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Genes within 1Mb (chr1:44653229:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000070759 TESK2 -837934 sc-eQTL 8.92e-01 0.0288 0.211 0.051 CD8_TCM L2
ENSG00000070785 EIF2B3 -333493 sc-eQTL 5.03e-01 -0.145 0.216 0.051 CD8_TCM L2
ENSG00000117408 IPO13 706279 sc-eQTL 1.98e-01 -0.261 0.202 0.051 CD8_TCM L2
ENSG00000117410 ATP6V0B 678742 sc-eQTL 7.67e-01 -0.0528 0.178 0.051 CD8_TCM L2
ENSG00000117419 ERI3 297969 sc-eQTL 8.97e-01 -0.0286 0.221 0.051 CD8_TCM L2
ENSG00000117448 AKR1A1 -897314 sc-eQTL 6.15e-01 -0.103 0.205 0.051 CD8_TCM L2
ENSG00000117450 PRDX1 -869818 sc-eQTL 9.15e-01 -0.0165 0.154 0.051 CD8_TCM L2
ENSG00000126088 UROD -357721 sc-eQTL 8.40e-01 0.0424 0.21 0.051 CD8_TCM L2
ENSG00000126091 ST3GAL3 947405 sc-eQTL 3.28e-01 0.211 0.215 0.051 CD8_TCM L2
ENSG00000126107 HECTD3 -358095 sc-eQTL 9.06e-01 -0.0263 0.222 0.051 CD8_TCM L2
ENSG00000132768 DPH2 683229 sc-eQTL 7.05e-01 -0.0809 0.213 0.051 CD8_TCM L2
ENSG00000132773 TOE1 -686823 sc-eQTL 1.97e-02 0.457 0.194 0.051 CD8_TCM L2
ENSG00000132780 NASP -930617 sc-eQTL 4.21e-01 0.137 0.17 0.051 CD8_TCM L2
ENSG00000132781 MUTYH -687664 sc-eQTL 5.23e-01 -0.145 0.226 0.051 CD8_TCM L2
ENSG00000142937 RPS8 -122022 sc-eQTL 7.38e-01 0.0373 0.111 0.051 CD8_TCM L2
ENSG00000162415 ZSWIM5 -652980 sc-eQTL 1.56e-02 0.469 0.192 0.051 CD8_TCM L2
ENSG00000173846 PLK3 -147148 sc-eQTL 7.11e-01 -0.0547 0.148 0.051 CD8_TCM L2
ENSG00000178028 DMAP1 439774 sc-eQTL 5.84e-01 -0.121 0.221 0.051 CD8_TCM L2
ENSG00000187147 RNF220 248035 sc-eQTL 9.12e-01 0.0205 0.185 0.051 CD8_TCM L2
ENSG00000198520 ARMH1 -21463 sc-eQTL 9.05e-02 0.3 0.176 0.051 CD8_TCM L2
ENSG00000070759 TESK2 -837934 sc-eQTL 3.52e-01 -0.194 0.208 0.053 CD8_TEM L2
ENSG00000070785 EIF2B3 -333493 sc-eQTL 2.73e-01 0.226 0.205 0.053 CD8_TEM L2
ENSG00000117408 IPO13 706279 sc-eQTL 1.01e-01 0.332 0.202 0.053 CD8_TEM L2
ENSG00000117410 ATP6V0B 678742 sc-eQTL 6.30e-01 0.0947 0.196 0.053 CD8_TEM L2
ENSG00000117419 ERI3 297969 sc-eQTL 9.82e-01 0.00534 0.231 0.053 CD8_TEM L2
ENSG00000117448 AKR1A1 -897314 sc-eQTL 5.52e-01 0.124 0.209 0.053 CD8_TEM L2
ENSG00000117450 PRDX1 -869818 sc-eQTL 5.96e-01 -0.098 0.184 0.053 CD8_TEM L2
ENSG00000126088 UROD -357721 sc-eQTL 8.81e-01 0.0305 0.204 0.053 CD8_TEM L2
ENSG00000126091 ST3GAL3 947405 sc-eQTL 5.02e-01 0.137 0.204 0.053 CD8_TEM L2
ENSG00000126107 HECTD3 -358095 sc-eQTL 1.34e-01 -0.315 0.21 0.053 CD8_TEM L2
ENSG00000132768 DPH2 683229 sc-eQTL 8.18e-01 -0.0481 0.208 0.053 CD8_TEM L2
ENSG00000132773 TOE1 -686823 sc-eQTL 7.16e-01 0.0752 0.206 0.053 CD8_TEM L2
