Genes within 1Mb (chr1:44232499:A:G):

View on , UCSC , GTEx , gnomAD


Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000066135 KDM4A 582350 sc-eQTL 5.37e-02 -0.459 0.236 0.052 gdT L2
ENSG00000066322 ELOVL1 864425 sc-eQTL 7.53e-01 -0.0738 0.234 0.052 gdT L2
ENSG00000070785 EIF2B3 -754223 sc-eQTL 5.79e-01 0.125 0.225 0.052 gdT L2
ENSG00000117395 EBNA1BP2 961563 sc-eQTL 1.38e-01 0.349 0.234 0.052 gdT L2
ENSG00000117399 CDC20 873518 sc-eQTL 6.38e-01 0.0749 0.159 0.052 gdT L2
ENSG00000117408 IPO13 285549 sc-eQTL 8.03e-02 -0.387 0.22 0.052 gdT L2
ENSG00000117410 ATP6V0B 258012 sc-eQTL 8.15e-01 0.0474 0.202 0.052 gdT L2
ENSG00000117411 B4GALT2 253556 sc-eQTL 3.39e-01 -0.199 0.208 0.052 gdT L2
ENSG00000117419 ERI3 -122761 sc-eQTL 8.26e-02 0.423 0.242 0.052 gdT L2
ENSG00000126088 UROD -778451 sc-eQTL 3.44e-01 -0.196 0.206 0.052 gdT L2
ENSG00000126091 ST3GAL3 526675 sc-eQTL 6.07e-01 0.116 0.224 0.052 gdT L2
ENSG00000126106 TMEM53 -441982 sc-eQTL 7.35e-01 -0.0714 0.21 0.052 gdT L2
ENSG00000126107 HECTD3 -778825 sc-eQTL 8.69e-01 0.0395 0.239 0.052 gdT L2
ENSG00000132768 DPH2 262499 sc-eQTL 4.90e-01 -0.153 0.221 0.052 gdT L2
ENSG00000142937 RPS8 -542752 sc-eQTL 6.46e-01 -0.0407 0.0885 0.052 gdT L2
ENSG00000142945 KIF2C -507319 sc-eQTL 9.86e-01 -0.00228 0.131 0.052 gdT L2
ENSG00000159479 MED8 842691 sc-eQTL 7.58e-01 0.0688 0.223 0.052 gdT L2
ENSG00000173846 PLK3 -567878 sc-eQTL 4.80e-01 0.106 0.15 0.052 gdT L2
ENSG00000178028 DMAP1 19044 sc-eQTL 2.48e-01 -0.259 0.223 0.052 gdT L2
ENSG00000178922 HYI 778510 sc-eQTL 2.10e-01 0.29 0.23 0.052 gdT L2
ENSG00000187147 RNF220 -172695 sc-eQTL 8.69e-01 0.0307 0.186 0.052 gdT L2
ENSG00000198198 SZT2 842617 sc-eQTL 9.57e-01 -0.0114 0.212 0.052 gdT L2
ENSG00000198520 ARMH1 -442193 sc-eQTL 7.98e-01 0.0519 0.203 0.052 gdT L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000117407 ARTN 299179 eQTL 0.0108 0.241 0.0942 0.0 0.0 0.0432
ENSG00000159214 CCDC24 241140 eQTL 6.83e-08 0.458 0.0841 0.0 0.0 0.0432
ENSG00000159479 MED8 842691 eQTL 0.00276 0.092 0.0306 0.0 0.0 0.0432
ENSG00000178028 DMAP1 19044 eQTL 0.0172 -0.115 0.048 0.0 0.0 0.0432


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000132768 \N 262499 1.28e-06 9.73e-07 2.77e-07 7.35e-07 2.43e-07 4.73e-07 1.18e-06 3.34e-07 1.2e-06 4.03e-07 1.48e-06 5.79e-07 2.02e-06 2.76e-07 4.28e-07 7.78e-07 8.06e-07 6.25e-07 5.54e-07 6.11e-07 4.57e-07 1.3e-06 8.26e-07 5.36e-07 2.05e-06 3.66e-07 6.16e-07 7.25e-07 1.04e-06 1.25e-06 5.88e-07 1.53e-07 1.82e-07 4.16e-07 4.2e-07 4.32e-07 3.96e-07 1.55e-07 1.46e-07 2.99e-08 1.79e-07 1.49e-06 5.66e-08 4.11e-08 1.74e-07 7.91e-08 1.76e-07 8.51e-08 8.28e-08
ENSG00000159214 CCDC24 241140 1.5e-06 1.08e-06 3.58e-07 1.11e-06 2.95e-07 6.38e-07 1.59e-06 3.46e-07 1.44e-06 4.78e-07 1.83e-06 6.45e-07 2.41e-06 2.63e-07 5.08e-07 9.17e-07 9.01e-07 7.72e-07 7.52e-07 6.76e-07 6.81e-07 1.7e-06 8.53e-07 6.51e-07 2.21e-06 4.23e-07 7.73e-07 7.19e-07 1.3e-06 1.25e-06 6.78e-07 1.9e-07 2.29e-07 5.6e-07 5.8e-07 4.37e-07 5.17e-07 1.47e-07 2.9e-07 8.93e-08 2.32e-07 1.65e-06 9.48e-08 6.41e-08 1.67e-07 1.26e-07 1.97e-07 8.8e-08 9.42e-08
ENSG00000159479 MED8 842691 2.74e-07 1.19e-07 3.71e-08 1.82e-07 9.01e-08 9.61e-08 1.42e-07 5.33e-08 1.41e-07 4.74e-08 1.6e-07 8.14e-08 1.41e-07 6.38e-08 6e-08 7.37e-08 3.94e-08 1.21e-07 5.39e-08 4.07e-08 1.13e-07 1.23e-07 1.32e-07 3.79e-08 1.37e-07 1.14e-07 1.11e-07 9.57e-08 1.05e-07 1.1e-07 9.64e-08 3.66e-08 3.3e-08 8.49e-08 8.82e-08 3.94e-08 5.03e-08 9.65e-08 7.47e-08 3.55e-08 4.63e-08 1.33e-07 5.08e-08 1.13e-08 5.19e-08 1.83e-08 1.24e-07 3.86e-09 4.88e-08