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Genes within 1Mb (chr1:44709398:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000070759 TESK2 -781765 sc-eQTL 8.04e-01 -0.0476 0.192 0.95 CD4_CTL L2
ENSG00000070785 EIF2B3 -277324 sc-eQTL 4.97e-01 0.144 0.211 0.95 CD4_CTL L2
ENSG00000117408 IPO13 762448 sc-eQTL 7.00e-01 -0.0754 0.196 0.95 CD4_CTL L2
ENSG00000117410 ATP6V0B 734911 sc-eQTL 5.76e-01 0.111 0.199 0.95 CD4_CTL L2
ENSG00000117419 ERI3 354138 sc-eQTL 3.96e-01 -0.18 0.211 0.95 CD4_CTL L2
ENSG00000117448 AKR1A1 -841145 sc-eQTL 5.68e-01 0.124 0.217 0.95 CD4_CTL L2
ENSG00000117450 PRDX1 -813649 sc-eQTL 9.12e-01 -0.0176 0.159 0.95 CD4_CTL L2
ENSG00000126088 UROD -301552 sc-eQTL 4.57e-01 0.157 0.21 0.95 CD4_CTL L2
ENSG00000126107 HECTD3 -301926 sc-eQTL 7.88e-01 -0.0545 0.203 0.95 CD4_CTL L2
ENSG00000132768 DPH2 739398 sc-eQTL 8.29e-01 0.0447 0.206 0.95 CD4_CTL L2
ENSG00000132773 TOE1 -630654 sc-eQTL 4.02e-01 -0.169 0.201 0.95 CD4_CTL L2
ENSG00000132780 NASP -874448 sc-eQTL 3.81e-01 -0.167 0.19 0.95 CD4_CTL L2
ENSG00000132781 MUTYH -631495 sc-eQTL 4.57e-01 0.154 0.206 0.95 CD4_CTL L2
ENSG00000142937 RPS8 -65853 sc-eQTL 8.34e-01 -0.0181 0.0862 0.95 CD4_CTL L2
ENSG00000159592 GPBP1L1 -978715 sc-eQTL 3.39e-01 -0.192 0.2 0.95 CD4_CTL L2
ENSG00000159596 TMEM69 -978783 sc-eQTL 3.68e-01 0.178 0.198 0.95 CD4_CTL L2
ENSG00000162415 ZSWIM5 -596811 sc-eQTL 6.87e-01 -0.0737 0.182 0.95 CD4_CTL L2
ENSG00000173846 PLK3 -90979 sc-eQTL 7.83e-01 -0.042 0.152 0.95 CD4_CTL L2
ENSG00000178028 DMAP1 495943 sc-eQTL 9.90e-01 0.00265 0.216 0.95 CD4_CTL L2
ENSG00000187147 RNF220 304204 sc-eQTL 3.45e-01 -0.162 0.171 0.95 CD4_CTL L2
ENSG00000198520 ARMH1 34706 sc-eQTL 5.30e-01 -0.0982 0.156 0.95 CD4_CTL L2
ENSG00000070759 TESK2 -781765 sc-eQTL 4.82e-01 -0.14 0.2 0.95 NK_HLA L2
ENSG00000070785 EIF2B3 -277324 sc-eQTL 2.80e-01 0.222 0.205 0.95 NK_HLA L2
ENSG00000117408 IPO13 762448 sc-eQTL 5.35e-01 0.12 0.193 0.95 NK_HLA L2
ENSG00000117410 ATP6V0B 734911 sc-eQTL 3.39e-02 -0.421 0.197 0.95 NK_HLA L2
ENSG00000117411 B4GALT2 730455 sc-eQTL 5.89e-01 0.101 0.186 0.95 NK_HLA L2
ENSG00000117419 ERI3 354138 sc-eQTL 5.76e-03 -0.569 0.204 0.95 NK_HLA L2
ENSG00000117448 AKR1A1 -841145 sc-eQTL 8.73e-01 0.033 0.207 0.95 NK_HLA L2
ENSG00000117450 PRDX1 -813649 sc-eQTL 5.77e-01 -0.0987 0.177 0.95 NK_HLA L2
ENSG00000126088 UROD -301552 sc-eQTL 9.35e-01 -0.0171 0.208 0.95 NK_HLA L2
