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Genes within 1Mb (chr1:44661576:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000070759 TESK2 -829587 sc-eQTL 8.92e-01 0.0288 0.211 0.051 CD8_TCM L2
ENSG00000070785 EIF2B3 -325146 sc-eQTL 5.03e-01 -0.145 0.216 0.051 CD8_TCM L2
ENSG00000117408 IPO13 714626 sc-eQTL 1.98e-01 -0.261 0.202 0.051 CD8_TCM L2
ENSG00000117410 ATP6V0B 687089 sc-eQTL 7.67e-01 -0.0528 0.178 0.051 CD8_TCM L2
ENSG00000117419 ERI3 306316 sc-eQTL 8.97e-01 -0.0286 0.221 0.051 CD8_TCM L2
ENSG00000117448 AKR1A1 -888967 sc-eQTL 6.15e-01 -0.103 0.205 0.051 CD8_TCM L2
ENSG00000117450 PRDX1 -861471 sc-eQTL 9.15e-01 -0.0165 0.154 0.051 CD8_TCM L2
ENSG00000126088 UROD -349374 sc-eQTL 8.40e-01 0.0424 0.21 0.051 CD8_TCM L2
ENSG00000126091 ST3GAL3 955752 sc-eQTL 3.28e-01 0.211 0.215 0.051 CD8_TCM L2
ENSG00000126107 HECTD3 -349748 sc-eQTL 9.06e-01 -0.0263 0.222 0.051 CD8_TCM L2
ENSG00000132768 DPH2 691576 sc-eQTL 7.05e-01 -0.0809 0.213 0.051 CD8_TCM L2
ENSG00000132773 TOE1 -678476 sc-eQTL 1.97e-02 0.457 0.194 0.051 CD8_TCM L2
ENSG00000132780 NASP -922270 sc-eQTL 4.21e-01 0.137 0.17 0.051 CD8_TCM L2
ENSG00000132781 MUTYH -679317 sc-eQTL 5.23e-01 -0.145 0.226 0.051 CD8_TCM L2
ENSG00000142937 RPS8 -113675 sc-eQTL 7.38e-01 0.0373 0.111 0.051 CD8_TCM L2
ENSG00000162415 ZSWIM5 -644633 sc-eQTL 1.56e-02 0.469 0.192 0.051 CD8_TCM L2
ENSG00000173846 PLK3 -138801 sc-eQTL 7.11e-01 -0.0547 0.148 0.051 CD8_TCM L2
ENSG00000178028 DMAP1 448121 sc-eQTL 5.84e-01 -0.121 0.221 0.051 CD8_TCM L2
ENSG00000187147 RNF220 256382 sc-eQTL 9.12e-01 0.0205 0.185 0.051 CD8_TCM L2
ENSG00000198520 ARMH1 -13116 sc-eQTL 9.05e-02 0.3 0.176 0.051 CD8_TCM L2
ENSG00000070759 TESK2 -829587 sc-eQTL 3.52e-01 -0.194 0.208 0.053 CD8_TEM L2
ENSG00000070785 EIF2B3 -325146 sc-eQTL 2.73e-01 0.226 0.205 0.053 CD8_TEM L2
ENSG00000117408 IPO13 714626 sc-eQTL 1.01e-01 0.332 0.202 0.053 CD8_TEM L2
ENSG00000117410 ATP6V0B 687089 sc-eQTL 6.30e-01 0.0947 0.196 0.053 CD8_TEM L2
ENSG00000117419 ERI3 306316 sc-eQTL 9.82e-01 0.00534 0.231 0.053 CD8_TEM L2
ENSG00000117448 AKR1A1 -888967 sc-eQTL 5.52e-01 0.124 0.209 0.053 CD8_TEM L2
ENSG00000117450 PRDX1 -861471 sc-eQTL 5.96e-01 -0.098 0.184 0.053 CD8_TEM L2
ENSG00000126088 UROD -349374 sc-eQTL 8.81e-01 0.0305 0.204 0.053 CD8_TEM L2
ENSG00000126091 ST3GAL3 955752 sc-eQTL 5.02e-01 0.137 0.204 0.053 CD8_TEM L2
ENSG00000126107 HECTD3 -349748 sc-eQTL 1.34e-01 -0.315 0.21 0.053 CD8_TEM L2
ENSG00000132768 DPH2 691576 sc-eQTL 8.18e-01 -0.0481 0.208 0.053 CD8_TEM L2
ENSG00000132773 TOE1 -678476 sc-eQTL 7.16e-01 0.0752 0.206 0.053 CD8_TEM L2
ENSG00000132780 NASP -922270 sc-eQTL 3.36e-01 0.148 0.154 0.053 CD8_TEM L2
ENSG00000132781 MUTYH -679317 sc-eQTL 8.14e-02 -0.371 0.212 0.053 CD8_TEM L2
ENSG00000142937 RPS8 -113675 sc-eQTL 6.77e-01 0.051 0.122 0.053 CD8_TEM L2
ENSG00000162415 ZSWIM5 -644633 sc-eQTL 2.94e-01 0.222 0.211 0.053 CD8_TEM L2
ENSG00000173846 PLK3 -138801 sc-eQTL 1.62e-01 -0.201 0.143 0.053 CD8_TEM L2
ENSG00000178028 DMAP1 448121 sc-eQTL 9.02e-01 -0.0274 0.222 0.053 CD8_TEM L2
ENSG00000187147 RNF220 256382 sc-eQTL 8.08e-01 -0.0494 0.203 0.053 CD8_TEM L2
ENSG00000198520 ARMH1 -13116 sc-eQTL 8.31e-01 0.0414 0.194 0.053 CD8_TEM L2
ENSG00000070759 TESK2 -829587 sc-eQTL 3.23e-01 -0.196 0.198 0.051 NK_CD56bright L2
ENSG00000070785 EIF2B3 -325146 sc-eQTL 5.11e-01 0.14 0.212 0.051 NK_CD56bright L2
ENSG00000117408 IPO13 714626 sc-eQTL 8.39e-01 0.0422 0.208 0.051 NK_CD56bright L2
ENSG00000117410 ATP6V0B 687089 sc-eQTL 1.24e-01 0.318 0.206 0.051 NK_CD56bright L2
ENSG00000117411 B4GALT2 682633 sc-eQTL 1.17e-02 -0.469 0.184 0.051 NK_CD56bright L2
ENSG00000117419 ERI3 306316 sc-eQTL 7.30e-01 -0.074 0.214 0.051 NK_CD56bright L2
ENSG00000117448 AKR1A1 -888967 sc-eQTL 3.66e-01 -0.175 0.194 0.051 NK_CD56bright L2
ENSG00000117450 PRDX1 -861471 sc-eQTL 2.15e-01 -0.229 0.184 0.051 NK_CD56bright L2
ENSG00000126088 UROD -349374 sc-eQTL 8.35e-01 0.0379 0.182 0.051 NK_CD56bright L2
ENSG00000126091 ST3GAL3 955752 sc-eQTL 7.62e-01 -0.0643 0.212 0.051 NK_CD56bright L2
ENSG00000126106 TMEM53 -12905 sc-eQTL 6.20e-01 -0.101 0.203 0.051 NK_CD56bright L2
ENSG00000126107 HECTD3 -349748 sc-eQTL 2.71e-01 -0.228 0.206 0.051 NK_CD56bright L2
ENSG00000132768 DPH2 691576 sc-eQTL 3.86e-01 0.179 0.206 0.051 NK_CD56bright L2
ENSG00000132773 TOE1 -678476 sc-eQTL 7.94e-01 -0.0498 0.191 0.051 NK_CD56bright L2
ENSG00000132780 NASP -922270 sc-eQTL 4.36e-01 0.142 0.182 0.051 NK_CD56bright L2
ENSG00000132781 MUTYH -679317 sc-eQTL 1.10e-01 0.358 0.223 0.051 NK_CD56bright L2
ENSG00000142937 RPS8 -113675 sc-eQTL 3.85e-01 0.0862 0.0989 0.051 NK_CD56bright L2
ENSG00000159214 CCDC24 670217 sc-eQTL 1.46e-01 0.296 0.203 0.051 NK_CD56bright L2
ENSG00000162415 ZSWIM5 -644633 sc-eQTL 8.29e-01 0.0391 0.181 0.051 NK_CD56bright L2
ENSG00000173846 PLK3 -138801 sc-eQTL 5.17e-01 0.121 0.186 0.051 NK_CD56bright L2
ENSG00000178028 DMAP1 448121 sc-eQTL 6.20e-01 -0.11 0.221 0.051 NK_CD56bright L2
ENSG00000187147 RNF220 256382 sc-eQTL 4.55e-01 -0.137 0.184 0.051 NK_CD56bright L2
ENSG00000070759 TESK2 -829587 sc-eQTL 8.17e-01 0.0471 0.204 0.053 NK_HLA L2
