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Genes within 1Mb (chr1:44654293:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000070759 TESK2 -836870 sc-eQTL 8.92e-01 0.0288 0.211 0.051 CD8_TCM L2
ENSG00000070785 EIF2B3 -332429 sc-eQTL 5.03e-01 -0.145 0.216 0.051 CD8_TCM L2
ENSG00000117408 IPO13 707343 sc-eQTL 1.98e-01 -0.261 0.202 0.051 CD8_TCM L2
ENSG00000117410 ATP6V0B 679806 sc-eQTL 7.67e-01 -0.0528 0.178 0.051 CD8_TCM L2
ENSG00000117419 ERI3 299033 sc-eQTL 8.97e-01 -0.0286 0.221 0.051 CD8_TCM L2
ENSG00000117448 AKR1A1 -896250 sc-eQTL 6.15e-01 -0.103 0.205 0.051 CD8_TCM L2
ENSG00000117450 PRDX1 -868754 sc-eQTL 9.15e-01 -0.0165 0.154 0.051 CD8_TCM L2
ENSG00000126088 UROD -356657 sc-eQTL 8.40e-01 0.0424 0.21 0.051 CD8_TCM L2
ENSG00000126091 ST3GAL3 948469 sc-eQTL 3.28e-01 0.211 0.215 0.051 CD8_TCM L2
ENSG00000126107 HECTD3 -357031 sc-eQTL 9.06e-01 -0.0263 0.222 0.051 CD8_TCM L2
ENSG00000132768 DPH2 684293 sc-eQTL 7.05e-01 -0.0809 0.213 0.051 CD8_TCM L2
ENSG00000132773 TOE1 -685759 sc-eQTL 1.97e-02 0.457 0.194 0.051 CD8_TCM L2
ENSG00000132780 NASP -929553 sc-eQTL 4.21e-01 0.137 0.17 0.051 CD8_TCM L2
ENSG00000132781 MUTYH -686600 sc-eQTL 5.23e-01 -0.145 0.226 0.051 CD8_TCM L2
ENSG00000142937 RPS8 -120958 sc-eQTL 7.38e-01 0.0373 0.111 0.051 CD8_TCM L2
ENSG00000162415 ZSWIM5 -651916 sc-eQTL 1.56e-02 0.469 0.192 0.051 CD8_TCM L2
ENSG00000173846 PLK3 -146084 sc-eQTL 7.11e-01 -0.0547 0.148 0.051 CD8_TCM L2
ENSG00000178028 DMAP1 440838 sc-eQTL 5.84e-01 -0.121 0.221 0.051 CD8_TCM L2
ENSG00000187147 RNF220 249099 sc-eQTL 9.12e-01 0.0205 0.185 0.051 CD8_TCM L2
ENSG00000198520 ARMH1 -20399 sc-eQTL 9.05e-02 0.3 0.176 0.051 CD8_TCM L2
ENSG00000070759 TESK2 -836870 sc-eQTL 3.52e-01 -0.194 0.208 0.053 CD8_TEM L2
ENSG00000070785 EIF2B3 -332429 sc-eQTL 2.73e-01 0.226 0.205 0.053 CD8_TEM L2
ENSG00000117408 IPO13 707343 sc-eQTL 1.01e-01 0.332 0.202 0.053 CD8_TEM L2
ENSG00000117410 ATP6V0B 679806 sc-eQTL 6.30e-01 0.0947 0.196 0.053 CD8_TEM L2
ENSG00000117419 ERI3 299033 sc-eQTL 9.82e-01 0.00534 0.231 0.053 CD8_TEM L2
ENSG00000117448 AKR1A1 -896250 sc-eQTL 5.52e-01 0.124 0.209 0.053 CD8_TEM L2
ENSG00000117450 PRDX1 -868754 sc-eQTL 5.96e-01 -0.098 0.184 0.053 CD8_TEM L2
ENSG00000126088 UROD -356657 sc-eQTL 8.81e-01 0.0305 0.204 0.053 CD8_TEM L2
ENSG00000126091 ST3GAL3 948469 sc-eQTL 5.02e-01 0.137 0.204 0.053 CD8_TEM L2
ENSG00000126107 HECTD3 -357031 sc-eQTL 1.34e-01 -0.315 0.21 0.053 CD8_TEM L2
ENSG00000132768 DPH2 684293 sc-eQTL 8.18e-01 -0.0481 0.208 0.053 CD8_TEM L2
ENSG00000132773 TOE1 -685759 sc-eQTL 7.16e-01 0.0752 0.206 0.053 CD8_TEM L2