ENSG00000132780 NASP -930617 sc-eQTL 3.36e-01 0.148 0.154 0.053 CD8_TEM L2
ENSG00000132781 MUTYH -687664 sc-eQTL 8.14e-02 -0.371 0.212 0.053 CD8_TEM L2
ENSG00000142937 RPS8 -122022 sc-eQTL 6.77e-01 0.051 0.122 0.053 CD8_TEM L2
ENSG00000162415 ZSWIM5 -652980 sc-eQTL 2.94e-01 0.222 0.211 0.053 CD8_TEM L2
ENSG00000173846 PLK3 -147148 sc-eQTL 1.62e-01 -0.201 0.143 0.053 CD8_TEM L2
ENSG00000178028 DMAP1 439774 sc-eQTL 9.02e-01 -0.0274 0.222 0.053 CD8_TEM L2
ENSG00000187147 RNF220 248035 sc-eQTL 8.08e-01 -0.0494 0.203 0.053 CD8_TEM L2
ENSG00000198520 ARMH1 -21463 sc-eQTL 8.31e-01 0.0414 0.194 0.053 CD8_TEM L2
ENSG00000070759 TESK2 -837934 sc-eQTL 3.23e-01 -0.196 0.198 0.051 NK_CD56bright L2
ENSG00000070785 EIF2B3 -333493 sc-eQTL 5.11e-01 0.14 0.212 0.051 NK_CD56bright L2
ENSG00000117408 IPO13 706279 sc-eQTL 8.39e-01 0.0422 0.208 0.051 NK_CD56bright L2
ENSG00000117410 ATP6V0B 678742 sc-eQTL 1.24e-01 0.318 0.206 0.051 NK_CD56bright L2
ENSG00000117411 B4GALT2 674286 sc-eQTL 1.17e-02 -0.469 0.184 0.051 NK_CD56bright L2
ENSG00000117419 ERI3 297969 sc-eQTL 7.30e-01 -0.074 0.214 0.051 NK_CD56bright L2
ENSG00000117448 AKR1A1 -897314 sc-eQTL 3.66e-01 -0.175 0.194 0.051 NK_CD56bright L2
ENSG00000117450 PRDX1 -869818 sc-eQTL 2.15e-01 -0.229 0.184 0.051 NK_CD56bright L2
ENSG00000126088 UROD -357721 sc-eQTL 8.35e-01 0.0379 0.182 0.051 NK_CD56bright L2
ENSG00000126091 ST3GAL3 947405 sc-eQTL 7.62e-01 -0.0643 0.212 0.051 NK_CD56bright L2
ENSG00000126106 TMEM53 -21252 sc-eQTL 6.20e-01 -0.101 0.203 0.051 NK_CD56bright L2
ENSG00000126107 HECTD3 -358095 sc-eQTL 2.71e-01 -0.228 0.206 0.051 NK_CD56bright L2
ENSG00000132768 DPH2 683229 sc-eQTL 3.86e-01 0.179 0.206 0.051 NK_CD56bright L2
ENSG00000132773 TOE1 -686823 sc-eQTL 7.94e-01 -0.0498 0.191 0.051 NK_CD56bright L2
ENSG00000132780 NASP -930617 sc-eQTL 4.36e-01 0.142 0.182 0.051 NK_CD56bright L2
ENSG00000132781 MUTYH -687664 sc-eQTL 1.10e-01 0.358 0.223 0.051 NK_CD56bright L2
ENSG00000142937 RPS8 -122022 sc-eQTL 3.85e-01 0.0862 0.0989 0.051 NK_CD56bright L2
ENSG00000159214 CCDC24 661870 sc-eQTL 1.46e-01 0.296 0.203 0.051 NK_CD56bright L2
ENSG00000162415 ZSWIM5 -652980 sc-eQTL 8.29e-01 0.0391 0.181 0.051 NK_CD56bright L2
ENSG00000173846 PLK3 -147148 sc-eQTL 5.17e-01 0.121 0.186 0.051 NK_CD56bright L2
ENSG00000178028 DMAP1 439774 sc-eQTL 6.20e-01 -0.11 0.221 0.051 NK_CD56bright L2
ENSG00000187147 RNF220 248035 sc-eQTL 4.55e-01 -0.137 0.184 0.051 NK_CD56bright L2
ENSG00000070759 TESK2 -837934 sc-eQTL 8.17e-01 0.0471 0.204 0.053 NK_HLA L2