ENSG00000070785 EIF2B3 -325146 sc-eQTL 5.68e-01 0.12 0.209 0.053 NK_HLA L2
ENSG00000117408 IPO13 714626 sc-eQTL 9.45e-01 -0.0136 0.197 0.053 NK_HLA L2
ENSG00000117410 ATP6V0B 687089 sc-eQTL 2.14e-01 -0.252 0.202 0.053 NK_HLA L2
ENSG00000117411 B4GALT2 682633 sc-eQTL 5.32e-01 -0.119 0.189 0.053 NK_HLA L2
ENSG00000117419 ERI3 306316 sc-eQTL 8.83e-01 0.0312 0.212 0.053 NK_HLA L2
ENSG00000117448 AKR1A1 -888967 sc-eQTL 1.34e-01 0.315 0.209 0.053 NK_HLA L2
ENSG00000117450 PRDX1 -861471 sc-eQTL 4.63e-02 0.358 0.178 0.053 NK_HLA L2
ENSG00000126088 UROD -349374 sc-eQTL 1.97e-01 -0.272 0.211 0.053 NK_HLA L2
ENSG00000126091 ST3GAL3 955752 sc-eQTL 9.36e-01 0.0168 0.21 0.053 NK_HLA L2
ENSG00000126106 TMEM53 -12905 sc-eQTL 4.84e-01 -0.141 0.2 0.053 NK_HLA L2
ENSG00000126107 HECTD3 -349748 sc-eQTL 6.66e-01 0.0965 0.224 0.053 NK_HLA L2
ENSG00000132768 DPH2 691576 sc-eQTL 4.11e-01 -0.178 0.216 0.053 NK_HLA L2
ENSG00000132773 TOE1 -678476 sc-eQTL 7.00e-01 -0.0798 0.207 0.053 NK_HLA L2
ENSG00000132780 NASP -922270 sc-eQTL 6.41e-01 0.0971 0.208 0.053 NK_HLA L2
ENSG00000132781 MUTYH -679317 sc-eQTL 6.19e-01 0.108 0.216 0.053 NK_HLA L2
ENSG00000142937 RPS8 -113675 sc-eQTL 3.06e-01 -0.0937 0.0912 0.053 NK_HLA L2
ENSG00000159214 CCDC24 670217 sc-eQTL 2.50e-01 -0.223 0.193 0.053 NK_HLA L2
ENSG00000162415 ZSWIM5 -644633 sc-eQTL 3.43e-01 0.177 0.186 0.053 NK_HLA L2
ENSG00000173846 PLK3 -138801 sc-eQTL 5.08e-01 -0.125 0.189 0.053 NK_HLA L2
ENSG00000178028 DMAP1 448121 sc-eQTL 8.01e-01 -0.0539 0.213 0.053 NK_HLA L2
ENSG00000187147 RNF220 256382 sc-eQTL 4.26e-01 -0.146 0.182 0.053 NK_HLA L2
ENSG00000070759 TESK2 -829587 sc-eQTL 7.82e-01 0.0577 0.208 0.05 Pro_T L2
ENSG00000070785 EIF2B3 -325146 sc-eQTL 7.17e-01 0.067 0.185 0.05 Pro_T L2
ENSG00000117408 IPO13 714626 sc-eQTL 5.77e-01 -0.118 0.21 0.05 Pro_T L2
ENSG00000117410 ATP6V0B 687089 sc-eQTL 5.35e-01 -0.0753 0.121 0.05 Pro_T L2
ENSG00000117411 B4GALT2 682633 sc-eQTL 5.85e-01 0.0869 0.159 0.05 Pro_T L2
ENSG00000117419 ERI3 306316 sc-eQTL 2.92e-01 -0.209 0.198 0.05 Pro_T L2
ENSG00000117448 AKR1A1 -888967 sc-eQTL 8.77e-01 -0.0216 0.14 0.05 Pro_T L2
ENSG00000117450 PRDX1 -861471 sc-eQTL 5.23e-02 -0.234 0.12 0.05 Pro_T L2
ENSG00000126088 UROD -349374 sc-eQTL 9.47e-01 0.0115 0.173 0.05 Pro_T L2
ENSG00000126091 ST3GAL3 955752 sc-eQTL 8.33e-01 -0.041 0.195 0.05 Pro_T L2
ENSG00000126106 TMEM53 -12905 sc-eQTL 3.26e-01 -0.193 0.196 0.05 Pro_T L2
ENSG00000126107 HECTD3 -349748 sc-eQTL 3.89e-01 -0.172 0.199 0.05 Pro_T L2
ENSG00000132768 DPH2 691576 sc-eQTL 8.44e-01 0.0386 0.196 0.05 Pro_T L2
