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Genes within 1Mb (chr1:44360095:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000066135 KDM4A 709946 sc-eQTL 5.81e-01 -0.123 0.223 0.05 NK_HLA L2
ENSG00000066322 ELOVL1 992021 sc-eQTL 6.14e-01 0.107 0.212 0.05 NK_HLA L2
ENSG00000070785 EIF2B3 -626627 sc-eQTL 4.92e-01 0.149 0.216 0.05 NK_HLA L2
ENSG00000117408 IPO13 413145 sc-eQTL 8.17e-01 -0.0471 0.203 0.05 NK_HLA L2
ENSG00000117410 ATP6V0B 385608 sc-eQTL 6.07e-01 -0.108 0.21 0.05 NK_HLA L2
ENSG00000117411 B4GALT2 381152 sc-eQTL 5.10e-01 -0.129 0.195 0.05 NK_HLA L2
ENSG00000117419 ERI3 4835 sc-eQTL 3.50e-01 -0.204 0.218 0.05 NK_HLA L2
ENSG00000126088 UROD -650855 sc-eQTL 2.13e-02 0.501 0.216 0.05 NK_HLA L2
ENSG00000126091 ST3GAL3 654271 sc-eQTL 1.74e-01 0.294 0.216 0.05 NK_HLA L2
ENSG00000126106 TMEM53 -314386 sc-eQTL 4.41e-01 0.16 0.207 0.05 NK_HLA L2
ENSG00000126107 HECTD3 -651229 sc-eQTL 1.54e-01 0.329 0.23 0.05 NK_HLA L2
ENSG00000132768 DPH2 390095 sc-eQTL 5.86e-01 -0.122 0.223 0.05 NK_HLA L2
ENSG00000132773 TOE1 -979957 sc-eQTL 1.41e-01 0.314 0.213 0.05 NK_HLA L2
ENSG00000132781 MUTYH -980798 sc-eQTL 9.86e-01 0.00385 0.223 0.05 NK_HLA L2
ENSG00000142937 RPS8 -415156 sc-eQTL 6.69e-02 0.173 0.0938 0.05 NK_HLA L2
ENSG00000159214 CCDC24 368736 sc-eQTL 1.95e-01 -0.26 0.2 0.05 NK_HLA L2
ENSG00000159479 MED8 970287 sc-eQTL 5.00e-01 -0.157 0.232 0.05 NK_HLA L2
ENSG00000162415 ZSWIM5 -946114 sc-eQTL 1.43e-01 0.283 0.192 0.05 NK_HLA L2
ENSG00000173846 PLK3 -440282 sc-eQTL 6.90e-01 0.0781 0.196 0.05 NK_HLA L2
ENSG00000178028 DMAP1 146640 sc-eQTL 8.85e-01 0.0319 0.22 0.05 NK_HLA L2
ENSG00000178922 HYI 906106 sc-eQTL 7.07e-01 0.079 0.21 0.05 NK_HLA L2
ENSG00000187147 RNF220 -45099 sc-eQTL 1.50e-01 0.272 0.188 0.05 NK_HLA L2
ENSG00000198198 SZT2 970213 sc-eQTL 9.44e-01 0.0131 0.187 0.05 NK_HLA L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000066322 ELOVL1 992021 eQTL 0.0143 0.0777 0.0317 0.0 0.0 0.0667
ENSG00000117408 IPO13 413145 eQTL 1.27e-05 0.138 0.0315 0.0 0.0 0.0667
ENSG00000117410 ATP6V0B 385608 eQTL 0.002 0.0577 0.0186 0.0 0.0 0.0667
ENSG00000142949 PTPRF 834908 pQTL 0.00648 -0.138 0.0507 0.0 0.0 0.0704
ENSG00000159214 CCDC24 368736 eQTL 0.00885 0.188 0.0717 0.0 0.0 0.0667
ENSG00000178028 DMAP1 146640 eQTL 2.01e-33 -0.471 0.0376 0.0 0.0 0.0667
ENSG00000229431 AL139289.1 974982 eQTL 0.00326 0.224 0.0761 0.00228 0.0 0.0667

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000066322 ELOVL1 992021 2.74e-07 1.3e-07 5.49e-08 2.05e-07 9.87e-08 9.9e-08 1.61e-07 5.53e-08 1.45e-07 5.42e-08 1.52e-07 9e-08 1.53e-07 7.13e-08 6.18e-08 7.36e-08 4.09e-08 1.33e-07 6.75e-08 4.92e-08 1.21e-07 1.27e-07 1.44e-07 2.64e-08 1.63e-07 1.25e-07 1.1e-07 9.92e-08 1.2e-07 1.07e-07 1.02e-07 3.72e-08 3.96e-08 8.89e-08 5.64e-08 2.69e-08 4.62e-08 8.63e-08 6.43e-08 4.24e-08 5.05e-08 1.46e-07 5.21e-08 1.43e-08 2.64e-08 1.89e-08 1.19e-07 1.9e-09 5e-08
ENSG00000117408 IPO13 413145 1.22e-06 9.01e-07 2.93e-07 6.42e-07 2.19e-07 4.08e-07 9.43e-07 3.34e-07 1.08e-06 3.24e-07 1.32e-06 5.62e-07 1.73e-06 2.68e-07 4.49e-07 5.49e-07 7.96e-07 5.67e-07 5.36e-07 6.25e-07 3.07e-07 7.73e-07 6.04e-07 4.79e-07 1.92e-06 2.9e-07 6.3e-07 5.67e-07 8.47e-07 1.06e-06 5.42e-07 7.37e-08 1.76e-07 5.24e-07 4.15e-07 3.94e-07 5.22e-07 1.26e-07 2.78e-07 2.55e-07 3.02e-07 1.3e-06 6.64e-08 7.3e-08 1.62e-07 7.7e-08 1.62e-07 8.74e-08 5.63e-08
ENSG00000117410 ATP6V0B 385608 1.27e-06 9.31e-07 3.48e-07 9.83e-07 2.71e-07 4.46e-07 1.15e-06 3.49e-07 1.14e-06 3.82e-07 1.39e-06 6.02e-07 1.97e-06 2.7e-07 4.19e-07 6.94e-07 8.01e-07 5.57e-07 7.52e-07 6.79e-07 3.99e-07 1.04e-06 7.79e-07 5.91e-07 2.01e-06 3.66e-07 6.91e-07 7.26e-07 1.04e-06 1.22e-06 5.67e-07 1.59e-07 2.43e-07 6.53e-07 4.49e-07 4.66e-07 6.25e-07 1.9e-07 3.87e-07 3.03e-07 2.56e-07 1.59e-06 5.58e-08 1.06e-07 1.81e-07 1.22e-07 1.9e-07 8.93e-08 8.38e-08
ENSG00000178028 DMAP1 146640 4.48e-06 5.58e-06 7.1e-07 3.6e-06 1.64e-06 1.62e-06 5.49e-06 1.12e-06 4.9e-06 2.5e-06 6.38e-06 3.25e-06 9.47e-06 1.91e-06 1.31e-06 3.85e-06 1.97e-06 3.79e-06 1.47e-06 1.39e-06 2.88e-06 4.78e-06 4.56e-06 1.34e-06 8.28e-06 1.98e-06 2.35e-06 1.55e-06 4.46e-06 4.99e-06 2.71e-06 4.2e-07 6.5e-07 1.83e-06 1.99e-06 1.17e-06 1.02e-06 4.5e-07 9.08e-07 6.03e-07 5.68e-07 7.12e-06 4.73e-07 1.49e-07 4.39e-07 1.34e-06 8.71e-07 5.83e-07 3.41e-07