ENSG00000070785 EIF2B3 -333493 sc-eQTL 5.68e-01 0.12 0.209 0.053 NK_HLA L2
ENSG00000117408 IPO13 706279 sc-eQTL 9.45e-01 -0.0136 0.197 0.053 NK_HLA L2
ENSG00000117410 ATP6V0B 678742 sc-eQTL 2.14e-01 -0.252 0.202 0.053 NK_HLA L2
ENSG00000117411 B4GALT2 674286 sc-eQTL 5.32e-01 -0.119 0.189 0.053 NK_HLA L2
ENSG00000117419 ERI3 297969 sc-eQTL 8.83e-01 0.0312 0.212 0.053 NK_HLA L2
ENSG00000117448 AKR1A1 -897314 sc-eQTL 1.34e-01 0.315 0.209 0.053 NK_HLA L2
ENSG00000117450 PRDX1 -869818 sc-eQTL 4.63e-02 0.358 0.178 0.053 NK_HLA L2
ENSG00000126088 UROD -357721 sc-eQTL 1.97e-01 -0.272 0.211 0.053 NK_HLA L2
ENSG00000126091 ST3GAL3 947405 sc-eQTL 9.36e-01 0.0168 0.21 0.053 NK_HLA L2
ENSG00000126106 TMEM53 -21252 sc-eQTL 4.84e-01 -0.141 0.2 0.053 NK_HLA L2
ENSG00000126107 HECTD3 -358095 sc-eQTL 6.66e-01 0.0965 0.224 0.053 NK_HLA L2
ENSG00000132768 DPH2 683229 sc-eQTL 4.11e-01 -0.178 0.216 0.053 NK_HLA L2
ENSG00000132773 TOE1 -686823 sc-eQTL 7.00e-01 -0.0798 0.207 0.053 NK_HLA L2
ENSG00000132780 NASP -930617 sc-eQTL 6.41e-01 0.0971 0.208 0.053 NK_HLA L2
ENSG00000132781 MUTYH -687664 sc-eQTL 6.19e-01 0.108 0.216 0.053 NK_HLA L2
ENSG00000142937 RPS8 -122022 sc-eQTL 3.06e-01 -0.0937 0.0912 0.053 NK_HLA L2
ENSG00000159214 CCDC24 661870 sc-eQTL 2.50e-01 -0.223 0.193 0.053 NK_HLA L2
ENSG00000162415 ZSWIM5 -652980 sc-eQTL 3.43e-01 0.177 0.186 0.053 NK_HLA L2
ENSG00000173846 PLK3 -147148 sc-eQTL 5.08e-01 -0.125 0.189 0.053 NK_HLA L2
ENSG00000178028 DMAP1 439774 sc-eQTL 8.01e-01 -0.0539 0.213 0.053 NK_HLA L2
ENSG00000187147 RNF220 248035 sc-eQTL 4.26e-01 -0.146 0.182 0.053 NK_HLA L2
ENSG00000070759 TESK2 -837934 sc-eQTL 7.82e-01 0.0577 0.208 0.05 Pro_T L2
ENSG00000070785 EIF2B3 -333493 sc-eQTL 7.17e-01 0.067 0.185 0.05 Pro_T L2
ENSG00000117408 IPO13 706279 sc-eQTL 5.77e-01 -0.118 0.21 0.05 Pro_T L2
ENSG00000117410 ATP6V0B 678742 sc-eQTL 5.35e-01 -0.0753 0.121 0.05 Pro_T L2
ENSG00000117411 B4GALT2 674286 sc-eQTL 5.85e-01 0.0869 0.159 0.05 Pro_T L2
ENSG00000117419 ERI3 297969 sc-eQTL 2.92e-01 -0.209 0.198 0.05 Pro_T L2
ENSG00000117448 AKR1A1 -897314 sc-eQTL 8.77e-01 -0.0216 0.14 0.05 Pro_T L2
ENSG00000117450 PRDX1 -869818 sc-eQTL 5.23e-02 -0.234 0.12 0.05 Pro_T L2
ENSG00000126088 UROD -357721 sc-eQTL 9.47e-01 0.0115 0.173 0.05 Pro_T L2
ENSG00000126091 ST3GAL3 947405 sc-eQTL 8.33e-01 -0.041 0.195 0.05 Pro_T L2
ENSG00000126106 TMEM53 -21252 sc-eQTL 3.26e-01 -0.193 0.196 0.05 Pro_T L2
ENSG00000126107 HECTD3 -358095 sc-eQTL 3.89e-01 -0.172 0.199 0.05 Pro_T L2
ENSG00000132768 DPH2 683229 sc-eQTL 8.44e-01 0.0386 0.196 0.05 Pro_T L2