ENSG00000132773 TOE1 -678476 sc-eQTL 6.10e-01 0.107 0.209 0.05 Pro_T L2
ENSG00000132780 NASP -922270 sc-eQTL 4.55e-01 -0.0794 0.106 0.05 Pro_T L2
ENSG00000132781 MUTYH -679317 sc-eQTL 2.24e-01 0.257 0.211 0.05 Pro_T L2
ENSG00000142937 RPS8 -113675 sc-eQTL 6.14e-01 0.0425 0.0842 0.05 Pro_T L2
ENSG00000142945 KIF2C -78242 sc-eQTL 4.29e-01 -0.105 0.132 0.05 Pro_T L2
ENSG00000162415 ZSWIM5 -644633 sc-eQTL 5.72e-01 0.0939 0.166 0.05 Pro_T L2
ENSG00000173846 PLK3 -138801 sc-eQTL 2.87e-01 0.191 0.179 0.05 Pro_T L2
ENSG00000178028 DMAP1 448121 sc-eQTL 4.00e-01 -0.183 0.217 0.05 Pro_T L2
ENSG00000186603 HPDL -665319 sc-eQTL 4.46e-01 0.0931 0.122 0.05 Pro_T L2
ENSG00000187147 RNF220 256382 sc-eQTL 9.30e-01 -0.0143 0.162 0.05 Pro_T L2
ENSG00000198520 ARMH1 -13116 sc-eQTL 1.43e-01 -0.202 0.138 0.05 Pro_T L2
ENSG00000280670 CCDC163 -838503 sc-eQTL 6.99e-01 0.0632 0.163 0.05 Pro_T L2
ENSG00000070759 TESK2 -829587 sc-eQTL 3.00e-01 -0.231 0.222 0.061 gdT L2
ENSG00000070785 EIF2B3 -325146 sc-eQTL 9.43e-01 -0.0165 0.233 0.061 gdT L2
ENSG00000117408 IPO13 714626 sc-eQTL 3.65e-01 -0.208 0.229 0.061 gdT L2
ENSG00000117410 ATP6V0B 687089 sc-eQTL 3.64e-02 0.433 0.205 0.061 gdT L2
ENSG00000117411 B4GALT2 682633 sc-eQTL 1.01e-01 -0.352 0.213 0.061 gdT L2
ENSG00000117419 ERI3 306316 sc-eQTL 6.45e-01 0.116 0.252 0.061 gdT L2
ENSG00000117448 AKR1A1 -888967 sc-eQTL 7.03e-01 0.0851 0.223 0.061 gdT L2
ENSG00000117450 PRDX1 -861471 sc-eQTL 6.98e-01 0.0809 0.208 0.061 gdT L2
ENSG00000126088 UROD -349374 sc-eQTL 9.66e-01 0.00914 0.213 0.061 gdT L2
ENSG00000126091 ST3GAL3 955752 sc-eQTL 9.10e-02 -0.39 0.229 0.061 gdT L2
ENSG00000126106 TMEM53 -12905 sc-eQTL 2.42e-01 -0.253 0.216 0.061 gdT L2
ENSG00000126107 HECTD3 -349748 sc-eQTL 3.10e-01 -0.251 0.246 0.061 gdT L2
ENSG00000132768 DPH2 691576 sc-eQTL 8.55e-01 -0.0416 0.228 0.061 gdT L2
ENSG00000132773 TOE1 -678476 sc-eQTL 2.00e-01 -0.279 0.216 0.061 gdT L2
ENSG00000132780 NASP -922270 sc-eQTL 1.33e-01 0.331 0.219 0.061 gdT L2
ENSG00000132781 MUTYH -679317 sc-eQTL 1.91e-01 0.302 0.23 0.061 gdT L2
ENSG00000142937 RPS8 -113675 sc-eQTL 2.82e-01 0.0982 0.0909 0.061 gdT L2
ENSG00000142945 KIF2C -78242 sc-eQTL 2.04e-01 -0.171 0.134 0.061 gdT L2
ENSG00000162415 ZSWIM5 -644633 sc-eQTL 3.34e-01 -0.205 0.212 0.061 gdT L2
ENSG00000173846 PLK3 -138801 sc-eQTL 1.11e-01 -0.245 0.153 0.061 gdT L2
ENSG00000178028 DMAP1 448121 sc-eQTL 3.94e-01 0.197 0.23 0.061 gdT L2
ENSG00000186603 HPDL -665319 sc-eQTL 1.30e-01 0.281 0.184 0.061 gdT L2
ENSG00000187147 RNF220 256382 sc-eQTL 7.62e-01 0.0581 0.191 0.061 gdT L2