ENSG00000126106 TMEM53 34917 sc-eQTL 9.62e-01 0.00945 0.197 0.95 NK_HLA L2
ENSG00000126107 HECTD3 -301926 sc-eQTL 1.35e-01 -0.328 0.218 0.95 NK_HLA L2
ENSG00000132768 DPH2 739398 sc-eQTL 8.96e-01 -0.0276 0.212 0.95 NK_HLA L2
ENSG00000132773 TOE1 -630654 sc-eQTL 9.93e-01 0.00166 0.203 0.95 NK_HLA L2
ENSG00000132780 NASP -874448 sc-eQTL 9.13e-01 0.0224 0.204 0.95 NK_HLA L2
ENSG00000132781 MUTYH -631495 sc-eQTL 5.58e-01 0.124 0.212 0.95 NK_HLA L2
ENSG00000142937 RPS8 -65853 sc-eQTL 3.91e-01 0.0771 0.0896 0.95 NK_HLA L2
ENSG00000159214 CCDC24 718039 sc-eQTL 4.33e-01 0.149 0.19 0.95 NK_HLA L2
ENSG00000159592 GPBP1L1 -978715 sc-eQTL 6.82e-02 0.335 0.183 0.95 NK_HLA L2
ENSG00000159596 TMEM69 -978783 sc-eQTL 8.35e-01 -0.0418 0.201 0.95 NK_HLA L2
ENSG00000162415 ZSWIM5 -596811 sc-eQTL 7.31e-01 -0.063 0.183 0.95 NK_HLA L2
ENSG00000173846 PLK3 -90979 sc-eQTL 5.37e-01 -0.115 0.186 0.95 NK_HLA L2
ENSG00000178028 DMAP1 495943 sc-eQTL 2.90e-01 0.221 0.209 0.95 NK_HLA L2
ENSG00000187147 RNF220 304204 sc-eQTL 4.31e-01 -0.141 0.179 0.95 NK_HLA L2
ENSG00000070759 TESK2 -781765 sc-eQTL 9.97e-01 0.000734 0.185 0.949 cDC L2
ENSG00000070785 EIF2B3 -277324 sc-eQTL 8.39e-01 -0.0363 0.179 0.949 cDC L2
ENSG00000117408 IPO13 762448 sc-eQTL 2.66e-01 -0.203 0.182 0.949 cDC L2
ENSG00000117410 ATP6V0B 734911 sc-eQTL 7.72e-02 0.21 0.118 0.949 cDC L2
ENSG00000117419 ERI3 354138 sc-eQTL 7.98e-01 -0.0498 0.194 0.949 cDC L2
ENSG00000117425 PTCH2 -133855 sc-eQTL 8.75e-01 0.0251 0.16 0.949 cDC L2
ENSG00000117448 AKR1A1 -841145 sc-eQTL 9.54e-01 0.0102 0.178 0.949 cDC L2
ENSG00000117450 PRDX1 -813649 sc-eQTL 2.69e-02 0.291 0.131 0.949 cDC L2
ENSG00000126088 UROD -301552 sc-eQTL 9.12e-01 0.0201 0.182 0.949 cDC L2
ENSG00000126106 TMEM53 34917 sc-eQTL 5.34e-02 -0.336 0.173 0.949 cDC L2
ENSG00000126107 HECTD3 -301926 sc-eQTL 9.62e-01 -0.00978 0.206 0.949 cDC L2
ENSG00000132768 DPH2 739398 sc-eQTL 5.50e-01 0.115 0.192 0.949 cDC L2
ENSG00000132773 TOE1 -630654 sc-eQTL 7.93e-01 0.0532 0.202 0.949 cDC L2
ENSG00000132780 NASP -874448 sc-eQTL 2.89e-01 0.195 0.183 0.949 cDC L2
ENSG00000132781 MUTYH -631495 sc-eQTL 6.83e-01 -0.0772 0.188 0.949 cDC L2
ENSG00000142937 RPS8 -65853 sc-eQTL 3.29e-01 0.085 0.0868 0.949 cDC L2
ENSG00000159214 CCDC24 718039 sc-eQTL 5.35e-01 0.104 0.167 0.949 cDC L2
ENSG00000159592 GPBP1L1 -978715 sc-eQTL 5.07e-01 -0.125 0.189 0.949 cDC L2