ENSG00000132773 TOE1 -686823 sc-eQTL 6.10e-01 0.107 0.209 0.05 Pro_T L2
ENSG00000132780 NASP -930617 sc-eQTL 4.55e-01 -0.0794 0.106 0.05 Pro_T L2
ENSG00000132781 MUTYH -687664 sc-eQTL 2.24e-01 0.257 0.211 0.05 Pro_T L2
ENSG00000142937 RPS8 -122022 sc-eQTL 6.14e-01 0.0425 0.0842 0.05 Pro_T L2
ENSG00000142945 KIF2C -86589 sc-eQTL 4.29e-01 -0.105 0.132 0.05 Pro_T L2
ENSG00000162415 ZSWIM5 -652980 sc-eQTL 5.72e-01 0.0939 0.166 0.05 Pro_T L2
ENSG00000173846 PLK3 -147148 sc-eQTL 2.87e-01 0.191 0.179 0.05 Pro_T L2
ENSG00000178028 DMAP1 439774 sc-eQTL 4.00e-01 -0.183 0.217 0.05 Pro_T L2
ENSG00000186603 HPDL -673666 sc-eQTL 4.46e-01 0.0931 0.122 0.05 Pro_T L2
ENSG00000187147 RNF220 248035 sc-eQTL 9.30e-01 -0.0143 0.162 0.05 Pro_T L2
ENSG00000198520 ARMH1 -21463 sc-eQTL 1.43e-01 -0.202 0.138 0.05 Pro_T L2
ENSG00000280670 CCDC163 -846850 sc-eQTL 6.99e-01 0.0632 0.163 0.05 Pro_T L2
ENSG00000070759 TESK2 -837934 sc-eQTL 3.00e-01 -0.231 0.222 0.061 gdT L2
ENSG00000070785 EIF2B3 -333493 sc-eQTL 9.43e-01 -0.0165 0.233 0.061 gdT L2
ENSG00000117408 IPO13 706279 sc-eQTL 3.65e-01 -0.208 0.229 0.061 gdT L2
ENSG00000117410 ATP6V0B 678742 sc-eQTL 3.64e-02 0.433 0.205 0.061 gdT L2
ENSG00000117411 B4GALT2 674286 sc-eQTL 1.01e-01 -0.352 0.213 0.061 gdT L2
ENSG00000117419 ERI3 297969 sc-eQTL 6.45e-01 0.116 0.252 0.061 gdT L2
ENSG00000117448 AKR1A1 -897314 sc-eQTL 7.03e-01 0.0851 0.223 0.061 gdT L2
ENSG00000117450 PRDX1 -869818 sc-eQTL 6.98e-01 0.0809 0.208 0.061 gdT L2
ENSG00000126088 UROD -357721 sc-eQTL 9.66e-01 0.00914 0.213 0.061 gdT L2
ENSG00000126091 ST3GAL3 947405 sc-eQTL 9.10e-02 -0.39 0.229 0.061 gdT L2
ENSG00000126106 TMEM53 -21252 sc-eQTL 2.42e-01 -0.253 0.216 0.061 gdT L2
ENSG00000126107 HECTD3 -358095 sc-eQTL 3.10e-01 -0.251 0.246 0.061 gdT L2
ENSG00000132768 DPH2 683229 sc-eQTL 8.55e-01 -0.0416 0.228 0.061 gdT L2
ENSG00000132773 TOE1 -686823 sc-eQTL 2.00e-01 -0.279 0.216 0.061 gdT L2
ENSG00000132780 NASP -930617 sc-eQTL 1.33e-01 0.331 0.219 0.061 gdT L2
ENSG00000132781 MUTYH -687664 sc-eQTL 1.91e-01 0.302 0.23 0.061 gdT L2
ENSG00000142937 RPS8 -122022 sc-eQTL 2.82e-01 0.0982 0.0909 0.061 gdT L2
ENSG00000142945 KIF2C -86589 sc-eQTL 2.04e-01 -0.171 0.134 0.061 gdT L2
ENSG00000162415 ZSWIM5 -652980 sc-eQTL 3.34e-01 -0.205 0.212 0.061 gdT L2
ENSG00000173846 PLK3 -147148 sc-eQTL 1.11e-01 -0.245 0.153 0.061 gdT L2
ENSG00000178028 DMAP1 439774 sc-eQTL 3.94e-01 0.197 0.23 0.061 gdT L2
ENSG00000186603 HPDL -673666 sc-eQTL 1.30e-01 0.281 0.184 0.061 gdT L2
ENSG00000187147 RNF220 248035 sc-eQTL 7.62e-01 0.0581 0.191 0.061 gdT L2
