Genes within 1Mb (chr1:44833684:T:C):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000117408 IPO13 886734 eQTL 3.57e-02 0.0376 0.0179 0.00169 0.0 0.26
ENSG00000117411 B4GALT2 854741 eQTL 4.68e-02 0.0565 0.0284 0.0 0.0 0.26
ENSG00000126088 UROD -177266 pQTL 3.90e-60 -0.259 0.015 0.0 0.0 0.261
ENSG00000126088 UROD -177266 eQTL 6.28e-26 -0.243 0.0224 0.0 0.0 0.26
ENSG00000132780 NASP -750162 eQTL 3.11e-02 -0.0398 0.0184 0.0 0.0 0.26
ENSG00000132781 MUTYH -506786 eQTL 3.33e-03 0.0442 0.015 0.0 0.0 0.26
ENSG00000142945 KIF2C 93866 eQTL 1.97e-08 -0.107 0.0189 0.0 0.0 0.26
ENSG00000159588 CCDC17 -790373 eQTL 2.13e-02 -0.0374 0.0162 0.0 0.0 0.26
ENSG00000173846 PLK3 33307 eQTL 1.60e-10 -0.0826 0.0128 0.00139 0.00149 0.26
ENSG00000186603 HPDL -493221 eQTL 2.87e-02 0.068 0.0311 0.00123 0.0 0.26
ENSG00000188396 TCTEX1D4 27009 eQTL 2.60e-03 0.0459 0.0152 0.00128 0.0 0.26
ENSG00000198520 ARMH1 158971 eQTL 4.85e-03 -0.0571 0.0202 0.0 0.0 0.26
ENSG00000222009 BTBD19 25202 eQTL 1.92e-08 0.0939 0.0166 0.0 0.0 0.26
ENSG00000230896 AL604028.1 -863391 eQTL 4.79e-02 -0.0856 0.0432 0.0 0.0 0.26


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000070759 \N -657479 3.21e-07 1.56e-07 6.57e-08 2.15e-07 1.07e-07 8.4e-08 2.16e-07 6.12e-08 1.66e-07 1.03e-07 1.66e-07 1.46e-07 2.24e-07 8.07e-08 5.62e-08 9.01e-08 5.27e-08 1.8e-07 7.27e-08 5.61e-08 1.24e-07 1.56e-07 1.58e-07 3.68e-08 2.02e-07 1.39e-07 1.23e-07 1.17e-07 1.32e-07 1.38e-07 1.26e-07 6.87e-08 4.23e-08 9.8e-08 3.71e-08 4.77e-08 4.62e-08 6.66e-08 6.35e-08 6.19e-08 5.44e-08 1.59e-07 3.46e-08 1.08e-08 4.91e-08 6.83e-09 7.26e-08 0.0 4.47e-08
ENSG00000117410 \N 859197 2.76e-07 1.3e-07 5.72e-08 1.86e-07 9.8e-08 9.48e-08 1.53e-07 5.53e-08 1.45e-07 5.67e-08 1.54e-07 1.01e-07 1.47e-07 7.13e-08 5.91e-08 7.49e-08 4.01e-08 1.33e-07 6.32e-08 4.78e-08 1.22e-07 1.24e-07 1.44e-07 2.64e-08 1.46e-07 1.21e-07 1.1e-07 9.74e-08 1.16e-07 1e-07 1.02e-07 4.61e-08 3.73e-08 8.25e-08 7.51e-08 3.22e-08 5.45e-08 8.68e-08 6.63e-08 4.19e-08 4.37e-08 1.36e-07 5.27e-08 1.23e-08 3.2e-08 1.89e-08 1.2e-07 1.92e-09 4.82e-08