ENSG00000132780 NASP -929553 sc-eQTL 3.36e-01 0.148 0.154 0.053 CD8_TEM L2
ENSG00000132781 MUTYH -686600 sc-eQTL 8.14e-02 -0.371 0.212 0.053 CD8_TEM L2
ENSG00000142937 RPS8 -120958 sc-eQTL 6.77e-01 0.051 0.122 0.053 CD8_TEM L2
ENSG00000162415 ZSWIM5 -651916 sc-eQTL 2.94e-01 0.222 0.211 0.053 CD8_TEM L2
ENSG00000173846 PLK3 -146084 sc-eQTL 1.62e-01 -0.201 0.143 0.053 CD8_TEM L2
ENSG00000178028 DMAP1 440838 sc-eQTL 9.02e-01 -0.0274 0.222 0.053 CD8_TEM L2
ENSG00000187147 RNF220 249099 sc-eQTL 8.08e-01 -0.0494 0.203 0.053 CD8_TEM L2
ENSG00000198520 ARMH1 -20399 sc-eQTL 8.31e-01 0.0414 0.194 0.053 CD8_TEM L2
ENSG00000070759 TESK2 -836870 sc-eQTL 3.23e-01 -0.196 0.198 0.051 NK_CD56bright L2
ENSG00000070785 EIF2B3 -332429 sc-eQTL 5.11e-01 0.14 0.212 0.051 NK_CD56bright L2
ENSG00000117408 IPO13 707343 sc-eQTL 8.39e-01 0.0422 0.208 0.051 NK_CD56bright L2
ENSG00000117410 ATP6V0B 679806 sc-eQTL 1.24e-01 0.318 0.206 0.051 NK_CD56bright L2
ENSG00000117411 B4GALT2 675350 sc-eQTL 1.17e-02 -0.469 0.184 0.051 NK_CD56bright L2
ENSG00000117419 ERI3 299033 sc-eQTL 7.30e-01 -0.074 0.214 0.051 NK_CD56bright L2
ENSG00000117448 AKR1A1 -896250 sc-eQTL 3.66e-01 -0.175 0.194 0.051 NK_CD56bright L2
ENSG00000117450 PRDX1 -868754 sc-eQTL 2.15e-01 -0.229 0.184 0.051 NK_CD56bright L2
ENSG00000126088 UROD -356657 sc-eQTL 8.35e-01 0.0379 0.182 0.051 NK_CD56bright L2
ENSG00000126091 ST3GAL3 948469 sc-eQTL 7.62e-01 -0.0643 0.212 0.051 NK_CD56bright L2
ENSG00000126106 TMEM53 -20188 sc-eQTL 6.20e-01 -0.101 0.203 0.051 NK_CD56bright L2
ENSG00000126107 HECTD3 -357031 sc-eQTL 2.71e-01 -0.228 0.206 0.051 NK_CD56bright L2
ENSG00000132768 DPH2 684293 sc-eQTL 3.86e-01 0.179 0.206 0.051 NK_CD56bright L2
ENSG00000132773 TOE1 -685759 sc-eQTL 7.94e-01 -0.0498 0.191 0.051 NK_CD56bright L2
ENSG00000132780 NASP -929553 sc-eQTL 4.36e-01 0.142 0.182 0.051 NK_CD56bright L2
ENSG00000132781 MUTYH -686600 sc-eQTL 1.10e-01 0.358 0.223 0.051 NK_CD56bright L2
ENSG00000142937 RPS8 -120958 sc-eQTL 3.85e-01 0.0862 0.0989 0.051 NK_CD56bright L2
ENSG00000159214 CCDC24 662934 sc-eQTL 1.46e-01 0.296 0.203 0.051 NK_CD56bright L2
ENSG00000162415 ZSWIM5 -651916 sc-eQTL 8.29e-01 0.0391 0.181 0.051 NK_CD56bright L2
ENSG00000173846 PLK3 -146084 sc-eQTL 5.17e-01 0.121 0.186 0.051 NK_CD56bright L2
ENSG00000178028 DMAP1 440838 sc-eQTL 6.20e-01 -0.11 0.221 0.051 NK_CD56bright L2
ENSG00000187147 RNF220 249099 sc-eQTL 4.55e-01 -0.137 0.184 0.051 NK_CD56bright L2
ENSG00000070759 TESK2 -836870 sc-eQTL 8.17e-01 0.0471 0.204 0.053 NK_HLA L2