ENSG00000198520 ARMH1 -21463 sc-eQTL 1.09e-01 0.333 0.207 0.061 gdT L2
ENSG00000280670 CCDC163 -846850 sc-eQTL 3.61e-02 -0.447 0.211 0.061 gdT L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000070759 TESK2 -837934 eQTL 0.0213 0.0645 0.028 0.0 0.0 0.0721
ENSG00000126091 ST3GAL3 947405 eQTL 0.0208 -0.0649 0.028 0.0 0.0 0.0721
ENSG00000126106 TMEM53 -21252 eQTL 5.350000000000001e-21 -0.446 0.0463 0.0 0.00147 0.0721
ENSG00000159214 CCDC24 661870 eQTL 0.00893 0.174 0.0662 0.0 0.0 0.0721
ENSG00000222009 BTBD19 -155253 eQTL 0.00547 0.0767 0.0275 0.0 0.0 0.0721
ENSG00000234329 AL604028.2 -998597 eQTL 0.00817 -0.123 0.0465 0.0 0.0 0.0721

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000126106 TMEM53 -21252 1.26e-05 1.62e-05 2.63e-06 9.17e-06 2.46e-06 6.96e-06 2.06e-05 2.53e-06 1.29e-05 7.31e-06 1.94e-05 7.55e-06 2.49e-05 4.99e-06 4.78e-06 8.62e-06 6.37e-06 1.18e-05 3.63e-06 3.93e-06 7e-06 1.27e-05 1.37e-05 4.85e-06 2.16e-05 4.9e-06 7.67e-06 6.41e-06 1.65e-05 1.31e-05 1e-05 1.08e-06 1.29e-06 4.69e-06 6.33e-06 3.8e-06 1.76e-06 2.39e-06 2.08e-06 1.65e-06 9.79e-07 1.57e-05 1.57e-06 1.97e-07 1.33e-06 2.35e-06 2.5e-06 1.3e-06 9.96e-07
ENSG00000142959 \N -134941 2.13e-06 2.49e-06 3.29e-07 2e-06 4.55e-07 7.82e-07 1.87e-06 6.48e-07 1.68e-06 9.48e-07 2.52e-06 1.43e-06 3.49e-06 1.15e-06 8.86e-07 1.19e-06 1.07e-06 1.36e-06 6.58e-07 1.43e-06 6.53e-07 2.75e-06 2.02e-06 1.01e-06 3.15e-06 1.21e-06 1.39e-06 1.44e-06 1.86e-06 1.86e-06 1.74e-06 2.65e-07 4.74e-07 1.31e-06 1.27e-06 9.47e-07 9.08e-07 4.38e-07 9.35e-07 3.45e-07 1.67e-07 2.75e-06 4.14e-07 1.32e-07 3.3e-07 3.11e-07 4.79e-07 1.99e-07 2.13e-07
ENSG00000178028 \N 439774 2.8e-07 1.7e-07 5.82e-08 2.53e-07 1.03e-07 9.05e-08 1.9e-07 5.56e-08 1.5e-07 6.75e-08 1.86e-07 1.23e-07 1.79e-07 7.95e-08 6.12e-08 7.74e-08 4.01e-08 1.33e-07 7.09e-08 6.02e-08 1.22e-07 1.31e-07 1.58e-07 3.51e-08 1.85e-07 1.25e-07 1.17e-07 1.12e-07 1.24e-07 1e-07 1.21e-07 3.99e-08 3.51e-08 9.81e-08 5.5e-08 2.74e-08 3.7e-08 9.03e-08 6.62e-08 6.31e-08 6.28e-08 1.46e-07 5.2e-08 1.25e-08 3.32e-08 1.19e-08 1.2e-07 2.02e-09 4.8e-08
ENSG00000222009 BTBD19 -155253 1.59e-06 2.45e-06 2.74e-07 1.7e-06 4.93e-07 6.48e-07 1.32e-06 4.41e-07 1.7e-06 6.94e-07 2.02e-06 1.45e-06 2.69e-06 5.79e-07 5.05e-07 9.79e-07 9.71e-07 1.14e-06 5.62e-07 1.05e-06 7.86e-07 1.94e-06 1.54e-06 9.37e-07 2.32e-06 8.55e-07 1.11e-06 1.07e-06 1.66e-06 1.46e-06 8.36e-07 2.44e-07 3.45e-07 1.09e-06 8.8e-07 6.84e-07 7.72e-07 3.82e-07 5.95e-07 3.54e-07 3.03e-07 2.13e-06 3.53e-07 9.66e-08 4.11e-07 2.93e-07 2.9e-07 2.2e-07 2.74e-07