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Genes within 1Mb (chr1:44721877:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000070759 TESK2 -769286 sc-eQTL 9.76e-02 0.344 0.206 0.051 NK_CD56bright L2
ENSG00000070785 EIF2B3 -264845 sc-eQTL 1.73e-01 0.302 0.221 0.051 NK_CD56bright L2
ENSG00000117408 IPO13 774927 sc-eQTL 1.74e-01 -0.295 0.216 0.051 NK_CD56bright L2
ENSG00000117410 ATP6V0B 747390 sc-eQTL 6.98e-01 -0.0843 0.217 0.051 NK_CD56bright L2
ENSG00000117411 B4GALT2 742934 sc-eQTL 1.44e-01 -0.285 0.195 0.051 NK_CD56bright L2
ENSG00000117419 ERI3 366617 sc-eQTL 3.18e-02 0.478 0.221 0.051 NK_CD56bright L2
ENSG00000117448 AKR1A1 -828666 sc-eQTL 6.30e-01 -0.098 0.203 0.051 NK_CD56bright L2
ENSG00000117450 PRDX1 -801170 sc-eQTL 4.30e-01 0.152 0.193 0.051 NK_CD56bright L2
ENSG00000126088 UROD -289073 sc-eQTL 9.16e-01 0.02 0.19 0.051 NK_CD56bright L2
ENSG00000126106 TMEM53 47396 sc-eQTL 8.19e-01 -0.0486 0.213 0.051 NK_CD56bright L2
ENSG00000126107 HECTD3 -289447 sc-eQTL 2.76e-01 0.236 0.216 0.051 NK_CD56bright L2
ENSG00000132768 DPH2 751877 sc-eQTL 5.23e-01 -0.138 0.216 0.051 NK_CD56bright L2
ENSG00000132773 TOE1 -618175 sc-eQTL 9.63e-01 0.00915 0.199 0.051 NK_CD56bright L2
ENSG00000132780 NASP -861969 sc-eQTL 2.20e-01 -0.233 0.189 0.051 NK_CD56bright L2
ENSG00000132781 MUTYH -619016 sc-eQTL 6.54e-01 -0.105 0.234 0.051 NK_CD56bright L2
ENSG00000142937 RPS8 -53374 sc-eQTL 7.02e-01 -0.0396 0.104 0.051 NK_CD56bright L2
ENSG00000159214 CCDC24 730518 sc-eQTL 4.19e-01 -0.173 0.213 0.051 NK_CD56bright L2
ENSG00000159592 GPBP1L1 -966236 sc-eQTL 5.61e-01 0.127 0.219 0.051 NK_CD56bright L2
ENSG00000159596 TMEM69 -966304 sc-eQTL 8.99e-02 -0.35 0.205 0.051 NK_CD56bright L2
ENSG00000162415 ZSWIM5 -584332 sc-eQTL 9.13e-01 -0.0206 0.189 0.051 NK_CD56bright L2
ENSG00000173846 PLK3 -78500 sc-eQTL 8.56e-01 0.0353 0.195 0.051 NK_CD56bright L2
ENSG00000178028 DMAP1 508422 sc-eQTL 7.14e-01 0.0851 0.231 0.051 NK_CD56bright L2
ENSG00000187147 RNF220 316683 sc-eQTL 2.13e-01 -0.239 0.191 0.051 NK_CD56bright L2
ENSG00000070759 TESK2 -769286 sc-eQTL 4.77e-01 0.151 0.211 0.063 PB L2
ENSG00000070785 EIF2B3 -264845 sc-eQTL 7.15e-01 -0.0659 0.18 0.063 PB L2
ENSG00000117408 IPO13 774927 sc-eQTL 9.92e-01 0.0024 0.229 0.063 PB L2
ENSG00000117410 ATP6V0B 747390 sc-eQTL 5.53e-01 0.0608 0.102 0.063 PB L2
ENSG00000117411 B4GALT2 742934 sc-eQTL 6.79e-01 -0.0647 0.156 0.063 PB L2
ENSG00000117419 ERI3 366617 sc-eQTL 9.90e-01 0.00268 0.219 0.063 PB L2
ENSG00000117425 PTCH2 -121376 sc-eQTL 7.43e-01 -0.0681 0.207 0.063 PB L2
ENSG00000117448 AKR1A1 -828666 sc-eQTL 9.80e-01 0.00288 0.117 0.063 PB L2
ENSG00000117450 PRDX1 -801170 sc-eQTL 6.71e-01 0.0449 0.105 0.063 PB L2
ENSG00000126088 UROD -289073 sc-eQTL 6.97e-01 -0.0617 0.158 0.063 PB L2
ENSG00000126106 TMEM53 47396 sc-eQTL 3.74e-01 -0.187 0.21 0.063 PB L2
ENSG00000126107 HECTD3 -289447 sc-eQTL 2.52e-01 0.2 0.173 0.063 PB L2
ENSG00000132768 DPH2 751877 sc-eQTL 2.46e-01 -0.264 0.226 0.063 PB L2
ENSG00000132773 TOE1 -618175 sc-eQTL 7.16e-01 0.0819 0.224 0.063 PB L2
ENSG00000132780 NASP -861969 sc-eQTL 5.97e-01 -0.124 0.234 0.063 PB L2
ENSG00000132781 MUTYH -619016 sc-eQTL 9.17e-01 0.0258 0.245 0.063 PB L2
ENSG00000142937 RPS8 -53374 sc-eQTL 8.51e-01 0.0221 0.117 0.063 PB L2
ENSG00000159214 CCDC24 730518 sc-eQTL 7.32e-01 -0.0765 0.223 0.063 PB L2
ENSG00000159592 GPBP1L1 -966236 sc-eQTL 2.67e-01 0.269 0.241 0.063 PB L2
ENSG00000159596 TMEM69 -966304 sc-eQTL 5.38e-01 0.125 0.202 0.063 PB L2
ENSG00000173846 PLK3 -78500 sc-eQTL 6.71e-01 -0.092 0.216 0.063 PB L2
ENSG00000178028 DMAP1 508422 sc-eQTL 7.22e-01 0.0894 0.25 0.063 PB L2
ENSG00000187147 RNF220 316683 sc-eQTL 3.84e-01 0.181 0.207 0.063 PB L2
ENSG00000198520 ARMH1 47185 sc-eQTL 4.66e-01 0.138 0.189 0.063 PB L2
ENSG00000280670 CCDC163 -778202 sc-eQTL 6.66e-01 -0.0784 0.181 0.063 PB L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000117407 ARTN 788557 eQTL 0.0189 0.221 0.0938 0.0 0.0 0.0461
ENSG00000117411 B4GALT2 742934 eQTL 0.0455 0.119 0.0596 0.00104 0.0 0.0461
ENSG00000126088 UROD -289073 eQTL 0.0242 0.113 0.0499 0.0 0.0 0.0461
ENSG00000188396 TCTEX1D4 -84798 eQTL 8.41e-05 -0.126 0.0318 0.00876 0.00479 0.0461
ENSG00000198520 ARMH1 47164 eQTL 8.77e-05 0.167 0.0423 0.0107 0.008 0.0461
ENSG00000222009 BTBD19 -86605 eQTL 3.31e-08 -0.194 0.0348 0.0 0.0 0.0461
ENSG00000281912 LINC01144 -582033 eQTL 0.0306 0.175 0.0807 0.0 0.0 0.0461

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina