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Genes within 1Mb (chr1:44566771:G:A):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000066135 KDM4A 916622 sc-eQTL 6.35e-01 0.107 0.226 0.056 PB L2
ENSG00000070759 TESK2 -924392 sc-eQTL 5.20e-01 0.147 0.227 0.056 PB L2
ENSG00000070785 EIF2B3 -419951 sc-eQTL 3.55e-01 0.179 0.193 0.056 PB L2
ENSG00000117408 IPO13 619821 sc-eQTL 3.13e-01 -0.248 0.245 0.056 PB L2
ENSG00000117410 ATP6V0B 592284 sc-eQTL 1.41e-01 -0.161 0.109 0.056 PB L2
ENSG00000117411 B4GALT2 587828 sc-eQTL 9.29e-01 -0.015 0.168 0.056 PB L2
ENSG00000117419 ERI3 211511 sc-eQTL 9.34e-01 -0.0196 0.236 0.056 PB L2
ENSG00000117425 PTCH2 -276482 sc-eQTL 4.02e-01 -0.187 0.222 0.056 PB L2
ENSG00000117448 AKR1A1 -983772 sc-eQTL 8.50e-01 -0.0238 0.126 0.056 PB L2
ENSG00000117450 PRDX1 -956276 sc-eQTL 1.52e-01 -0.162 0.113 0.056 PB L2
ENSG00000126088 UROD -444179 sc-eQTL 7.19e-01 -0.0613 0.17 0.056 PB L2
ENSG00000126091 ST3GAL3 860947 sc-eQTL 7.50e-01 0.0743 0.233 0.056 PB L2
ENSG00000126106 TMEM53 -107710 sc-eQTL 1.80e-01 0.304 0.225 0.056 PB L2
ENSG00000126107 HECTD3 -444553 sc-eQTL 4.73e-02 0.37 0.184 0.056 PB L2
ENSG00000132768 DPH2 596771 sc-eQTL 6.54e-01 -0.11 0.244 0.056 PB L2
ENSG00000132773 TOE1 -773281 sc-eQTL 2.55e-01 -0.275 0.24 0.056 PB L2
ENSG00000132781 MUTYH -774122 sc-eQTL 1.75e-01 -0.358 0.262 0.056 PB L2
ENSG00000142937 RPS8 -208480 sc-eQTL 9.26e-01 -0.0118 0.126 0.056 PB L2
ENSG00000159214 CCDC24 575412 sc-eQTL 3.25e-01 0.237 0.239 0.056 PB L2
ENSG00000173846 PLK3 -233606 sc-eQTL 3.10e-01 -0.236 0.232 0.056 PB L2
ENSG00000178028 DMAP1 353316 sc-eQTL 9.84e-02 0.443 0.266 0.056 PB L2
ENSG00000187147 RNF220 161577 sc-eQTL 5.87e-01 0.122 0.224 0.056 PB L2
ENSG00000198520 ARMH1 -107921 sc-eQTL 1.46e-01 -0.295 0.202 0.056 PB L2
ENSG00000280670 CCDC163 -933308 sc-eQTL 9.96e-01 0.000909 0.195 0.056 PB L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000117407 ARTN 633451 eQTL 0.0052 0.244 0.0872 0.0 0.0 0.055
ENSG00000117411 B4GALT2 587828 eQTL 0.0138 0.137 0.0555 0.0 0.0 0.055
ENSG00000117419 ERI3 211511 eQTL 0.0386 -0.0564 0.0272 0.0 0.0 0.055
ENSG00000126107 HECTD3 -444553 eQTL 0.0172 -0.0891 0.0373 0.0 0.0 0.055
ENSG00000132763 MMACHC -933529 eQTL 0.0235 0.155 0.0682 0.0 0.0 0.055