ENSG00000126088 UROD -177266 3.39e-06 3.18e-06 4.68e-07 1.86e-06 6.85e-07 8.07e-07 2.08e-06 7.12e-07 2.22e-06 1.21e-06 2.52e-06 1.66e-06 3.71e-06 1.4e-06 9.26e-07 1.7e-06 1.58e-06 2.27e-06 1.49e-06 1.41e-06 1.37e-06 3.02e-06 2.47e-06 1.1e-06 4.03e-06 1.1e-06 1.47e-06 1.81e-06 2.49e-06 2.52e-06 1.99e-06 3.45e-07 5.85e-07 1.22e-06 1.27e-06 9.73e-07 7.48e-07 4.21e-07 1.16e-06 3.76e-07 2.88e-07 3.41e-06 6.22e-07 2.15e-07 2.89e-07 3.48e-07 8.29e-07 1.95e-07 2.05e-07
ENSG00000132768 \N 863684 2.76e-07 1.3e-07 5.72e-08 1.86e-07 9.8e-08 9.48e-08 1.53e-07 5.53e-08 1.45e-07 5.67e-08 1.54e-07 1.01e-07 1.47e-07 7.13e-08 5.91e-08 7.36e-08 4.01e-08 1.33e-07 6.32e-08 4.78e-08 1.22e-07 1.24e-07 1.44e-07 2.64e-08 1.46e-07 1.21e-07 1.1e-07 9.74e-08 1.16e-07 1e-07 9.92e-08 4.23e-08 3.73e-08 8.25e-08 7.51e-08 3.22e-08 5.45e-08 8.68e-08 6.63e-08 4.19e-08 4.39e-08 1.35e-07 5.22e-08 1.23e-08 3.2e-08 1.89e-08 1.2e-07 1.92e-09 4.82e-08
ENSG00000142945 KIF2C 93866 5.86e-06 7.52e-06 6.5e-07 3.37e-06 1.66e-06 2.1e-06 8.08e-06 1.25e-06 4.79e-06 3.34e-06 8.06e-06 3.14e-06 1.02e-05 2.39e-06 9.3e-07 4.08e-06 3.02e-06 3.67e-06 1.81e-06 1.72e-06 2.66e-06 6.58e-06 4.87e-06 1.99e-06 9.17e-06 2.08e-06 2.88e-06 1.78e-06 6.07e-06 6.77e-06 3.36e-06 4.17e-07 8.05e-07 2.07e-06 1.97e-06 1.59e-06 1e-06 5.55e-07 9.08e-07 5.64e-07 5.19e-07 8.42e-06 8.16e-07 1.56e-07 7.66e-07 1.1e-06 1.16e-06 6.71e-07 4.98e-07
ENSG00000142959 \N 45514 1.07e-05 1.26e-05 1.88e-06 6.34e-06 2.3e-06 5.26e-06 1.23e-05 2.15e-06 1.06e-05 5.44e-06 1.41e-05 6.05e-06 1.9e-05 4.17e-06 3.46e-06 6.64e-06 5.78e-06 8.19e-06 3.17e-06 2.82e-06 6.18e-06 1.06e-05 9.75e-06 3.3e-06 1.83e-05 4.43e-06 6.02e-06 4.84e-06 1.24e-05 1.06e-05 7.63e-06 1.05e-06 1.22e-06 3.31e-06 4.88e-06 2.85e-06 1.79e-06 2.02e-06 2.11e-06 9.85e-07 1.01e-06 1.43e-05 1.63e-06 1.35e-07 7.94e-07 1.67e-06 1.75e-06 7.75e-07 4.71e-07
ENSG00000159588 CCDC17 -790373 2.77e-07 1.34e-07 6.26e-08 1.83e-07 9.82e-08 8.33e-08 1.6e-07 5.66e-08 1.45e-07 6.4e-08 1.57e-07 1.11e-07 1.59e-07 7.37e-08 6.25e-08 7.23e-08 4.18e-08 1.44e-07 7.12e-08 5.04e-08 1.25e-07 1.26e-07 1.44e-07 3.17e-08 1.63e-07 1.26e-07 1.18e-07 9.92e-08 1.23e-07 1.03e-07 1.08e-07 4.51e-08 3.68e-08 8.56e-08 5.99e-08 2.85e-08 5.74e-08 8.51e-08 6.71e-08 3.67e-08 5.13e-08 1.4e-07 4.17e-08 7.47e-09 3.32e-08 1.65e-08 9.96e-08 2e-09 4.91e-08
