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Genes within 1Mb (chr1:44665991:A:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000070759 TESK2 -825172 sc-eQTL 8.92e-01 0.0288 0.211 0.051 CD8_TCM L2
ENSG00000070785 EIF2B3 -320731 sc-eQTL 5.03e-01 -0.145 0.216 0.051 CD8_TCM L2
ENSG00000117408 IPO13 719041 sc-eQTL 1.98e-01 -0.261 0.202 0.051 CD8_TCM L2
ENSG00000117410 ATP6V0B 691504 sc-eQTL 7.67e-01 -0.0528 0.178 0.051 CD8_TCM L2
ENSG00000117419 ERI3 310731 sc-eQTL 8.97e-01 -0.0286 0.221 0.051 CD8_TCM L2
ENSG00000117448 AKR1A1 -884552 sc-eQTL 6.15e-01 -0.103 0.205 0.051 CD8_TCM L2
ENSG00000117450 PRDX1 -857056 sc-eQTL 9.15e-01 -0.0165 0.154 0.051 CD8_TCM L2
ENSG00000126088 UROD -344959 sc-eQTL 8.40e-01 0.0424 0.21 0.051 CD8_TCM L2
ENSG00000126091 ST3GAL3 960167 sc-eQTL 3.28e-01 0.211 0.215 0.051 CD8_TCM L2
ENSG00000126107 HECTD3 -345333 sc-eQTL 9.06e-01 -0.0263 0.222 0.051 CD8_TCM L2
ENSG00000132768 DPH2 695991 sc-eQTL 7.05e-01 -0.0809 0.213 0.051 CD8_TCM L2
ENSG00000132773 TOE1 -674061 sc-eQTL 1.97e-02 0.457 0.194 0.051 CD8_TCM L2
ENSG00000132780 NASP -917855 sc-eQTL 4.21e-01 0.137 0.17 0.051 CD8_TCM L2
ENSG00000132781 MUTYH -674902 sc-eQTL 5.23e-01 -0.145 0.226 0.051 CD8_TCM L2
ENSG00000142937 RPS8 -109260 sc-eQTL 7.38e-01 0.0373 0.111 0.051 CD8_TCM L2
ENSG00000162415 ZSWIM5 -640218 sc-eQTL 1.56e-02 0.469 0.192 0.051 CD8_TCM L2
ENSG00000173846 PLK3 -134386 sc-eQTL 7.11e-01 -0.0547 0.148 0.051 CD8_TCM L2
ENSG00000178028 DMAP1 452536 sc-eQTL 5.84e-01 -0.121 0.221 0.051 CD8_TCM L2
ENSG00000187147 RNF220 260797 sc-eQTL 9.12e-01 0.0205 0.185 0.051 CD8_TCM L2
ENSG00000198520 ARMH1 -8701 sc-eQTL 9.05e-02 0.3 0.176 0.051 CD8_TCM L2
ENSG00000070759 TESK2 -825172 sc-eQTL 3.52e-01 -0.194 0.208 0.053 CD8_TEM L2
ENSG00000070785 EIF2B3 -320731 sc-eQTL 2.73e-01 0.226 0.205 0.053 CD8_TEM L2
ENSG00000117408 IPO13 719041 sc-eQTL 1.01e-01 0.332 0.202 0.053 CD8_TEM L2
ENSG00000117410 ATP6V0B 691504 sc-eQTL 6.30e-01 0.0947 0.196 0.053 CD8_TEM L2
ENSG00000117419 ERI3 310731 sc-eQTL 9.82e-01 0.00534 0.231 0.053 CD8_TEM L2
ENSG00000117448 AKR1A1 -884552 sc-eQTL 5.52e-01 0.124 0.209 0.053 CD8_TEM L2
ENSG00000117450 PRDX1 -857056 sc-eQTL 5.96e-01 -0.098 0.184 0.053 CD8_TEM L2
ENSG00000126088 UROD -344959 sc-eQTL 8.81e-01 0.0305 0.204 0.053 CD8_TEM L2
ENSG00000126091 ST3GAL3 960167 sc-eQTL 5.02e-01 0.137 0.204 0.053 CD8_TEM L2
ENSG00000126107 HECTD3 -345333 sc-eQTL 1.34e-01 -0.315 0.21 0.053 CD8_TEM L2
ENSG00000132768 DPH2 695991 sc-eQTL 8.18e-01 -0.0481 0.208 0.053 CD8_TEM L2
