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Genes within 1Mb (chr1:44660702:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000070759 TESK2 -830461 sc-eQTL 8.92e-01 0.0288 0.211 0.051 CD8_TCM L2
ENSG00000070785 EIF2B3 -326020 sc-eQTL 5.03e-01 -0.145 0.216 0.051 CD8_TCM L2
ENSG00000117408 IPO13 713752 sc-eQTL 1.98e-01 -0.261 0.202 0.051 CD8_TCM L2
ENSG00000117410 ATP6V0B 686215 sc-eQTL 7.67e-01 -0.0528 0.178 0.051 CD8_TCM L2
ENSG00000117419 ERI3 305442 sc-eQTL 8.97e-01 -0.0286 0.221 0.051 CD8_TCM L2
ENSG00000117448 AKR1A1 -889841 sc-eQTL 6.15e-01 -0.103 0.205 0.051 CD8_TCM L2
ENSG00000117450 PRDX1 -862345 sc-eQTL 9.15e-01 -0.0165 0.154 0.051 CD8_TCM L2
ENSG00000126088 UROD -350248 sc-eQTL 8.40e-01 0.0424 0.21 0.051 CD8_TCM L2
ENSG00000126091 ST3GAL3 954878 sc-eQTL 3.28e-01 0.211 0.215 0.051 CD8_TCM L2
ENSG00000126107 HECTD3 -350622 sc-eQTL 9.06e-01 -0.0263 0.222 0.051 CD8_TCM L2
ENSG00000132768 DPH2 690702 sc-eQTL 7.05e-01 -0.0809 0.213 0.051 CD8_TCM L2
ENSG00000132773 TOE1 -679350 sc-eQTL 1.97e-02 0.457 0.194 0.051 CD8_TCM L2
ENSG00000132780 NASP -923144 sc-eQTL 4.21e-01 0.137 0.17 0.051 CD8_TCM L2
ENSG00000132781 MUTYH -680191 sc-eQTL 5.23e-01 -0.145 0.226 0.051 CD8_TCM L2
ENSG00000142937 RPS8 -114549 sc-eQTL 7.38e-01 0.0373 0.111 0.051 CD8_TCM L2
ENSG00000162415 ZSWIM5 -645507 sc-eQTL 1.56e-02 0.469 0.192 0.051 CD8_TCM L2
ENSG00000173846 PLK3 -139675 sc-eQTL 7.11e-01 -0.0547 0.148 0.051 CD8_TCM L2
ENSG00000178028 DMAP1 447247 sc-eQTL 5.84e-01 -0.121 0.221 0.051 CD8_TCM L2
ENSG00000187147 RNF220 255508 sc-eQTL 9.12e-01 0.0205 0.185 0.051 CD8_TCM L2
ENSG00000198520 ARMH1 -13990 sc-eQTL 9.05e-02 0.3 0.176 0.051 CD8_TCM L2
ENSG00000070759 TESK2 -830461 sc-eQTL 3.52e-01 -0.194 0.208 0.053 CD8_TEM L2
ENSG00000070785 EIF2B3 -326020 sc-eQTL 2.73e-01 0.226 0.205 0.053 CD8_TEM L2
ENSG00000117408 IPO13 713752 sc-eQTL 1.01e-01 0.332 0.202 0.053 CD8_TEM L2
ENSG00000117410 ATP6V0B 686215 sc-eQTL 6.30e-01 0.0947 0.196 0.053 CD8_TEM L2
ENSG00000117419 ERI3 305442 sc-eQTL 9.82e-01 0.00534 0.231 0.053 CD8_TEM L2
ENSG00000117448 AKR1A1 -889841 sc-eQTL 5.52e-01 0.124 0.209 0.053 CD8_TEM L2
ENSG00000117450 PRDX1 -862345 sc-eQTL 5.96e-01 -0.098 0.184 0.053 CD8_TEM L2
ENSG00000126088 UROD -350248 sc-eQTL 8.81e-01 0.0305 0.204 0.053 CD8_TEM L2
ENSG00000126091 ST3GAL3 954878 sc-eQTL 5.02e-01 0.137 0.204 0.053 CD8_TEM L2
ENSG00000126107 HECTD3 -350622 sc-eQTL 1.34e-01 -0.315 0.21 0.053 CD8_TEM L2
ENSG00000132768 DPH2 690702 sc-eQTL 8.18e-01 -0.0481 0.208 0.053 CD8_TEM L2
ENSG00000132773 TOE1 -679350 sc-eQTL 7.16e-01 0.0752 0.206 0.053 CD8_TEM L2
ENSG00000132780 NASP -923144 sc-eQTL 3.36e-01 0.148 0.154 0.053 CD8_TEM L2
ENSG00000132781 MUTYH -680191 sc-eQTL 8.14e-02 -0.371 0.212 0.053 CD8_TEM L2
ENSG00000142937 RPS8 -114549 sc-eQTL 6.77e-01 0.051 0.122 0.053 CD8_TEM L2
ENSG00000162415 ZSWIM5 -645507 sc-eQTL 2.94e-01 0.222 0.211 0.053 CD8_TEM L2
ENSG00000173846 PLK3 -139675 sc-eQTL 1.62e-01 -0.201 0.143 0.053 CD8_TEM L2
ENSG00000178028 DMAP1 447247 sc-eQTL 9.02e-01 -0.0274 0.222 0.053 CD8_TEM L2
ENSG00000187147 RNF220 255508 sc-eQTL 8.08e-01 -0.0494 0.203 0.053 CD8_TEM L2
ENSG00000198520 ARMH1 -13990 sc-eQTL 8.31e-01 0.0414 0.194 0.053 CD8_TEM L2
ENSG00000070759 TESK2 -830461 sc-eQTL 3.23e-01 -0.196 0.198 0.051 NK_CD56bright L2
ENSG00000070785 EIF2B3 -326020 sc-eQTL 5.11e-01 0.14 0.212 0.051 NK_CD56bright L2
ENSG00000117408 IPO13 713752 sc-eQTL 8.39e-01 0.0422 0.208 0.051 NK_CD56bright L2
ENSG00000117410 ATP6V0B 686215 sc-eQTL 1.24e-01 0.318 0.206 0.051 NK_CD56bright L2
ENSG00000117411 B4GALT2 681759 sc-eQTL 1.17e-02 -0.469 0.184 0.051 NK_CD56bright L2
ENSG00000117419 ERI3 305442 sc-eQTL 7.30e-01 -0.074 0.214 0.051 NK_CD56bright L2
ENSG00000117448 AKR1A1 -889841 sc-eQTL 3.66e-01 -0.175 0.194 0.051 NK_CD56bright L2
ENSG00000117450 PRDX1 -862345 sc-eQTL 2.15e-01 -0.229 0.184 0.051 NK_CD56bright L2
ENSG00000126088 UROD -350248 sc-eQTL 8.35e-01 0.0379 0.182 0.051 NK_CD56bright L2
ENSG00000126091 ST3GAL3 954878 sc-eQTL 7.62e-01 -0.0643 0.212 0.051 NK_CD56bright L2
ENSG00000126106 TMEM53 -13779 sc-eQTL 6.20e-01 -0.101 0.203 0.051 NK_CD56bright L2
ENSG00000126107 HECTD3 -350622 sc-eQTL 2.71e-01 -0.228 0.206 0.051 NK_CD56bright L2
ENSG00000132768 DPH2 690702 sc-eQTL 3.86e-01 0.179 0.206 0.051 NK_CD56bright L2
ENSG00000132773 TOE1 -679350 sc-eQTL 7.94e-01 -0.0498 0.191 0.051 NK_CD56bright L2
ENSG00000132780 NASP -923144 sc-eQTL 4.36e-01 0.142 0.182 0.051 NK_CD56bright L2
ENSG00000132781 MUTYH -680191 sc-eQTL 1.10e-01 0.358 0.223 0.051 NK_CD56bright L2
ENSG00000142937 RPS8 -114549 sc-eQTL 3.85e-01 0.0862 0.0989 0.051 NK_CD56bright L2
ENSG00000159214 CCDC24 669343 sc-eQTL 1.46e-01 0.296 0.203 0.051 NK_CD56bright L2
ENSG00000162415 ZSWIM5 -645507 sc-eQTL 8.29e-01 0.0391 0.181 0.051 NK_CD56bright L2
ENSG00000173846 PLK3 -139675 sc-eQTL 5.17e-01 0.121 0.186 0.051 NK_CD56bright L2
ENSG00000178028 DMAP1 447247 sc-eQTL 6.20e-01 -0.11 0.221 0.051 NK_CD56bright L2
ENSG00000187147 RNF220 255508 sc-eQTL 4.55e-01 -0.137 0.184 0.051 NK_CD56bright L2
ENSG00000070759 TESK2 -830461 sc-eQTL 8.17e-01 0.0471 0.204 0.053 NK_HLA L2
