB L2
ENSG00000117425 PTCH2 272109 sc-eQTL 1.67e-01 -0.274 0.197 0.07 PB L2
ENSG00000117448 AKR1A1 -435181 sc-eQTL 7.20e-01 0.0403 0.112 0.07 PB L2
ENSG00000117450 PRDX1 -407685 sc-eQTL 9.82e-01 0.00229 0.101 0.07 PB L2
ENSG00000126088 UROD 104412 sc-eQTL 1.68e-01 -0.208 0.15 0.07 PB L2
ENSG00000126106 TMEM53 440881 sc-eQTL 6.58e-01 -0.0897 0.202 0.07 PB L2
ENSG00000126107 HECTD3 104038 sc-eQTL 2.09e-01 0.21 0.166 0.07 PB L2
ENSG00000132773 TOE1 -224690 sc-eQTL 7.66e-01 -0.0642 0.215 0.07 PB L2
ENSG00000132780 NASP -468484 sc-eQTL 6.95e-01 -0.0885 0.225 0.07 PB L2
ENSG00000132781 MUTYH -225531 sc-eQTL 8.56e-01 0.0429 0.235 0.07 PB L2
ENSG00000142937 RPS8 340111 sc-eQTL 6.48e-01 -0.0515 0.113 0.07 PB L2
ENSG00000159592 GPBP1L1 -572751 sc-eQTL 1.52e-01 0.333 0.231 0.07 PB L2
ENSG00000159596 TMEM69 -572819 sc-eQTL 9.67e-01 0.00814 0.194 0.07 PB L2
ENSG00000173846 PLK3 314985 sc-eQTL 6.64e-01 -0.0904 0.207 0.07 PB L2
ENSG00000178028 DMAP1 901907 sc-eQTL 7.75e-01 0.0686 0.24 0.07 PB L2
ENSG00000187147 RNF220 710168 sc-eQTL 4.45e-01 0.153 0.199 0.07 PB L2
ENSG00000197429 IPP -635291 sc-eQTL 4.40e-01 0.17 0.22 0.07 PB L2
ENSG00000198520 ARMH1 440670 sc-eQTL 4.14e-01 0.148 0.181 0.07 PB L2
ENSG00000280670 CCDC163 -384717 sc-eQTL 7.70e-01 -0.0509 0.174 0.07 PB L2
ENSG00000070759 TESK2 -375801 sc-eQTL 5.24e-01 0.135 0.211 0.05 Pro_T L2
ENSG00000070785 EIF2B3 128640 sc-eQTL 3.46e-02 -0.396 0.186 0.05 Pro_T L2
ENSG00000086015 MAST2 -671625 sc-eQTL 8.76e-01 -0.0314 0.201 0.05 Pro_T L2
ENSG00000117419 ERI3 760102 sc-eQTL 3.06e-01 -0.207 0.201 0.05 Pro_T L2
ENSG00000117448 AKR1A1 -435181 sc-eQTL 8.79e-01 0.0216 0.142 0.05 Pro_T L2
ENSG00000117450 PRDX1 -407685 sc-eQTL 6.47e-01 -0.0564 0.123 0.05 Pro_T L2
ENSG00000126088 UROD 104412 sc-eQTL 6.54e-01 -0.0788 0.176 0.05 Pro_T L2
ENSG00000126106 TMEM53 440881 sc-eQTL 9.83e-02 0.329 0.198 0.05 Pro_T L2
ENSG00000126107 HECTD3 104038 sc-eQTL 3.85e-01 -0.176 0.203 0.05 Pro_T L2
ENSG00000132773 TOE1 -224690 sc-eQTL 4.11e-01 0.175 0.212 0.05 Pro_T L2
ENSG00000132780 NASP -468484 sc-eQTL 7.29e-01 0.0374 0.108 0.05 Pro_T L2
ENSG00000132781 MUTYH -225531 sc-eQTL 6.03e-01 -0.112 0.215 0.05 Pro_T L2
ENSG00000142937 RPS8 340111 sc-eQTL 5.91e-01 -0.0461 0.0856 0.05 Pro_T L2
ENSG00000142945 KIF2C 375544 sc-eQTL 3.71e-01 -0.12 0.134 0.05 Pro_T L2
ENSG00000159592 GPBP1L1 -572751 sc-eQTL 2.63e-01 -0.238 0.212 0.05 Pro_T L2
ENSG00000159596 TMEM69 -572819 sc-eQTL 8.45e-01 -0.0377 0.192 0.05 Pro_T L2
ENSG00000162415 ZSWIM5 -190847 sc-eQTL 9.94e-01 0.00121 0.169 0.05 Pro_T L2
ENSG00000173846 PLK3 314985 sc-eQTL 8.17e-01 -0.0421 0.182 0.05 Pro_T L2
ENSG00000178028 DMAP1 901907 sc-eQTL 1.23e-01 -0.34 0.22 0.05 Pro_T L2
ENSG00000186603 HPDL -211533 sc-eQTL 1.51e-01 0.178 0.123 0.05 Pro_T L2
ENSG00000187147 RNF220 710168 sc-eQTL 9.70e-01 0.00627 0.165 0.05 Pro_T L2
ENSG00000197429 IPP -635291 sc-eQTL 7.26e-01 0.0776 0.221 0.05 Pro_T L2
ENSG00000198520 ARMH1 440670 sc-eQTL 6.61e-01 0.0617 0.14 0.05 Pro_T L2
ENSG00000280670 CCDC163 -384717 sc-eQTL 3.10e-01 0.169 0.166 0.05 Pro_T L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000117425 PTCH2 272109 eQTL 0.0199 0.125 0.0537 0.00135 0.0 0.0491
ENSG00000126088 UROD 104412 pQTL 0.0188 0.0783 0.0333 0.0 0.0 0.0509
ENSG00000126088 UROD 104412 eQTL 6.15e-05 0.189 0.0469 0.0 0.0 0.0491
ENSG00000126107 HECTD3 104038 eQTL 0.0136 0.0938 0.0379 0.0 0.0 0.0491
ENSG00000159588 CCDC17 -508695 eQTL 0.429 0.0256 0.0323 0.00118 0.0 0.0491
ENSG00000188396 TCTEX1D4 308687 eQTL 0.0137 -0.0748 0.0303 0.0 0.0 0.0491
ENSG00000198520 ARMH1 440649 eQTL 0.000139 0.153 0.0401 0.00792 0.00458 0.0491
ENSG00000222009 BTBD19 306880 eQTL 3.36e-05 -0.138 0.0332 0.0 0.0 0.0491
ENSG00000281912 LINC01144 -188548 eQTL 0.0294 0.167 0.0764 0.0 0.0 0.0491

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina