Genes within 1Mb (chr1:44854292:A:C):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000126088 UROD -156658 pQTL 3.48e-46 -0.204 0.0137 0.0 0.0 0.457
ENSG00000126088 UROD -156658 eQTL 6.36e-19 -0.182 0.0201 0.0 0.0 0.456
ENSG00000126106 TMEM53 179811 eQTL 4.25e-01 -0.0207 0.026 0.00143 0.0 0.456
ENSG00000132763 MMACHC -646008 eQTL 3.53e-02 0.0646 0.0307 0.0 0.0 0.456
ENSG00000142945 KIF2C 114474 eQTL 3.09e-11 -0.111 0.0165 0.0 0.0 0.456
ENSG00000142959 BEST4 66122 eQTL 1.24e-04 0.107 0.0278 0.00588 0.00487 0.456
ENSG00000173846 PLK3 53915 eQTL 2.87e-04 -0.0415 0.0114 0.0 0.0 0.456
ENSG00000188396 TCTEX1D4 47617 eQTL 5.84e-01 0.00736 0.0134 0.0 0.00741 0.456
ENSG00000198520 ARMH1 179579 eQTL 8.41e-05 -0.0699 0.0177 0.00109 0.0 0.456
ENSG00000222009 BTBD19 45810 eQTL 5.87e-04 -0.0507 0.0147 0.0202 0.0 0.456
ENSG00000234093 RPS15AP11 73577 eQTL 3.27e-02 0.0749 0.035 0.0 0.0 0.456
ENSG00000280670 CCDC163 -645787 eQTL 6.62e-08 0.2 0.0368 0.0 0.0 0.456


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000117410 \N 879805 4.37e-07 1.78e-07 8.51e-08 2.25e-07 1.03e-07 1.25e-07 3.25e-07 8.11e-08 2.53e-07 1.46e-07 2.47e-07 2.04e-07 3.48e-07 8.54e-08 9.12e-08 1.26e-07 8.74e-08 2.75e-07 9.69e-08 8.1e-08 1.48e-07 2.3e-07 2.04e-07 4.25e-08 2.99e-07 2.2e-07 1.72e-07 1.46e-07 1.58e-07 1.58e-07 1.39e-07 5.08e-08 4.86e-08 1.17e-07 7.44e-08 5.14e-08 6.2e-08 5.71e-08 4.75e-08 7.65e-08 4.9e-08 1.62e-07 3.65e-08 7.72e-09 3.71e-08 9.65e-09 9.19e-08 0.0 4.47e-08
ENSG00000126088 UROD -156658 5.11e-06 5.07e-06 9.68e-07 3.52e-06 1.83e-06 1.53e-06 7.23e-06 1.45e-06 4.62e-06 3.15e-06 6.99e-06 2.88e-06 8.85e-06 1.75e-06 9.81e-07 4.58e-06 2.78e-06 3.93e-06 1.92e-06 2.01e-06 3.12e-06 6.71e-06 4.72e-06 1.93e-06 8.55e-06 2.38e-06 3.35e-06 1.76e-06 5.81e-06 4.67e-06 2.56e-06 7.72e-07 7.42e-07 2.75e-06 1.99e-06 1.61e-06 1.39e-06 7.41e-07 1.12e-06 8.18e-07 1e-06 6.66e-06 6.73e-07 1.47e-07 6.9e-07 8.79e-07 9.16e-07 7.23e-07 4.77e-07
ENSG00000132763 MMACHC -646008 9.36e-07 5.18e-07 1.63e-07 3.48e-07 1.12e-07 2.42e-07 5.8e-07 2e-07 6.27e-07 2.88e-07 7.67e-07 4.55e-07 8.37e-07 1.49e-07 3e-07 3.36e-07 4.73e-07 4.24e-07 2.79e-07 1.97e-07 2.51e-07 5.17e-07 3.87e-07 1.91e-07 8.33e-07 2.53e-07 3.93e-07 2.59e-07 4.33e-07 5.17e-07 3.1e-07 5.93e-08 5.31e-08 1.77e-07 3.3e-07 1.55e-07 1.05e-07 1.09e-07 6.41e-08 2.71e-08 1.22e-07 4.35e-07 4.36e-08 2.04e-08 1.26e-07 1.31e-08 1.21e-07 3.01e-08 6.15e-08
ENSG00000142945 KIF2C 114474 6.95e-06 8.57e-06 1.36e-06 4.36e-06 2.5e-06 3.7e-06 9.38e-06 2.18e-06 7.82e-06 4.65e-06 1.04e-05 4.97e-06 1.16e-05 3.8e-06 2.18e-06 6.58e-06 3.74e-06 6.03e-06 2.66e-06 2.84e-06 5.18e-06 8.16e-06 6.78e-06 3.35e-06 1.22e-05 3.77e-06 4.68e-06 3.43e-06 8.33e-06 7.61e-06 4.46e-06 9.92e-07 1.22e-06 3.35e-06 3.88e-06 2.49e-06 1.76e-06 1.91e-06 1.89e-06 1e-06 1.11e-06 9.16e-06 1.27e-06 2.8e-07 8.46e-07 1.77e-06 1.8e-06 7.75e-07 4.59e-07
ENSG00000142959 BEST4 66122 1.09e-05 1.24e-05 2.64e-06 8.31e-06 3.08e-06 6.12e-06 1.73e-05 3.36e-06 1.41e-05 6.93e-06 1.75e-05 6.94e-06 2.26e-05 4.76e-06 4.39e-06 9.06e-06 7.77e-06 1.19e-05 4.31e-06 4.27e-06 7.68e-06 1.32e-05 1.29e-05 5.06e-06 2.32e-05 5.29e-06 7.72e-06 6.29e-06 1.53e-05 1.2e-05 8.75e-06 1.45e-06 1.67e-06 4.84e-06 6.48e-06 3.74e-06 2.36e-06 2.7e-06 2.99e-06 2.23e-06 1.73e-06 1.61e-05 2.43e-06 4.31e-07 1.97e-06 2.61e-06 3.21e-06 1.43e-06 1.32e-06
ENSG00000173846 PLK3 53915 1.29e-05 1.4e-05 3.18e-06 9.91e-06 3.82e-06 7.28e-06 2.11e-05 3.67e-06 1.67e-05 8.58e-06 2.04e-05 8.18e-06 2.76e-05 6.34e-06 5.09e-06 1.03e-05 8.68e-06 1.44e-05 5.66e-06 5.07e-06 8.78e-06 1.66e-05 1.59e-05 6.27e-06 2.73e-05 5.47e-06 8.05e-06 7.78e-06 1.77e-05 1.5e-05 1.09e-05 1.61e-06 2.07e-06 5.98e-06 7.96e-06 4.43e-06 2.82e-06 2.81e-06 3.56e-06 2.79e-06 1.69e-06 1.89e-05 2.64e-06 5.01e-07 2.04e-06 2.96e-06 3.46e-06 1.48e-06 1.53e-06
ENSG00000198520 ARMH1 179579 4.68e-06 4.77e-06 6.36e-07 2.95e-06 1.6e-06 1.72e-06 4.62e-06 1.24e-06 5.09e-06 2.91e-06 5.56e-06 3.37e-06 7.37e-06 2.29e-06 1.11e-06 4.04e-06 1.97e-06 3.83e-06 1.49e-06 1.51e-06 2.77e-06 4.9e-06 4.59e-06 1.84e-06 6.75e-06 2.12e-06 2.23e-06 1.53e-06 4.41e-06 4.19e-06 2.81e-06 5.57e-07 7.36e-07 2.15e-06 1.99e-06 1.13e-06 1.11e-06 4.51e-07 8.53e-07 6.03e-07 8.54e-07 5.7e-06 4.37e-07 1.58e-07 6.96e-07 1.13e-06 1.05e-06 7.08e-07 6.19e-07
ENSG00000222009 BTBD19 45810 1.42e-05 1.62e-05 4.1e-06 1.17e-05 4.49e-06 8.67e-06 2.42e-05 3.96e-06 1.85e-05 9.72e-06 2.33e-05 9.35e-06 3.18e-05 7.62e-06 5.26e-06 1.15e-05 1.02e-05 1.68e-05 6.52e-06 5.57e-06 9.95e-06 1.97e-05 1.81e-05 7.45e-06 3.01e-05 6.09e-06 9.09e-06 8.35e-06 2.05e-05 1.71e-05 1.25e-05 1.62e-06 2.38e-06 6.71e-06 9.01e-06 4.54e-06 3.11e-06 2.99e-06 4e-06 3.15e-06 1.77e-06 2.17e-05 2.67e-06 5.19e-07 2.39e-06 3.29e-06 3.79e-06 1.57e-06 1.54e-06
ENSG00000280670 CCDC163 -645787 9.36e-07 5.18e-07 1.58e-07 3.48e-07 1.12e-07 2.42e-07 5.8e-07 2e-07 6.27e-07 2.88e-07 7.67e-07 4.55e-07 8.37e-07 1.49e-07 3e-07 3.36e-07 4.73e-07 4.24e-07 2.79e-07 1.97e-07 2.61e-07 5.17e-07 3.87e-07 1.91e-07 8.33e-07 2.53e-07 3.93e-07 2.69e-07 4.33e-07 5.17e-07 3.1e-07 5.93e-08 5.31e-08 1.77e-07 3.3e-07 1.55e-07 1.05e-07 1.09e-07 6.41e-08 2.71e-08 1.22e-07 4.35e-07 4.36e-08 2.04e-08 1.26e-07 1.33e-08 1.21e-07 3.01e-08 6.15e-08