ENSG00000132773 TOE1 -674061 sc-eQTL 7.16e-01 0.0752 0.206 0.053 CD8_TEM L2
ENSG00000132780 NASP -917855 sc-eQTL 3.36e-01 0.148 0.154 0.053 CD8_TEM L2
ENSG00000132781 MUTYH -674902 sc-eQTL 8.14e-02 -0.371 0.212 0.053 CD8_TEM L2
ENSG00000142937 RPS8 -109260 sc-eQTL 6.77e-01 0.051 0.122 0.053 CD8_TEM L2
ENSG00000162415 ZSWIM5 -640218 sc-eQTL 2.94e-01 0.222 0.211 0.053 CD8_TEM L2
ENSG00000173846 PLK3 -134386 sc-eQTL 1.62e-01 -0.201 0.143 0.053 CD8_TEM L2
ENSG00000178028 DMAP1 452536 sc-eQTL 9.02e-01 -0.0274 0.222 0.053 CD8_TEM L2
ENSG00000187147 RNF220 260797 sc-eQTL 8.08e-01 -0.0494 0.203 0.053 CD8_TEM L2
ENSG00000198520 ARMH1 -8701 sc-eQTL 8.31e-01 0.0414 0.194 0.053 CD8_TEM L2
ENSG00000070759 TESK2 -825172 sc-eQTL 3.23e-01 -0.196 0.198 0.051 NK_CD56bright L2
ENSG00000070785 EIF2B3 -320731 sc-eQTL 5.11e-01 0.14 0.212 0.051 NK_CD56bright L2
ENSG00000117408 IPO13 719041 sc-eQTL 8.39e-01 0.0422 0.208 0.051 NK_CD56bright L2
ENSG00000117410 ATP6V0B 691504 sc-eQTL 1.24e-01 0.318 0.206 0.051 NK_CD56bright L2
ENSG00000117411 B4GALT2 687048 sc-eQTL 1.17e-02 -0.469 0.184 0.051 NK_CD56bright L2
ENSG00000117419 ERI3 310731 sc-eQTL 7.30e-01 -0.074 0.214 0.051 NK_CD56bright L2
ENSG00000117448 AKR1A1 -884552 sc-eQTL 3.66e-01 -0.175 0.194 0.051 NK_CD56bright L2
ENSG00000117450 PRDX1 -857056 sc-eQTL 2.15e-01 -0.229 0.184 0.051 NK_CD56bright L2
ENSG00000126088 UROD -344959 sc-eQTL 8.35e-01 0.0379 0.182 0.051 NK_CD56bright L2
ENSG00000126091 ST3GAL3 960167 sc-eQTL 7.62e-01 -0.0643 0.212 0.051 NK_CD56bright L2
ENSG00000126106 TMEM53 -8490 sc-eQTL 6.20e-01 -0.101 0.203 0.051 NK_CD56bright L2
ENSG00000126107 HECTD3 -345333 sc-eQTL 2.71e-01 -0.228 0.206 0.051 NK_CD56bright L2
ENSG00000132768 DPH2 695991 sc-eQTL 3.86e-01 0.179 0.206 0.051 NK_CD56bright L2
ENSG00000132773 TOE1 -674061 sc-eQTL 7.94e-01 -0.0498 0.191 0.051 NK_CD56bright L2
ENSG00000132780 NASP -917855 sc-eQTL 4.36e-01 0.142 0.182 0.051 NK_CD56bright L2
ENSG00000132781 MUTYH -674902 sc-eQTL 1.10e-01 0.358 0.223 0.051 NK_CD56bright L2
ENSG00000142937 RPS8 -109260 sc-eQTL 3.85e-01 0.0862 0.0989 0.051 NK_CD56bright L2
ENSG00000159214 CCDC24 674632 sc-eQTL 1.46e-01 0.296 0.203 0.051 NK_CD56bright L2
ENSG00000162415 ZSWIM5 -640218 sc-eQTL 8.29e-01 0.0391 0.181 0.051 NK_CD56bright L2
ENSG00000173846 PLK3 -134386 sc-eQTL 5.17e-01 0.121 0.186 0.051 NK_CD56bright L2
ENSG00000178028 DMAP1 452536 sc-eQTL 6.20e-01 -0.11 0.221 0.051 NK_CD56bright L2
ENSG00000187147 RNF220 260797 sc-eQTL 4.55e-01 -0.137 0.184 0.051 NK_CD56bright L2
ENSG00000070759 TESK2 -825172 sc-eQTL 8.17e-01 0.0471 0.204 0.053 NK_HLA L2