ENSG00000070785 EIF2B3 -332429 sc-eQTL 5.68e-01 0.12 0.209 0.053 NK_HLA L2
ENSG00000117408 IPO13 707343 sc-eQTL 9.45e-01 -0.0136 0.197 0.053 NK_HLA L2
ENSG00000117410 ATP6V0B 679806 sc-eQTL 2.14e-01 -0.252 0.202 0.053 NK_HLA L2
ENSG00000117411 B4GALT2 675350 sc-eQTL 5.32e-01 -0.119 0.189 0.053 NK_HLA L2
ENSG00000117419 ERI3 299033 sc-eQTL 8.83e-01 0.0312 0.212 0.053 NK_HLA L2
ENSG00000117448 AKR1A1 -896250 sc-eQTL 1.34e-01 0.315 0.209 0.053 NK_HLA L2
ENSG00000117450 PRDX1 -868754 sc-eQTL 4.63e-02 0.358 0.178 0.053 NK_HLA L2
ENSG00000126088 UROD -356657 sc-eQTL 1.97e-01 -0.272 0.211 0.053 NK_HLA L2
ENSG00000126091 ST3GAL3 948469 sc-eQTL 9.36e-01 0.0168 0.21 0.053 NK_HLA L2
ENSG00000126106 TMEM53 -20188 sc-eQTL 4.84e-01 -0.141 0.2 0.053 NK_HLA L2
ENSG00000126107 HECTD3 -357031 sc-eQTL 6.66e-01 0.0965 0.224 0.053 NK_HLA L2
ENSG00000132768 DPH2 684293 sc-eQTL 4.11e-01 -0.178 0.216 0.053 NK_HLA L2
ENSG00000132773 TOE1 -685759 sc-eQTL 7.00e-01 -0.0798 0.207 0.053 NK_HLA L2
ENSG00000132780 NASP -929553 sc-eQTL 6.41e-01 0.0971 0.208 0.053 NK_HLA L2
ENSG00000132781 MUTYH -686600 sc-eQTL 6.19e-01 0.108 0.216 0.053 NK_HLA L2
ENSG00000142937 RPS8 -120958 sc-eQTL 3.06e-01 -0.0937 0.0912 0.053 NK_HLA L2
ENSG00000159214 CCDC24 662934 sc-eQTL 2.50e-01 -0.223 0.193 0.053 NK_HLA L2
ENSG00000162415 ZSWIM5 -651916 sc-eQTL 3.43e-01 0.177 0.186 0.053 NK_HLA L2
ENSG00000173846 PLK3 -146084 sc-eQTL 5.08e-01 -0.125 0.189 0.053 NK_HLA L2
ENSG00000178028 DMAP1 440838 sc-eQTL 8.01e-01 -0.0539 0.213 0.053 NK_HLA L2
ENSG00000187147 RNF220 249099 sc-eQTL 4.26e-01 -0.146 0.182 0.053 NK_HLA L2
ENSG00000070759 TESK2 -836870 sc-eQTL 7.82e-01 0.0577 0.208 0.05 Pro_T L2
ENSG00000070785 EIF2B3 -332429 sc-eQTL 7.17e-01 0.067 0.185 0.05 Pro_T L2
ENSG00000117408 IPO13 707343 sc-eQTL 5.77e-01 -0.118 0.21 0.05 Pro_T L2
ENSG00000117410 ATP6V0B 679806 sc-eQTL 5.35e-01 -0.0753 0.121 0.05 Pro_T L2
ENSG00000117411 B4GALT2 675350 sc-eQTL 5.85e-01 0.0869 0.159 0.05 Pro_T L2
ENSG00000117419 ERI3 299033 sc-eQTL 2.92e-01 -0.209 0.198 0.05 Pro_T L2
ENSG00000117448 AKR1A1 -896250 sc-eQTL 8.77e-01 -0.0216 0.14 0.05 Pro_T L2
ENSG00000117450 PRDX1 -868754 sc-eQTL 5.23e-02 -0.234 0.12 0.05 Pro_T L2
ENSG00000126088 UROD -356657 sc-eQTL 9.47e-01 0.0115 0.173 0.05 Pro_T L2
ENSG00000126091 ST3GAL3 948469 sc-eQTL 8.33e-01 -0.041 0.195 0.05 Pro_T L2
ENSG00000126106 TMEM53 -20188 sc-eQTL 3.26e-01 -0.193 0.196 0.05 Pro_T L2
ENSG00000126107 HECTD3 -357031 sc-eQTL 3.89e-01 -0.172 0.199 0.05 Pro_T L2
ENSG00000132768 DPH2 684293 sc-eQTL 8.44e-01 0.0386 0.196 0.05 Pro_T L2