ENSG00000198520 ARMH1 -13116 sc-eQTL 1.09e-01 0.333 0.207 0.061 gdT L2
ENSG00000280670 CCDC163 -838503 sc-eQTL 3.61e-02 -0.447 0.211 0.061 gdT L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000070759 TESK2 -829587 eQTL 0.0268 0.062 0.028 0.0 0.0 0.0726
ENSG00000126091 ST3GAL3 955752 eQTL 0.0195 -0.0655 0.028 0.0 0.0 0.0726
ENSG00000126106 TMEM53 -12905 eQTL 6.0700000000000005e-21 -0.445 0.0463 0.0 0.00119 0.0726
ENSG00000159214 CCDC24 670217 eQTL 0.00894 0.173 0.0662 0.0 0.0 0.0726
ENSG00000222009 BTBD19 -146906 eQTL 0.00587 0.076 0.0275 0.0 0.0 0.0726
ENSG00000234329 AL604028.2 -990250 eQTL 0.00773 -0.124 0.0465 0.0 0.0 0.0726

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000126106 TMEM53 -12905 1.73e-05 2.04e-05 4.32e-06 1.22e-05 3.83e-06 1.02e-05 2.95e-05 3.5e-06 1.88e-05 9.88e-06 2.48e-05 9.52e-06 3.56e-05 8.94e-06 5.36e-06 1.15e-05 1.14e-05 1.78e-05 6.61e-06 5.45e-06 9.96e-06 2.09e-05 2.05e-05 7.77e-06 3.2e-05 5.78e-06 8.21e-06 8.35e-06 2.3e-05 2.61e-05 1.29e-05 1.6e-06 2.37e-06 6.6e-06 8.76e-06 5.16e-06 2.85e-06 2.99e-06 4.3e-06 3.3e-06 1.76e-06 2.49e-05 2.64e-06 3.99e-07 2.07e-06 2.96e-06 3.35e-06 1.42e-06 1.51e-06
ENSG00000142959 \N -126594 4.36e-06 4.35e-06 7.63e-07 2.14e-06 1.2e-06 1.27e-06 3e-06 9.52e-07 3.32e-06 1.94e-06 4.1e-06 2.72e-06 6.55e-06 1.81e-06 1.4e-06 2.37e-06 2.04e-06 2.69e-06 1.33e-06 9.72e-07 2.29e-06 4.1e-06 3.51e-06 1.63e-06 4.78e-06 1.35e-06 2.15e-06 1.46e-06 4.18e-06 4.13e-06 2.01e-06 5.93e-07 6.52e-07 1.92e-06 1.94e-06 8.53e-07 8.96e-07 4.93e-07 1.06e-06 3.8e-07 4.63e-07 4.88e-06 3.97e-07 1.67e-07 3.58e-07 3.92e-07 7.75e-07 3.18e-07 3.25e-07
ENSG00000178028 \N 448121 8.85e-07 5.6e-07 1.23e-07 3.92e-07 1.12e-07 2.46e-07 5.49e-07 1.54e-07 4.3e-07 2.57e-07 7.15e-07 3.84e-07 8.16e-07 1.49e-07 2.48e-07 2.23e-07 3.69e-07 4.11e-07 2.6e-07 1.69e-07 2.17e-07 3.92e-07 3.69e-07 1.76e-07 7.71e-07 2.49e-07 3.16e-07 2.71e-07 3.88e-07 6.47e-07 3.1e-07 5.82e-08 4.57e-08 1.5e-07 3.38e-07 1.02e-07 1.06e-07 1.1e-07 6.81e-08 2.8e-08 9.84e-08 4.68e-07 5.38e-08 1.07e-08 1.69e-07 1.44e-08 1.32e-07 2.41e-08 6.17e-08
ENSG00000222009 BTBD19 -146906 3.88e-06 3.5e-06 5.8e-07 1.96e-06 8.7e-07 8.44e-07 2.56e-06 9.05e-07 2.43e-06 1.42e-06 3.25e-06 1.79e-06 5.21e-06 1.28e-06 9.2e-07 2.06e-06 1.56e-06 2.13e-06 1.52e-06 1.2e-06 1.68e-06 3.47e-06 3.32e-06 1.8e-06 4.31e-06 1.25e-06 1.57e-06 1.73e-06 3.55e-06 3.11e-06 1.91e-06 4.69e-07 7.33e-07 1.65e-06 1.74e-06 8.93e-07 9.08e-07 4.67e-07 1.3e-06 3.47e-07 2.78e-07 4.14e-06 5.42e-07 1.68e-07 3.5e-07 3.8e-07 7.84e-07 2.22e-07 1.94e-07