ENSG00000159596 TMEM69 -978783 sc-eQTL 6.12e-02 -0.355 0.189 0.949 cDC L2
ENSG00000173846 PLK3 -90979 sc-eQTL 4.47e-01 0.0968 0.127 0.949 cDC L2
ENSG00000178028 DMAP1 495943 sc-eQTL 8.23e-01 0.043 0.193 0.949 cDC L2
ENSG00000187147 RNF220 304204 sc-eQTL 6.72e-01 0.0714 0.168 0.949 cDC L2
ENSG00000198520 ARMH1 34706 sc-eQTL 3.36e-01 0.19 0.197 0.949 cDC L2
ENSG00000222009 BTBD19 -99084 sc-eQTL 8.91e-01 -0.0242 0.177 0.949 cDC L2
ENSG00000070759 TESK2 -781765 sc-eQTL 3.19e-01 -0.218 0.218 0.948 gdT L2
ENSG00000070785 EIF2B3 -277324 sc-eQTL 7.49e-01 0.0731 0.228 0.948 gdT L2
ENSG00000117408 IPO13 762448 sc-eQTL 2.91e-01 -0.238 0.224 0.948 gdT L2
ENSG00000117410 ATP6V0B 734911 sc-eQTL 2.61e-01 -0.23 0.204 0.948 gdT L2
ENSG00000117411 B4GALT2 730455 sc-eQTL 3.93e-01 0.181 0.211 0.948 gdT L2
ENSG00000117419 ERI3 354138 sc-eQTL 7.34e-01 -0.0842 0.248 0.948 gdT L2
ENSG00000117448 AKR1A1 -841145 sc-eQTL 4.76e-01 -0.156 0.219 0.948 gdT L2
ENSG00000117450 PRDX1 -813649 sc-eQTL 9.32e-01 -0.0174 0.205 0.948 gdT L2
ENSG00000126088 UROD -301552 sc-eQTL 3.28e-01 0.205 0.209 0.948 gdT L2
ENSG00000126106 TMEM53 34917 sc-eQTL 3.26e-01 0.209 0.212 0.948 gdT L2
ENSG00000126107 HECTD3 -301926 sc-eQTL 4.47e-01 0.184 0.242 0.948 gdT L2
ENSG00000132768 DPH2 739398 sc-eQTL 5.93e-01 -0.12 0.224 0.948 gdT L2
ENSG00000132773 TOE1 -630654 sc-eQTL 2.27e-01 0.258 0.213 0.948 gdT L2
ENSG00000132780 NASP -874448 sc-eQTL 3.56e-01 -0.2 0.217 0.948 gdT L2
ENSG00000132781 MUTYH -631495 sc-eQTL 9.23e-01 -0.0221 0.227 0.948 gdT L2
ENSG00000142937 RPS8 -65853 sc-eQTL 2.88e-01 0.0953 0.0893 0.948 gdT L2
ENSG00000142945 KIF2C -30420 sc-eQTL 6.26e-01 0.0647 0.132 0.948 gdT L2
ENSG00000159592 GPBP1L1 -978715 sc-eQTL 3.01e-01 0.247 0.238 0.948 gdT L2
ENSG00000159596 TMEM69 -978783 sc-eQTL 5.98e-01 0.112 0.212 0.948 gdT L2
ENSG00000162415 ZSWIM5 -596811 sc-eQTL 8.87e-01 0.0298 0.209 0.948 gdT L2
ENSG00000173846 PLK3 -90979 sc-eQTL 3.31e-01 0.148 0.151 0.948 gdT L2
ENSG00000178028 DMAP1 495943 sc-eQTL 6.70e-01 -0.0969 0.227 0.948 gdT L2
ENSG00000186603 HPDL -617497 sc-eQTL 5.80e-01 0.101 0.182 0.948 gdT L2
ENSG00000187147 RNF220 304204 sc-eQTL 4.84e-01 -0.132 0.188 0.948 gdT L2
ENSG00000198520 ARMH1 34706 sc-eQTL 8.06e-01 0.0506 0.205 0.948 gdT L2
ENSG00000280670 CCDC163 -790681 sc-eQTL 5.88e-01 0.114 0.211 0.948 gdT L2
ENSG00000070759 TESK2 -781765 sc-eQTL 7.62e-01 0.063 0.208 0.949 pDC L2