ENSG00000070785 EIF2B3 -320731 sc-eQTL 5.68e-01 0.12 0.209 0.053 NK_HLA L2
ENSG00000117408 IPO13 719041 sc-eQTL 9.45e-01 -0.0136 0.197 0.053 NK_HLA L2
ENSG00000117410 ATP6V0B 691504 sc-eQTL 2.14e-01 -0.252 0.202 0.053 NK_HLA L2
ENSG00000117411 B4GALT2 687048 sc-eQTL 5.32e-01 -0.119 0.189 0.053 NK_HLA L2
ENSG00000117419 ERI3 310731 sc-eQTL 8.83e-01 0.0312 0.212 0.053 NK_HLA L2
ENSG00000117448 AKR1A1 -884552 sc-eQTL 1.34e-01 0.315 0.209 0.053 NK_HLA L2
ENSG00000117450 PRDX1 -857056 sc-eQTL 4.63e-02 0.358 0.178 0.053 NK_HLA L2
ENSG00000126088 UROD -344959 sc-eQTL 1.97e-01 -0.272 0.211 0.053 NK_HLA L2
ENSG00000126091 ST3GAL3 960167 sc-eQTL 9.36e-01 0.0168 0.21 0.053 NK_HLA L2
ENSG00000126106 TMEM53 -8490 sc-eQTL 4.84e-01 -0.141 0.2 0.053 NK_HLA L2
ENSG00000126107 HECTD3 -345333 sc-eQTL 6.66e-01 0.0965 0.224 0.053 NK_HLA L2
ENSG00000132768 DPH2 695991 sc-eQTL 4.11e-01 -0.178 0.216 0.053 NK_HLA L2
ENSG00000132773 TOE1 -674061 sc-eQTL 7.00e-01 -0.0798 0.207 0.053 NK_HLA L2
ENSG00000132780 NASP -917855 sc-eQTL 6.41e-01 0.0971 0.208 0.053 NK_HLA L2
ENSG00000132781 MUTYH -674902 sc-eQTL 6.19e-01 0.108 0.216 0.053 NK_HLA L2
ENSG00000142937 RPS8 -109260 sc-eQTL 3.06e-01 -0.0937 0.0912 0.053 NK_HLA L2
ENSG00000159214 CCDC24 674632 sc-eQTL 2.50e-01 -0.223 0.193 0.053 NK_HLA L2
ENSG00000162415 ZSWIM5 -640218 sc-eQTL 3.43e-01 0.177 0.186 0.053 NK_HLA L2
ENSG00000173846 PLK3 -134386 sc-eQTL 5.08e-01 -0.125 0.189 0.053 NK_HLA L2
ENSG00000178028 DMAP1 452536 sc-eQTL 8.01e-01 -0.0539 0.213 0.053 NK_HLA L2
ENSG00000187147 RNF220 260797 sc-eQTL 4.26e-01 -0.146 0.182 0.053 NK_HLA L2
ENSG00000070759 TESK2 -825172 sc-eQTL 7.82e-01 0.0577 0.208 0.05 Pro_T L2
ENSG00000070785 EIF2B3 -320731 sc-eQTL 7.17e-01 0.067 0.185 0.05 Pro_T L2
ENSG00000117408 IPO13 719041 sc-eQTL 5.77e-01 -0.118 0.21 0.05 Pro_T L2
ENSG00000117410 ATP6V0B 691504 sc-eQTL 5.35e-01 -0.0753 0.121 0.05 Pro_T L2
ENSG00000117411 B4GALT2 687048 sc-eQTL 5.85e-01 0.0869 0.159 0.05 Pro_T L2
ENSG00000117419 ERI3 310731 sc-eQTL 2.92e-01 -0.209 0.198 0.05 Pro_T L2
ENSG00000117448 AKR1A1 -884552 sc-eQTL 8.77e-01 -0.0216 0.14 0.05 Pro_T L2
ENSG00000117450 PRDX1 -857056 sc-eQTL 5.23e-02 -0.234 0.12 0.05 Pro_T L2
ENSG00000126088 UROD -344959 sc-eQTL 9.47e-01 0.0115 0.173 0.05 Pro_T L2
ENSG00000126091 ST3GAL3 960167 sc-eQTL 8.33e-01 -0.041 0.195 0.05 Pro_T L2
ENSG00000126106 TMEM53 -8490 sc-eQTL 3.26e-01 -0.193 0.196 0.05 Pro_T L2
ENSG00000126107 HECTD3 -345333 sc-eQTL 3.89e-01 -0.172 0.199 0.05 Pro_T L2
ENSG00000132768 DPH2 695991 sc-eQTL 8.44e-01 0.0386 0.196 0.05 Pro_T L2