ENSG00000159214 CCDC24 575412 eQTL 4.91e-06 0.36 0.0783 0.0 0.0 0.055
ENSG00000173846 PLK3 -233606 eQTL 0.000263 -0.0928 0.0253 0.0 0.0 0.055
ENSG00000188396 TCTEX1D4 -239904 eQTL 0.000579 -0.103 0.0297 0.0 0.0 0.055
ENSG00000222009 BTBD19 -241711 eQTL 9.04e-05 -0.128 0.0327 0.0 0.0 0.055
ENSG00000281912 LINC01144 -737139 eQTL 0.00338 -0.22 0.075 0.0 0.0 0.055

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000142959 \N -221399 1.27e-06 1.01e-06 2.77e-07 1.21e-06 2.76e-07 5.91e-07 1.55e-06 3.65e-07 1.29e-06 4.03e-07 1.79e-06 6.58e-07 2.13e-06 2.87e-07 4.91e-07 7.78e-07 9.33e-07 6.45e-07 7.02e-07 6.36e-07 4.77e-07 1.27e-06 8.93e-07 6.25e-07 2.24e-06 3.79e-07 8.36e-07 7.81e-07 1.31e-06 1.25e-06 6.82e-07 1.86e-07 2.43e-07 6.08e-07 5.82e-07 4.49e-07 5.93e-07 1.9e-07 4.2e-07 3.1e-07 2.87e-07 1.55e-06 5.73e-08 1.38e-07 1.86e-07 1.22e-07 1.86e-07 4.79e-08 9.23e-08
ENSG00000159214 CCDC24 575412 3.02e-07 1.33e-07 5.49e-08 2.25e-07 1.03e-07 8.37e-08 1.9e-07 5.78e-08 1.45e-07 6.08e-08 1.67e-07 1.11e-07 1.79e-07 8.13e-08 5.72e-08 7.23e-08 4.31e-08 1.51e-07 6.92e-08 5.48e-08 1.25e-07 1.25e-07 1.58e-07 3.49e-08 1.85e-07 1.25e-07 1.12e-07 1.04e-07 1.26e-07 9.88e-08 1.07e-07 4.32e-08 3.59e-08 9.52e-08 6.78e-08 3.05e-08 4.07e-08 8.89e-08 6.5e-08 4.24e-08 6.14e-08 1.46e-07 5.21e-08 7.18e-09 3.2e-08 1.71e-08 1.2e-07 2.23e-09 4.8e-08
ENSG00000173846 PLK3 -233606 1.19e-06 9.34e-07 3e-07 1.26e-06 2.48e-07 5.88e-07 1.61e-06 3.69e-07 1.16e-06 3.66e-07 1.49e-06 5.86e-07 2.02e-06 3.07e-07 4.26e-07 6.94e-07 8.3e-07 5.47e-07 5.72e-07 6.83e-07 3.95e-07 1.17e-06 8.52e-07 6.54e-07 2.11e-06 3.06e-07 7.33e-07 6.83e-07 1.25e-06 1.23e-06 5.91e-07 1.55e-07 1.95e-07 6.86e-07 5.17e-07 4.67e-07 5.17e-07 1.69e-07 3.73e-07 2.93e-07 2.78e-07 1.53e-06 5.33e-08 1.06e-07 1.87e-07 1.22e-07 1.91e-07 3.66e-08 6.58e-08
ENSG00000222009 BTBD19 -241711 1.32e-06 9.83e-07 2.7e-07 1.14e-06 2.28e-07 5.4e-07 1.45e-06 3.44e-07 1.13e-06 3.8e-07 1.41e-06 5.64e-07 1.86e-06 2.79e-07 4.12e-07 6.22e-07 7.97e-07 5.69e-07 5.26e-07 6.8e-07 3.61e-07 1.01e-06 7.78e-07 6.51e-07 1.95e-06 3.02e-07 6.7e-07 5.8e-07 1.11e-06 1.11e-06 5.62e-07 1.29e-07 1.75e-07 6.69e-07 5.3e-07 4.69e-07 4.77e-07 1.26e-07 3.48e-07 2.45e-07 2.85e-07 1.54e-06 7.6e-08 9.66e-08 1.62e-07 9.85e-08 1.97e-07 7e-08 6.27e-08