ENSG00000070785 EIF2B3 -277324 sc-eQTL 8.32e-01 -0.0456 0.214 0.949 pDC L2
ENSG00000117408 IPO13 762448 sc-eQTL 9.76e-01 -0.00649 0.211 0.949 pDC L2
ENSG00000117410 ATP6V0B 734911 sc-eQTL 5.46e-01 -0.0881 0.146 0.949 pDC L2
ENSG00000117419 ERI3 354138 sc-eQTL 4.27e-01 -0.162 0.204 0.949 pDC L2
ENSG00000117425 PTCH2 -133855 sc-eQTL 7.63e-01 -0.0505 0.167 0.949 pDC L2
ENSG00000117448 AKR1A1 -841145 sc-eQTL 5.53e-01 -0.108 0.181 0.949 pDC L2
ENSG00000117450 PRDX1 -813649 sc-eQTL 4.47e-01 0.124 0.163 0.949 pDC L2
ENSG00000126088 UROD -301552 sc-eQTL 1.01e-01 -0.33 0.2 0.949 pDC L2
ENSG00000126106 TMEM53 34917 sc-eQTL 5.31e-01 -0.111 0.176 0.949 pDC L2
ENSG00000126107 HECTD3 -301926 sc-eQTL 5.70e-01 -0.12 0.21 0.949 pDC L2
ENSG00000132768 DPH2 739398 sc-eQTL 9.25e-01 -0.0189 0.202 0.949 pDC L2
ENSG00000132773 TOE1 -630654 sc-eQTL 5.06e-01 0.142 0.213 0.949 pDC L2
ENSG00000132780 NASP -874448 sc-eQTL 6.73e-01 0.0723 0.171 0.949 pDC L2
ENSG00000132781 MUTYH -631495 sc-eQTL 3.01e-01 -0.192 0.185 0.949 pDC L2
ENSG00000142937 RPS8 -65853 sc-eQTL 3.06e-01 0.123 0.12 0.949 pDC L2
ENSG00000159214 CCDC24 718039 sc-eQTL 8.77e-01 -0.0278 0.18 0.949 pDC L2
ENSG00000159592 GPBP1L1 -978715 sc-eQTL 3.82e-01 -0.179 0.204 0.949 pDC L2
ENSG00000159596 TMEM69 -978783 sc-eQTL 4.52e-01 -0.145 0.192 0.949 pDC L2
ENSG00000173846 PLK3 -90979 sc-eQTL 5.60e-01 0.0947 0.162 0.949 pDC L2
ENSG00000178028 DMAP1 495943 sc-eQTL 6.13e-01 0.104 0.206 0.949 pDC L2
ENSG00000187147 RNF220 304204 sc-eQTL 9.26e-01 0.0182 0.194 0.949 pDC L2
ENSG00000198520 ARMH1 34706 sc-eQTL 3.18e-01 0.187 0.187 0.949 pDC L2
ENSG00000222009 BTBD19 -99084 sc-eQTL 9.67e-02 -0.341 0.204 0.949 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000117410 ATP6V0B 734911 eQTL 0.029 0.0507 0.0232 0.0 0.0 0.0447
ENSG00000132780 NASP -874448 eQTL 0.0359 -0.0854 0.0406 0.0 0.0 0.0447
ENSG00000142959 BEST4 -78772 eQTL 0.00861 0.185 0.0701 0.0 0.0 0.0447
ENSG00000186603 HPDL -617507 eQTL 2.10e-02 -0.158 0.0685 0.00192 0.0 0.0447

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000142959 BEST4 -78772 7.79e-06 4.91e-06 7.57e-07 2.64e-06 8.14e-07 1.56e-06 4.27e-06 9.86e-07 3.47e-06 2.3e-06 4.71e-06 2.65e-06 7.03e-06 2.49e-06 1.45e-06 3.36e-06 1.63e-06 3.57e-06 1.49e-06 9.54e-07 2.41e-06 4.42e-06 3.64e-06 1.81e-06 5.12e-06 1.32e-06 2.57e-06 1.57e-06 4.42e-06 3.81e-06 2.23e-06 3.41e-07 6.26e-07 1.87e-06 1.93e-06 9.23e-07 8.89e-07 3.86e-07 1.34e-06 4.17e-07 2.44e-07 5.71e-06 5.08e-07 6.48e-08 3.75e-07 3.05e-07 8.74e-07 2.4e-07 3.24e-07