ENSG00000070785 EIF2B3 -326020 sc-eQTL 5.68e-01 0.12 0.209 0.053 NK_HLA L2
ENSG00000117408 IPO13 713752 sc-eQTL 9.45e-01 -0.0136 0.197 0.053 NK_HLA L2
ENSG00000117410 ATP6V0B 686215 sc-eQTL 2.14e-01 -0.252 0.202 0.053 NK_HLA L2
ENSG00000117411 B4GALT2 681759 sc-eQTL 5.32e-01 -0.119 0.189 0.053 NK_HLA L2
ENSG00000117419 ERI3 305442 sc-eQTL 8.83e-01 0.0312 0.212 0.053 NK_HLA L2
ENSG00000117448 AKR1A1 -889841 sc-eQTL 1.34e-01 0.315 0.209 0.053 NK_HLA L2
ENSG00000117450 PRDX1 -862345 sc-eQTL 4.63e-02 0.358 0.178 0.053 NK_HLA L2
ENSG00000126088 UROD -350248 sc-eQTL 1.97e-01 -0.272 0.211 0.053 NK_HLA L2
ENSG00000126091 ST3GAL3 954878 sc-eQTL 9.36e-01 0.0168 0.21 0.053 NK_HLA L2
ENSG00000126106 TMEM53 -13779 sc-eQTL 4.84e-01 -0.141 0.2 0.053 NK_HLA L2
ENSG00000126107 HECTD3 -350622 sc-eQTL 6.66e-01 0.0965 0.224 0.053 NK_HLA L2
ENSG00000132768 DPH2 690702 sc-eQTL 4.11e-01 -0.178 0.216 0.053 NK_HLA L2
ENSG00000132773 TOE1 -679350 sc-eQTL 7.00e-01 -0.0798 0.207 0.053 NK_HLA L2
ENSG00000132780 NASP -923144 sc-eQTL 6.41e-01 0.0971 0.208 0.053 NK_HLA L2
ENSG00000132781 MUTYH -680191 sc-eQTL 6.19e-01 0.108 0.216 0.053 NK_HLA L2
ENSG00000142937 RPS8 -114549 sc-eQTL 3.06e-01 -0.0937 0.0912 0.053 NK_HLA L2
ENSG00000159214 CCDC24 669343 sc-eQTL 2.50e-01 -0.223 0.193 0.053 NK_HLA L2
ENSG00000162415 ZSWIM5 -645507 sc-eQTL 3.43e-01 0.177 0.186 0.053 NK_HLA L2
ENSG00000173846 PLK3 -139675 sc-eQTL 5.08e-01 -0.125 0.189 0.053 NK_HLA L2
ENSG00000178028 DMAP1 447247 sc-eQTL 8.01e-01 -0.0539 0.213 0.053 NK_HLA L2
ENSG00000187147 RNF220 255508 sc-eQTL 4.26e-01 -0.146 0.182 0.053 NK_HLA L2
ENSG00000070759 TESK2 -830461 sc-eQTL 7.82e-01 0.0577 0.208 0.05 Pro_T L2
ENSG00000070785 EIF2B3 -326020 sc-eQTL 7.17e-01 0.067 0.185 0.05 Pro_T L2
ENSG00000117408 IPO13 713752 sc-eQTL 5.77e-01 -0.118 0.21 0.05 Pro_T L2
ENSG00000117410 ATP6V0B 686215 sc-eQTL 5.35e-01 -0.0753 0.121 0.05 Pro_T L2
ENSG00000117411 B4GALT2 681759 sc-eQTL 5.85e-01 0.0869 0.159 0.05 Pro_T L2
ENSG00000117419 ERI3 305442 sc-eQTL 2.92e-01 -0.209 0.198 0.05 Pro_T L2
ENSG00000117448 AKR1A1 -889841 sc-eQTL 8.77e-01 -0.0216 0.14 0.05 Pro_T L2
ENSG00000117450 PRDX1 -862345 sc-eQTL 5.23e-02 -0.234 0.12 0.05 Pro_T L2
ENSG00000126088 UROD -350248 sc-eQTL 9.47e-01 0.0115 0.173 0.05 Pro_T L2
ENSG00000126091 ST3GAL3 954878 sc-eQTL 8.33e-01 -0.041 0.195 0.05 Pro_T L2
ENSG00000126106 TMEM53 -13779 sc-eQTL 3.26e-01 -0.193 0.196 0.05 Pro_T L2
ENSG00000126107 HECTD3 -350622 sc-eQTL 3.89e-01 -0.172 0.199 0.05 Pro_T L2
ENSG00000132768 DPH2 690702 sc-eQTL 8.44e-01 0.0386 0.196 0.05 Pro_T L2
