Genes within 1Mb (chr1:44998617:C:T):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000117450 PRDX1 -524430 eQTL 6.82e-03 -0.0345 0.0127 0.0 0.0 0.288
ENSG00000126088 UROD -12333 pQTL 1.66e-117 -0.331 0.013 0.0 0.0642 0.294
ENSG00000126088 UROD -12333 eQTL 4.38e-56 -0.341 0.0202 0.0 0.00164 0.288
ENSG00000132781 MUTYH -341853 eQTL 1.57e-02 0.0352 0.0145 0.0 0.0 0.288
ENSG00000142945 KIF2C 258799 eQTL 1.20e-09 -0.112 0.0182 0.0 0.0 0.288
ENSG00000142959 BEST4 210447 eQTL 7.02e-03 0.0831 0.0308 0.0 0.0 0.288
ENSG00000173846 PLK3 198240 eQTL 3.91e-10 -0.0782 0.0124 0.0 0.0 0.288
ENSG00000186603 HPDL -328288 eQTL 2.94e-02 0.0655 0.0301 0.00129 0.0 0.288
ENSG00000188396 TCTEX1D4 191942 eQTL 4.87e-02 0.0291 0.0148 0.0 0.0 0.288
ENSG00000198520 ARMH1 323904 eQTL 5.71e-03 -0.0542 0.0196 0.0 0.0 0.288
ENSG00000222009 BTBD19 190135 eQTL 2.04e-04 0.0604 0.0162 0.0 0.0 0.288


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000070759 \N -492546 6.97e-07 4.63e-07 1.05e-07 3.58e-07 9.29e-08 1.74e-07 5.13e-07 1.11e-07 3.62e-07 2.16e-07 5.29e-07 3.3e-07 6.47e-07 1.1e-07 1.57e-07 1.96e-07 2.53e-07 3.56e-07 1.97e-07 1.28e-07 1.87e-07 3.1e-07 3.11e-07 1.32e-07 6.59e-07 2.39e-07 2.22e-07 2.01e-07 3.58e-07 5.56e-07 2.55e-07 7.59e-08 5.6e-08 1.25e-07 2.55e-07 7.56e-08 1.03e-07 8.04e-08 6.29e-08 3.58e-08 6.39e-08 4.02e-07 2.67e-08 1.11e-08 1.23e-07 1.81e-08 8.24e-08 7.25e-09 5.43e-08
ENSG00000117450 PRDX1 -524430 5.74e-07 3.35e-07 8.9e-08 2.87e-07 1.13e-07 1.57e-07 4.25e-07 9.78e-08 2.78e-07 1.89e-07 4.13e-07 2.8e-07 5.39e-07 1.01e-07 1.32e-07 1.61e-07 1.85e-07 3.04e-07 1.69e-07 8.86e-08 1.68e-07 2.7e-07 2.77e-07 1.17e-07 5.15e-07 2.33e-07 1.85e-07 1.85e-07 2.76e-07 4.3e-07 2e-07 8.14e-08 5.73e-08 1.21e-07 1.76e-07 6.33e-08 8.07e-08 7.98e-08 4.11e-08 5.88e-08 4.4e-08 3.26e-07 1.96e-08 1.54e-08 1.1e-07 1.3e-08 9.46e-08 3.09e-09 5.44e-08
ENSG00000126088 UROD -12333 1.69e-05 2.15e-05 4.54e-06 1.27e-05 4.14e-06 1.05e-05 3.12e-05 3.67e-06 2.01e-05 1.02e-05 2.66e-05 1.04e-05 3.74e-05 9.56e-06 5.6e-06 1.18e-05 1.27e-05 1.81e-05 6.95e-06 5.95e-06 1.05e-05 2.19e-05 2.19e-05 8.53e-06 3.32e-05 5.96e-06 8.36e-06 9e-06 2.39e-05 2.88e-05 1.31e-05 1.62e-06 2.57e-06 6.84e-06 9.27e-06 5.61e-06 3.2e-06 3.14e-06 4.95e-06 3.48e-06 1.71e-06 2.67e-05 2.67e-06 4.26e-07 2.16e-06 3.07e-06 3.43e-06 1.46e-06 1.51e-06