ENSG00000173846 PLK3 33307 1.27e-05 1.48e-05 2.59e-06 7.89e-06 2.42e-06 6.21e-06 1.78e-05 2.13e-06 1.32e-05 6.76e-06 1.78e-05 6.83e-06 2.49e-05 5.28e-06 4.25e-06 8.56e-06 7.72e-06 1.11e-05 3.84e-06 3.36e-06 6.83e-06 1.27e-05 1.25e-05 3.99e-06 2.34e-05 4.65e-06 7.44e-06 5.54e-06 1.48e-05 1.38e-05 9.73e-06 9.89e-07 1.43e-06 3.73e-06 5.84e-06 3.37e-06 1.77e-06 2.35e-06 2.22e-06 1.54e-06 9.41e-07 1.74e-05 2.21e-06 1.9e-07 8.89e-07 2.14e-06 1.98e-06 7.25e-07 4.78e-07
ENSG00000188396 TCTEX1D4 27009 1.41e-05 1.71e-05 2.64e-06 9.13e-06 2.6e-06 6.95e-06 2.08e-05 2.46e-06 1.54e-05 7.59e-06 1.97e-05 7.67e-06 2.87e-05 6.43e-06 4.76e-06 9.16e-06 8.2e-06 1.21e-05 4.42e-06 4.04e-06 7.56e-06 1.42e-05 1.43e-05 4.71e-06 2.59e-05 5.13e-06 7.62e-06 6.54e-06 1.66e-05 1.57e-05 1.11e-05 1.06e-06 1.49e-06 3.93e-06 6.37e-06 3.76e-06 1.81e-06 2.51e-06 2.78e-06 2e-06 1.05e-06 1.96e-05 2.45e-06 2.03e-07 1.15e-06 2.36e-06 2.21e-06 8.41e-07 6.2e-07
ENSG00000222009 BTBD19 25202 1.43e-05 1.8e-05 2.91e-06 9.48e-06 2.69e-06 7.4e-06 2.14e-05 2.46e-06 1.62e-05 8.14e-06 2.04e-05 7.98e-06 2.97e-05 7.1e-06 4.91e-06 9.37e-06 8.44e-06 1.24e-05 4.67e-06 4.17e-06 7.79e-06 1.47e-05 1.54e-05 4.73e-06 2.67e-05 5.11e-06 7.82e-06 6.92e-06 1.69e-05 1.61e-05 1.16e-05 9.64e-07 1.51e-06 4.09e-06 6.62e-06 3.89e-06 1.87e-06 2.61e-06 2.81e-06 2.05e-06 1.1e-06 2.02e-05 2.47e-06 2.03e-07 1.33e-06 2.44e-06 2.46e-06 9.75e-07 6.76e-07
ENSG00000230896 AL604028.1 -863391 2.76e-07 1.3e-07 5.72e-08 1.86e-07 9.8e-08 9.48e-08 1.53e-07 5.53e-08 1.45e-07 5.67e-08 1.54e-07 1.01e-07 1.47e-07 7.13e-08 5.91e-08 7.36e-08 4.01e-08 1.33e-07 6.32e-08 4.78e-08 1.22e-07 1.24e-07 1.44e-07 2.64e-08 1.46e-07 1.21e-07 1.1e-07 9.74e-08 1.16e-07 1e-07 9.92e-08 4.23e-08 3.73e-08 8.25e-08 7.51e-08 3.22e-08 5.45e-08 8.68e-08 6.63e-08 4.19e-08 4.37e-08 1.35e-07 5.22e-08 1.23e-08 3.2e-08 1.89e-08 1.2e-07 1.92e-09 4.82e-08
ENSG00000281912 \N -470226 8.15e-07 4.63e-07 1.29e-07 3.05e-07 1.05e-07 2.01e-07 4.53e-07 1.09e-07 3.32e-07 2.26e-07 4.64e-07 3.5e-07 6e-07 1.1e-07 1.5e-07 1.96e-07 2.77e-07 3.56e-07 2.12e-07 1.32e-07 1.91e-07 3.1e-07 3.02e-07 1.27e-07 5.75e-07 2.46e-07 2.52e-07 2.18e-07 2.78e-07 5.28e-07 2.43e-07 4.75e-08 5.19e-08 1.17e-07 2.32e-07 1.36e-07 1.1e-07 9.46e-08 4.23e-08 5.77e-08 3.68e-08 3.55e-07 4.59e-08 1.93e-08 1.34e-07 1.22e-08 1.1e-07 1.28e-08 5.86e-08