ENSG00000132773 TOE1 -685759 sc-eQTL 6.10e-01 0.107 0.209 0.05 Pro_T L2
ENSG00000132780 NASP -929553 sc-eQTL 4.55e-01 -0.0794 0.106 0.05 Pro_T L2
ENSG00000132781 MUTYH -686600 sc-eQTL 2.24e-01 0.257 0.211 0.05 Pro_T L2
ENSG00000142937 RPS8 -120958 sc-eQTL 6.14e-01 0.0425 0.0842 0.05 Pro_T L2
ENSG00000142945 KIF2C -85525 sc-eQTL 4.29e-01 -0.105 0.132 0.05 Pro_T L2
ENSG00000162415 ZSWIM5 -651916 sc-eQTL 5.72e-01 0.0939 0.166 0.05 Pro_T L2
ENSG00000173846 PLK3 -146084 sc-eQTL 2.87e-01 0.191 0.179 0.05 Pro_T L2
ENSG00000178028 DMAP1 440838 sc-eQTL 4.00e-01 -0.183 0.217 0.05 Pro_T L2
ENSG00000186603 HPDL -672602 sc-eQTL 4.46e-01 0.0931 0.122 0.05 Pro_T L2
ENSG00000187147 RNF220 249099 sc-eQTL 9.30e-01 -0.0143 0.162 0.05 Pro_T L2
ENSG00000198520 ARMH1 -20399 sc-eQTL 1.43e-01 -0.202 0.138 0.05 Pro_T L2
ENSG00000280670 CCDC163 -845786 sc-eQTL 6.99e-01 0.0632 0.163 0.05 Pro_T L2
ENSG00000070759 TESK2 -836870 sc-eQTL 3.00e-01 -0.231 0.222 0.061 gdT L2
ENSG00000070785 EIF2B3 -332429 sc-eQTL 9.43e-01 -0.0165 0.233 0.061 gdT L2
ENSG00000117408 IPO13 707343 sc-eQTL 3.65e-01 -0.208 0.229 0.061 gdT L2
ENSG00000117410 ATP6V0B 679806 sc-eQTL 3.64e-02 0.433 0.205 0.061 gdT L2
ENSG00000117411 B4GALT2 675350 sc-eQTL 1.01e-01 -0.352 0.213 0.061 gdT L2
ENSG00000117419 ERI3 299033 sc-eQTL 6.45e-01 0.116 0.252 0.061 gdT L2
ENSG00000117448 AKR1A1 -896250 sc-eQTL 7.03e-01 0.0851 0.223 0.061 gdT L2
ENSG00000117450 PRDX1 -868754 sc-eQTL 6.98e-01 0.0809 0.208 0.061 gdT L2
ENSG00000126088 UROD -356657 sc-eQTL 9.66e-01 0.00914 0.213 0.061 gdT L2
ENSG00000126091 ST3GAL3 948469 sc-eQTL 9.10e-02 -0.39 0.229 0.061 gdT L2
ENSG00000126106 TMEM53 -20188 sc-eQTL 2.42e-01 -0.253 0.216 0.061 gdT L2
ENSG00000126107 HECTD3 -357031 sc-eQTL 3.10e-01 -0.251 0.246 0.061 gdT L2
ENSG00000132768 DPH2 684293 sc-eQTL 8.55e-01 -0.0416 0.228 0.061 gdT L2
ENSG00000132773 TOE1 -685759 sc-eQTL 2.00e-01 -0.279 0.216 0.061 gdT L2
ENSG00000132780 NASP -929553 sc-eQTL 1.33e-01 0.331 0.219 0.061 gdT L2
ENSG00000132781 MUTYH -686600 sc-eQTL 1.91e-01 0.302 0.23 0.061 gdT L2
ENSG00000142937 RPS8 -120958 sc-eQTL 2.82e-01 0.0982 0.0909 0.061 gdT L2
ENSG00000142945 KIF2C -85525 sc-eQTL 2.04e-01 -0.171 0.134 0.061 gdT L2
ENSG00000162415 ZSWIM5 -651916 sc-eQTL 3.34e-01 -0.205 0.212 0.061 gdT L2
ENSG00000173846 PLK3 -146084 sc-eQTL 1.11e-01 -0.245 0.153 0.061 gdT L2
ENSG00000178028 DMAP1 440838 sc-eQTL 3.94e-01 0.197 0.23 0.061 gdT L2
ENSG00000186603 HPDL -672602 sc-eQTL 1.30e-01 0.281 0.184 0.061 gdT L2
ENSG00000187147 RNF220 249099 sc-eQTL 7.62e-01 0.0581 0.191 0.061 gdT L2