ENSG00000126106 \N 324136 1.26e-06 9.25e-07 2.91e-07 5.24e-07 2.76e-07 4.67e-07 1.22e-06 3.46e-07 1.16e-06 3.82e-07 1.35e-06 5.97e-07 1.76e-06 2.59e-07 4.26e-07 7e-07 8.01e-07 5.8e-07 6.4e-07 6.44e-07 3.99e-07 1.08e-06 8.27e-07 5.82e-07 1.95e-06 3.71e-07 6.18e-07 5.67e-07 1.17e-06 1.23e-06 5.79e-07 4.97e-08 2.29e-07 5.45e-07 4.25e-07 3.94e-07 4.21e-07 1.54e-07 3.33e-07 1.04e-07 2.85e-07 1.43e-06 5.33e-08 6.55e-08 1.88e-07 7.84e-08 2.09e-07 8.31e-08 8.44e-08
ENSG00000132781 MUTYH -341853 1.26e-06 9.09e-07 3.06e-07 3.65e-07 2.48e-07 4.12e-07 1.08e-06 3.45e-07 1.12e-06 3.85e-07 1.33e-06 5.6e-07 1.58e-06 2.54e-07 4.41e-07 5.87e-07 7.74e-07 5.66e-07 5.31e-07 4.95e-07 3.49e-07 9.46e-07 7.63e-07 5.1e-07 1.86e-06 2.99e-07 6.23e-07 5.31e-07 9.65e-07 1.11e-06 5.42e-07 3.8e-08 1.82e-07 4.16e-07 3.67e-07 3.22e-07 3.62e-07 1.25e-07 2.19e-07 7.62e-08 2.71e-07 1.26e-06 6.58e-08 5.7e-08 1.81e-07 7.22e-08 1.7e-07 8.43e-08 8.38e-08
ENSG00000142945 KIF2C 258799 1.27e-06 1.19e-06 2.29e-07 1.18e-06 3.73e-07 6.06e-07 1.51e-06 4.08e-07 1.66e-06 5.86e-07 2.04e-06 8.48e-07 2.55e-06 2.79e-07 5.04e-07 9.85e-07 1.02e-06 9.1e-07 6.75e-07 5.08e-07 7.8e-07 1.82e-06 1.11e-06 6.29e-07 2.41e-06 7.64e-07 9.45e-07 9.09e-07 1.64e-06 1.32e-06 8.17e-07 2.39e-07 2.86e-07 5.82e-07 5.38e-07 4.3e-07 7.24e-07 3.07e-07 5.11e-07 3.34e-07 2.71e-07 1.58e-06 1.39e-07 1.57e-07 2.87e-07 1.72e-07 2.3e-07 5.98e-08 1.91e-07
ENSG00000142959 BEST4 210447 1.65e-06 2.19e-06 2.79e-07 1.35e-06 4.39e-07 7.23e-07 1.31e-06 4.41e-07 1.76e-06 7.98e-07 1.83e-06 1.34e-06 3.07e-06 8.7e-07 4.02e-07 1.06e-06 9.22e-07 1.35e-06 6.7e-07 7.37e-07 6.56e-07 1.95e-06 1.77e-06 9.37e-07 2.59e-06 1.12e-06 1.01e-06 1.07e-06 1.69e-06 1.66e-06 8.36e-07 2.46e-07 3.99e-07 8.88e-07 8.57e-07 5.92e-07 6.46e-07 3.9e-07 7.31e-07 2.18e-07 3.04e-07 2.63e-06 3.74e-07 2.06e-07 3.67e-07 3.21e-07 4.03e-07 2.52e-07 2.91e-07
ENSG00000173846 PLK3 198240 1.91e-06 2.43e-06 2.59e-07 1.53e-06 4.49e-07 7.77e-07 1.52e-06 5.72e-07 1.67e-06 7.73e-07 2.02e-06 1.48e-06 3.42e-06 1.01e-06 5.03e-07 1.23e-06 9.71e-07 1.55e-06 7.66e-07 1.04e-06 8.12e-07 2.18e-06 2e-06 1.02e-06 3.04e-06 1.21e-06 1.1e-06 1.17e-06 1.86e-06 1.88e-06 1.15e-06 2.84e-07 4.3e-07 1.1e-06 9e-07 6.66e-07 7.44e-07 4.37e-07 9.58e-07 2.76e-07 2.14e-07 2.75e-06 4.36e-07 1.89e-07 3.39e-07 2.95e-07 4.32e-07 2.64e-07 2.68e-07
ENSG00000222009 BTBD19 190135 2.08e-06 2.68e-06 2.51e-07 1.63e-06 4.67e-07 7.9e-07 1.8e-06 5.91e-07 1.76e-06 8.55e-07 2.27e-06 1.35e-06 3.53e-06 1.22e-06 5.7e-07 1.15e-06 1.06e-06 1.79e-06 9.43e-07 1.16e-06 9.18e-07 2.44e-06 2.11e-06 1e-06 3.5e-06 1.3e-06 1.22e-06 1.39e-06 1.99e-06 1.83e-06 1.45e-06 2.46e-07 5.85e-07 1.25e-06 9.16e-07 7.45e-07 7.42e-07 3.7e-07 1.11e-06 3.33e-07 1.67e-07 2.98e-06 3.75e-07 1.95e-07 3.61e-07 3.47e-07 4.86e-07 2.19e-07 2.14e-07