ENSG00000159596 \N -978783 2.95e-07 1.19e-07 4.08e-08 1.86e-07 9.01e-08 9.9e-08 1.49e-07 5.19e-08 1.44e-07 4.94e-08 1.6e-07 8.36e-08 1.41e-07 6.76e-08 5.91e-08 7.3e-08 3.88e-08 1.21e-07 5.39e-08 4.1e-08 1.04e-07 1.28e-07 1.39e-07 3.79e-08 1.4e-07 1.16e-07 1.07e-07 9.65e-08 1.09e-07 1.12e-07 9.64e-08 4.09e-08 3.56e-08 8.55e-08 7.66e-08 3.49e-08 5.05e-08 9.49e-08 6.56e-08 3.77e-08 5.34e-08 1.4e-07 5.2e-08 2.33e-08 3.83e-08 1.86e-08 1.19e-07 3.78e-09 4.88e-08
ENSG00000188396 \N -97277 5.77e-06 3.77e-06 4.85e-07 1.8e-06 4.91e-07 1.55e-06 2.77e-06 6.98e-07 2.35e-06 1.6e-06 3.39e-06 1.68e-06 6.44e-06 1.52e-06 1.14e-06 2.3e-06 1.36e-06 2.37e-06 1.17e-06 1.4e-06 1.43e-06 3.45e-06 3.38e-06 1.42e-06 4.54e-06 1.19e-06 1.8e-06 1.69e-06 3.85e-06 2.65e-06 1.99e-06 2.74e-07 5.19e-07 1.49e-06 1.72e-06 9.73e-07 8.45e-07 3.46e-07 1.2e-06 4.17e-07 3.45e-07 4.93e-06 3.82e-07 4.11e-08 3.65e-07 3.58e-07 7.4e-07 1.95e-07 1.92e-07
ENSG00000225447 \N -936799 3.07e-07 1.25e-07 4.47e-08 1.81e-07 9.01e-08 9.48e-08 1.53e-07 5.19e-08 1.44e-07 5.42e-08 1.62e-07 8.59e-08 1.41e-07 6.76e-08 6.12e-08 7.53e-08 3.9e-08 1.26e-07 5.82e-08 4.16e-08 1.08e-07 1.27e-07 1.44e-07 3.68e-08 1.46e-07 1.14e-07 1.07e-07 9.61e-08 1.12e-07 1.1e-07 9.7e-08 3.87e-08 3.61e-08 8.34e-08 7.36e-08 3.2e-08 5.11e-08 9.6e-08 6.54e-08 4.02e-08 4.92e-08 1.46e-07 5.21e-08 2.03e-08 3.4e-08 1.87e-08 1.19e-07 1.88e-09 5.04e-08
ENSG00000230615 \N 678955 6.33e-07 1.53e-07 5.91e-08 2.24e-07 9.8e-08 1.03e-07 2.16e-07 5.66e-08 1.44e-07 1.03e-07 1.63e-07 1.2e-07 2.13e-07 8.15e-08 6.12e-08 8.71e-08 4.12e-08 1.72e-07 7.09e-08 5.48e-08 1.22e-07 1.65e-07 1.64e-07 3.22e-08 2.09e-07 1.26e-07 1.29e-07 1.12e-07 1.32e-07 1.03e-07 1.14e-07 3.99e-08 3.38e-08 9.8e-08 4.41e-08 3.18e-08 5.35e-08 9.3e-08 6.3e-08 4.41e-08 5.1e-08 1.79e-07 3.13e-08 1.86e-08 4e-08 6.98e-09 9.29e-08 2.1e-09 4.72e-08
ENSG00000281912 \N -594512 8.35e-07 1.76e-07 6.45e-08 2.49e-07 9.94e-08 1.44e-07 2.86e-07 5.68e-08 1.86e-07 1.21e-07 1.96e-07 1.46e-07 2.94e-07 8.42e-08 7.98e-08 1.06e-07 4.18e-08 2.15e-07 7.42e-08 6.73e-08 1.23e-07 1.98e-07 1.86e-07 3.68e-08 2.74e-07 1.43e-07 1.39e-07 1.47e-07 1.44e-07 1.24e-07 1.27e-07 4.4e-08 3.8e-08 1.02e-07 7.44e-08 4.77e-08 4.07e-08 8.72e-08 6.33e-08 6.19e-08 4.68e-08 2.72e-07 3.14e-08 7.78e-09 7.26e-08 8.42e-09 7.97e-08 0.0 4.68e-08