ENSG00000198520 ARMH1 -20399 sc-eQTL 1.09e-01 0.333 0.207 0.061 gdT L2
ENSG00000280670 CCDC163 -845786 sc-eQTL 3.61e-02 -0.447 0.211 0.061 gdT L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000070759 TESK2 -836870 eQTL 0.0279 0.0613 0.0278 0.0 0.0 0.0726
ENSG00000126091 ST3GAL3 948469 eQTL 0.0199 -0.065 0.0279 0.0 0.0 0.0726
ENSG00000126106 TMEM53 -20188 eQTL 5.110000000000001e-21 -0.443 0.046 0.0 0.00138 0.0726
ENSG00000159214 CCDC24 662934 eQTL 0.00923 0.172 0.0659 0.0 0.0 0.0726
ENSG00000222009 BTBD19 -154189 eQTL 0.00521 0.0767 0.0274 0.0 0.0 0.0726
ENSG00000234329 AL604028.2 -997533 eQTL 0.00843 -0.122 0.0462 0.0 0.0 0.0726

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000126106 TMEM53 -20188 4.62e-05 3.98e-05 7.1e-06 1.88e-05 8.4e-06 1.91e-05 5.64e-05 7.24e-06 4.62e-05 2.2e-05 5.59e-05 2.45e-05 6.73e-05 1.84e-05 9.33e-06 2.71e-05 2.51e-05 3.49e-05 1.09e-05 9.36e-06 2.32e-05 4.76e-05 3.98e-05 1.24e-05 6.01e-05 1.29e-05 1.95e-05 1.88e-05 4.12e-05 3.16e-05 3.02e-05 2.91e-06 5.28e-06 8.56e-06 1.56e-05 7.7e-06 4.63e-06 4.48e-06 7.07e-06 4.14e-06 1.94e-06 4.56e-05 4.65e-06 5.82e-07 3.57e-06 5.28e-06 5.47e-06 2.83e-06 1.84e-06
ENSG00000142959 \N -133877 4.36e-06 5.58e-06 8.15e-07 3.39e-06 1.63e-06 1.54e-06 4.87e-06 1.11e-06 4.94e-06 2.5e-06 5.68e-06 3.37e-06 7.47e-06 2.25e-06 1.44e-06 3.89e-06 1.82e-06 3.79e-06 1.55e-06 1.44e-06 2.66e-06 4.86e-06 4.6e-06 1.55e-06 6.24e-06 2.01e-06 2.49e-06 1.73e-06 4.38e-06 3.38e-06 2.83e-06 9.88e-07 7.92e-07 1.77e-06 2.24e-06 1.14e-06 1.02e-06 5.61e-07 8.5e-07 7.61e-07 6.91e-07 5.62e-06 6.47e-07 1.88e-07 6.81e-07 6.74e-07 1.12e-06 6.81e-07 5.97e-07
ENSG00000178028 \N 440838 3.21e-07 2.56e-07 6.15e-08 2.87e-07 1.07e-07 1.54e-07 2.74e-07 6.2e-08 1.89e-07 1.05e-07 2.07e-07 1.59e-07 2.24e-07 8.07e-08 5.36e-08 1.01e-07 5.57e-08 2.21e-07 8.68e-08 7.26e-08 1.76e-07 1.9e-07 1.86e-07 5.01e-08 2.28e-07 1.94e-07 1.23e-07 1.54e-07 1.4e-07 1.24e-07 1.22e-07 6.7e-08 5.6e-08 9.58e-08 5.65e-08 4.6e-08 1.14e-07 8.33e-08 4.82e-08 5.77e-08 4.4e-08 1.68e-07 2.28e-08 2.66e-08 9.15e-08 9.65e-09 8.94e-08 2.85e-09 5.71e-08
ENSG00000222009 BTBD19 -154189 3.31e-06 4.77e-06 6.05e-07 2.61e-06 1.12e-06 1.35e-06 2.52e-06 8.89e-07 3.65e-06 1.68e-06 4.13e-06 2.72e-06 4.9e-06 1.42e-06 8.98e-07 2.43e-06 1.8e-06 2.37e-06 1.35e-06 1.02e-06 3.12e-06 3.79e-06 3.47e-06 1.71e-06 4.53e-06 1.32e-06 1.74e-06 1.69e-06 3.77e-06 2e-06 2.05e-06 5.77e-07 5.47e-07 1.28e-06 1.73e-06 8.52e-07 9.56e-07 4.24e-07 1.29e-06 4.88e-07 4.4e-07 4.58e-06 3.83e-07 1.67e-07 7.72e-07 3.96e-07 7.28e-07 5.05e-07 4.54e-07