ENSG00000132773 TOE1 -679350 sc-eQTL 6.10e-01 0.107 0.209 0.05 Pro_T L2
ENSG00000132780 NASP -923144 sc-eQTL 4.55e-01 -0.0794 0.106 0.05 Pro_T L2
ENSG00000132781 MUTYH -680191 sc-eQTL 2.24e-01 0.257 0.211 0.05 Pro_T L2
ENSG00000142937 RPS8 -114549 sc-eQTL 6.14e-01 0.0425 0.0842 0.05 Pro_T L2
ENSG00000142945 KIF2C -79116 sc-eQTL 4.29e-01 -0.105 0.132 0.05 Pro_T L2
ENSG00000162415 ZSWIM5 -645507 sc-eQTL 5.72e-01 0.0939 0.166 0.05 Pro_T L2
ENSG00000173846 PLK3 -139675 sc-eQTL 2.87e-01 0.191 0.179 0.05 Pro_T L2
ENSG00000178028 DMAP1 447247 sc-eQTL 4.00e-01 -0.183 0.217 0.05 Pro_T L2
ENSG00000186603 HPDL -666193 sc-eQTL 4.46e-01 0.0931 0.122 0.05 Pro_T L2
ENSG00000187147 RNF220 255508 sc-eQTL 9.30e-01 -0.0143 0.162 0.05 Pro_T L2
ENSG00000198520 ARMH1 -13990 sc-eQTL 1.43e-01 -0.202 0.138 0.05 Pro_T L2
ENSG00000280670 CCDC163 -839377 sc-eQTL 6.99e-01 0.0632 0.163 0.05 Pro_T L2
ENSG00000070759 TESK2 -830461 sc-eQTL 3.00e-01 -0.231 0.222 0.061 gdT L2
ENSG00000070785 EIF2B3 -326020 sc-eQTL 9.43e-01 -0.0165 0.233 0.061 gdT L2
ENSG00000117408 IPO13 713752 sc-eQTL 3.65e-01 -0.208 0.229 0.061 gdT L2
ENSG00000117410 ATP6V0B 686215 sc-eQTL 3.64e-02 0.433 0.205 0.061 gdT L2
ENSG00000117411 B4GALT2 681759 sc-eQTL 1.01e-01 -0.352 0.213 0.061 gdT L2
ENSG00000117419 ERI3 305442 sc-eQTL 6.45e-01 0.116 0.252 0.061 gdT L2
ENSG00000117448 AKR1A1 -889841 sc-eQTL 7.03e-01 0.0851 0.223 0.061 gdT L2
ENSG00000117450 PRDX1 -862345 sc-eQTL 6.98e-01 0.0809 0.208 0.061 gdT L2
ENSG00000126088 UROD -350248 sc-eQTL 9.66e-01 0.00914 0.213 0.061 gdT L2
ENSG00000126091 ST3GAL3 954878 sc-eQTL 9.10e-02 -0.39 0.229 0.061 gdT L2
ENSG00000126106 TMEM53 -13779 sc-eQTL 2.42e-01 -0.253 0.216 0.061 gdT L2
ENSG00000126107 HECTD3 -350622 sc-eQTL 3.10e-01 -0.251 0.246 0.061 gdT L2
ENSG00000132768 DPH2 690702 sc-eQTL 8.55e-01 -0.0416 0.228 0.061 gdT L2
ENSG00000132773 TOE1 -679350 sc-eQTL 2.00e-01 -0.279 0.216 0.061 gdT L2
ENSG00000132780 NASP -923144 sc-eQTL 1.33e-01 0.331 0.219 0.061 gdT L2
ENSG00000132781 MUTYH -680191 sc-eQTL 1.91e-01 0.302 0.23 0.061 gdT L2
ENSG00000142937 RPS8 -114549 sc-eQTL 2.82e-01 0.0982 0.0909 0.061 gdT L2
ENSG00000142945 KIF2C -79116 sc-eQTL 2.04e-01 -0.171 0.134 0.061 gdT L2
ENSG00000162415 ZSWIM5 -645507 sc-eQTL 3.34e-01 -0.205 0.212 0.061 gdT L2
ENSG00000173846 PLK3 -139675 sc-eQTL 1.11e-01 -0.245 0.153 0.061 gdT L2
ENSG00000178028 DMAP1 447247 sc-eQTL 3.94e-01 0.197 0.23 0.061 gdT L2
ENSG00000186603 HPDL -666193 sc-eQTL 1.30e-01 0.281 0.184 0.061 gdT L2
ENSG00000187147 RNF220 255508 sc-eQTL 7.62e-01 0.0581 0.191 0.061 gdT L2