ENSG00000132773 TOE1 -674061 sc-eQTL 6.10e-01 0.107 0.209 0.05 Pro_T L2
ENSG00000132780 NASP -917855 sc-eQTL 4.55e-01 -0.0794 0.106 0.05 Pro_T L2
ENSG00000132781 MUTYH -674902 sc-eQTL 2.24e-01 0.257 0.211 0.05 Pro_T L2
ENSG00000142937 RPS8 -109260 sc-eQTL 6.14e-01 0.0425 0.0842 0.05 Pro_T L2
ENSG00000142945 KIF2C -73827 sc-eQTL 4.29e-01 -0.105 0.132 0.05 Pro_T L2
ENSG00000162415 ZSWIM5 -640218 sc-eQTL 5.72e-01 0.0939 0.166 0.05 Pro_T L2
ENSG00000173846 PLK3 -134386 sc-eQTL 2.87e-01 0.191 0.179 0.05 Pro_T L2
ENSG00000178028 DMAP1 452536 sc-eQTL 4.00e-01 -0.183 0.217 0.05 Pro_T L2
ENSG00000186603 HPDL -660904 sc-eQTL 4.46e-01 0.0931 0.122 0.05 Pro_T L2
ENSG00000187147 RNF220 260797 sc-eQTL 9.30e-01 -0.0143 0.162 0.05 Pro_T L2
ENSG00000198520 ARMH1 -8701 sc-eQTL 1.43e-01 -0.202 0.138 0.05 Pro_T L2
ENSG00000280670 CCDC163 -834088 sc-eQTL 6.99e-01 0.0632 0.163 0.05 Pro_T L2
ENSG00000070759 TESK2 -825172 sc-eQTL 3.00e-01 -0.231 0.222 0.061 gdT L2
ENSG00000070785 EIF2B3 -320731 sc-eQTL 9.43e-01 -0.0165 0.233 0.061 gdT L2
ENSG00000117408 IPO13 719041 sc-eQTL 3.65e-01 -0.208 0.229 0.061 gdT L2
ENSG00000117410 ATP6V0B 691504 sc-eQTL 3.64e-02 0.433 0.205 0.061 gdT L2
ENSG00000117411 B4GALT2 687048 sc-eQTL 1.01e-01 -0.352 0.213 0.061 gdT L2
ENSG00000117419 ERI3 310731 sc-eQTL 6.45e-01 0.116 0.252 0.061 gdT L2
ENSG00000117448 AKR1A1 -884552 sc-eQTL 7.03e-01 0.0851 0.223 0.061 gdT L2
ENSG00000117450 PRDX1 -857056 sc-eQTL 6.98e-01 0.0809 0.208 0.061 gdT L2
ENSG00000126088 UROD -344959 sc-eQTL 9.66e-01 0.00914 0.213 0.061 gdT L2
ENSG00000126091 ST3GAL3 960167 sc-eQTL 9.10e-02 -0.39 0.229 0.061 gdT L2
ENSG00000126106 TMEM53 -8490 sc-eQTL 2.42e-01 -0.253 0.216 0.061 gdT L2
ENSG00000126107 HECTD3 -345333 sc-eQTL 3.10e-01 -0.251 0.246 0.061 gdT L2
ENSG00000132768 DPH2 695991 sc-eQTL 8.55e-01 -0.0416 0.228 0.061 gdT L2
ENSG00000132773 TOE1 -674061 sc-eQTL 2.00e-01 -0.279 0.216 0.061 gdT L2
ENSG00000132780 NASP -917855 sc-eQTL 1.33e-01 0.331 0.219 0.061 gdT L2
ENSG00000132781 MUTYH -674902 sc-eQTL 1.91e-01 0.302 0.23 0.061 gdT L2
ENSG00000142937 RPS8 -109260 sc-eQTL 2.82e-01 0.0982 0.0909 0.061 gdT L2
ENSG00000142945 KIF2C -73827 sc-eQTL 2.04e-01 -0.171 0.134 0.061 gdT L2
ENSG00000162415 ZSWIM5 -640218 sc-eQTL 3.34e-01 -0.205 0.212 0.061 gdT L2
ENSG00000173846 PLK3 -134386 sc-eQTL 1.11e-01 -0.245 0.153 0.061 gdT L2
ENSG00000178028 DMAP1 452536 sc-eQTL 3.94e-01 0.197 0.23 0.061 gdT L2
ENSG00000186603 HPDL -660904 sc-eQTL 1.30e-01 0.281 0.184 0.061 gdT L2
ENSG00000187147 RNF220 260797 sc-eQTL 7.62e-01 0.0581 0.191 0.061 gdT L2