ENSG00000198520 ARMH1 -13990 sc-eQTL 1.09e-01 0.333 0.207 0.061 gdT L2
ENSG00000280670 CCDC163 -839377 sc-eQTL 3.61e-02 -0.447 0.211 0.061 gdT L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000070759 TESK2 -830461 eQTL 0.0276 0.0615 0.0279 0.0 0.0 0.0726
ENSG00000126091 ST3GAL3 954878 eQTL 0.0194 -0.0654 0.0279 0.0 0.0 0.0726
ENSG00000126106 TMEM53 -13779 eQTL 4.860000000000001e-21 -0.445 0.0461 0.0 0.00143 0.0726
ENSG00000159214 CCDC24 669343 eQTL 0.00893 0.173 0.066 0.0 0.0 0.0726
ENSG00000222009 BTBD19 -147780 eQTL 0.00526 0.0768 0.0275 0.0 0.0 0.0726
ENSG00000234329 AL604028.2 -991124 eQTL 0.00825 -0.123 0.0464 0.0 0.0 0.0726

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000126106 TMEM53 -13779 1.88e-05 2.36e-05 4.41e-06 1.35e-05 4e-06 1.03e-05 3.41e-05 3.69e-06 2.13e-05 9.82e-06 2.55e-05 1.08e-05 3.91e-05 9.95e-06 5.6e-06 1.15e-05 1.17e-05 1.78e-05 6.95e-06 6.66e-06 1.02e-05 2.16e-05 2.24e-05 9.41e-06 3.43e-05 5.98e-06 8.36e-06 8.88e-06 2.39e-05 3.25e-05 1.38e-05 1.64e-06 2.48e-06 7.07e-06 1.01e-05 5.51e-06 3.43e-06 3.16e-06 5e-06 3.69e-06 1.75e-06 2.7e-05 2.65e-06 4.37e-07 2.1e-06 2.98e-06 3.11e-06 1.41e-06 1.38e-06
ENSG00000142959 \N -127468 4.3e-06 5.12e-06 7.38e-07 3.29e-06 8.73e-07 1.55e-06 4.23e-06 1.03e-06 5.15e-06 2.22e-06 5.19e-06 3.49e-06 7.67e-06 1.94e-06 1.46e-06 2.49e-06 2e-06 2.72e-06 1.27e-06 1.19e-06 2.02e-06 4.23e-06 3.8e-06 1.44e-06 6.47e-06 1.38e-06 2.18e-06 1.75e-06 4.36e-06 4.23e-06 2.83e-06 4.91e-07 8.14e-07 1.57e-06 2.09e-06 9.43e-07 1.09e-06 5.45e-07 8.52e-07 6.22e-07 4.52e-07 5.69e-06 3.76e-07 1.8e-07 3.45e-07 4.64e-07 8.96e-07 2.26e-07 1.56e-07
ENSG00000178028 \N 447247 5.59e-07 6.09e-07 8.55e-08 4.31e-07 1.07e-07 1.97e-07 4.93e-07 1.21e-07 3.94e-07 2.06e-07 4.97e-07 3.48e-07 7.93e-07 1.48e-07 1.51e-07 1.53e-07 2.34e-07 3.12e-07 1.7e-07 1.73e-07 1.57e-07 2.96e-07 3.07e-07 1.25e-07 6.87e-07 2.32e-07 1.97e-07 2.44e-07 2.84e-07 4.72e-07 2.73e-07 5.99e-08 5.41e-08 1.4e-07 3.08e-07 7.56e-08 1.86e-07 7.75e-08 6.74e-08 2.24e-08 4.82e-08 4.55e-07 3.19e-08 5.77e-09 7.93e-08 1.88e-08 9.34e-08 3.14e-09 4.68e-08
ENSG00000222009 BTBD19 -147780 3.55e-06 4.91e-06 4.93e-07 2.65e-06 7.03e-07 1.03e-06 2.84e-06 9.75e-07 4.15e-06 1.67e-06 4.22e-06 3.21e-06 7.5e-06 2.19e-06 9.86e-07 2.03e-06 1.8e-06 2.08e-06 1.49e-06 9.69e-07 1.41e-06 3.49e-06 3.54e-06 1.81e-06 4.95e-06 1.21e-06 1.57e-06 1.41e-06 3.78e-06 3.75e-06 1.98e-06 4.91e-07 5.81e-07 1.87e-06 2.01e-06 9.54e-07 9.21e-07 4.37e-07 9.49e-07 3.71e-07 2.8e-07 5.01e-06 6.52e-07 1.74e-07 2.97e-07 3.52e-07 6.93e-07 2.33e-07 2.46e-07