ENSG00000198520 ARMH1 -8701 sc-eQTL 1.09e-01 0.333 0.207 0.061 gdT L2
ENSG00000280670 CCDC163 -834088 sc-eQTL 3.61e-02 -0.447 0.211 0.061 gdT L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000070759 TESK2 -825172 eQTL 0.0268 0.062 0.028 0.0 0.0 0.0726
ENSG00000126091 ST3GAL3 960167 eQTL 0.0195 -0.0655 0.028 0.0 0.0 0.0726
ENSG00000126106 TMEM53 -8490 eQTL 6.0700000000000005e-21 -0.445 0.0463 0.0 0.00119 0.0726
ENSG00000159214 CCDC24 674632 eQTL 0.00894 0.173 0.0662 0.0 0.0 0.0726
ENSG00000222009 BTBD19 -142491 eQTL 0.00587 0.076 0.0275 0.0 0.0 0.0726
ENSG00000234329 AL604028.2 -985835 eQTL 0.00773 -0.124 0.0465 0.0 0.0 0.0726

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000126106 TMEM53 -8490 3.81e-05 3.3e-05 6.31e-06 1.55e-05 5.91e-06 1.42e-05 4.51e-05 4.59e-06 3.16e-05 1.57e-05 3.9e-05 1.74e-05 4.8e-05 1.42e-05 7.05e-06 1.94e-05 1.73e-05 2.56e-05 7.83e-06 6.75e-06 1.54e-05 3.41e-05 3.24e-05 8.82e-06 4.44e-05 8.26e-06 1.44e-05 1.3e-05 3.23e-05 2.5e-05 2.07e-05 1.63e-06 2.6e-06 7.05e-06 1.16e-05 5.68e-06 3.17e-06 3.16e-06 4.75e-06 3.35e-06 1.77e-06 3.92e-05 3.74e-06 3.6e-07 2.48e-06 3.86e-06 4.07e-06 1.61e-06 1.48e-06
ENSG00000142959 \N -122179 4.3e-06 3.99e-06 5.62e-07 1.93e-06 4.8e-07 9.66e-07 2.41e-06 9.98e-07 2.88e-06 1.12e-06 3.09e-06 2.02e-06 7.07e-06 1.2e-06 9.26e-07 1.84e-06 1.14e-06 2.24e-06 1.45e-06 9.89e-07 1.4e-06 3.65e-06 3.36e-06 1.24e-06 4.62e-06 1.03e-06 1.47e-06 1.44e-06 3.27e-06 2.2e-06 2e-06 2.86e-07 6.64e-07 1.34e-06 1.82e-06 7.45e-07 1.03e-06 4.65e-07 1.19e-06 3.99e-07 2.08e-07 4.95e-06 3.83e-07 8.98e-08 3.27e-07 3.14e-07 8.61e-07 2.64e-07 2.13e-07
ENSG00000178028 \N 452536 2.74e-07 1.25e-07 3.71e-08 1.8e-07 9.01e-08 9.76e-08 1.42e-07 5.19e-08 1.44e-07 4.4e-08 1.62e-07 8.59e-08 1.59e-07 6.38e-08 5.84e-08 7.26e-08 4.94e-08 1.14e-07 7.12e-08 4.21e-08 1.05e-07 1.28e-07 1.34e-07 3.42e-08 1.32e-07 1.14e-07 1.11e-07 9.74e-08 1.05e-07 1.12e-07 9.64e-08 3.7e-08 3.3e-08 8.55e-08 8.96e-08 3.77e-08 5.1e-08 9.23e-08 6.43e-08 3.8e-08 5.28e-08 1.35e-07 4.04e-08 1.43e-08 3.4e-08 1.99e-08 1.23e-07 3.99e-09 4.88e-08
ENSG00000222009 BTBD19 -142491 3.24e-06 2.64e-06 2.71e-07 1.64e-06 4.68e-07 7.85e-07 1.82e-06 6.09e-07 1.86e-06 6.73e-07 1.93e-06 1.26e-06 5.73e-06 1.14e-06 3.28e-07 1.17e-06 1.05e-06 1.2e-06 1.54e-06 1.5e-06 6.75e-07 2.87e-06 2.16e-06 9.37e-07 3.5e-06 1.12e-06 1.16e-06 1.79e-06 1.87e-06 1.62e-06 1.53e-06 2.85e-07 4.8e-07 1.14e-06 9.89e-07 5.24e-07 9.05e-07 4.21e-07 1.18e-06 3.79e-07 2.14e-07 3.43e-06 5.11e-07 6.41e-08 3.75e-07 3.24e-07 4.23e-07 9.26e-08 1.97e-07