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Genes within 1Mb (chr1:44195105:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000066135 KDM4A 544956 sc-eQTL 5.37e-02 -0.459 0.236 0.052 gdT L2
ENSG00000066322 ELOVL1 827031 sc-eQTL 7.53e-01 -0.0738 0.234 0.052 gdT L2
ENSG00000070785 EIF2B3 -791617 sc-eQTL 5.79e-01 0.125 0.225 0.052 gdT L2
ENSG00000117395 EBNA1BP2 924169 sc-eQTL 1.38e-01 0.349 0.234 0.052 gdT L2
ENSG00000117399 CDC20 836124 sc-eQTL 6.38e-01 0.0749 0.159 0.052 gdT L2
ENSG00000117408 IPO13 248155 sc-eQTL 8.03e-02 -0.387 0.22 0.052 gdT L2
ENSG00000117410 ATP6V0B 220618 sc-eQTL 8.15e-01 0.0474 0.202 0.052 gdT L2
ENSG00000117411 B4GALT2 216162 sc-eQTL 3.39e-01 -0.199 0.208 0.052 gdT L2
ENSG00000117419 ERI3 -160155 sc-eQTL 8.26e-02 0.423 0.242 0.052 gdT L2
ENSG00000126088 UROD -815845 sc-eQTL 3.44e-01 -0.196 0.206 0.052 gdT L2
ENSG00000126091 ST3GAL3 489281 sc-eQTL 6.07e-01 0.116 0.224 0.052 gdT L2
ENSG00000126106 TMEM53 -479376 sc-eQTL 7.35e-01 -0.0714 0.21 0.052 gdT L2
ENSG00000126107 HECTD3 -816219 sc-eQTL 8.69e-01 0.0395 0.239 0.052 gdT L2
ENSG00000132768 DPH2 225105 sc-eQTL 4.90e-01 -0.153 0.221 0.052 gdT L2
ENSG00000142937 RPS8 -580146 sc-eQTL 6.46e-01 -0.0407 0.0885 0.052 gdT L2
ENSG00000142945 KIF2C -544713 sc-eQTL 9.86e-01 -0.00228 0.131 0.052 gdT L2
ENSG00000159479 MED8 805297 sc-eQTL 7.58e-01 0.0688 0.223 0.052 gdT L2
ENSG00000173846 PLK3 -605272 sc-eQTL 4.80e-01 0.106 0.15 0.052 gdT L2
ENSG00000178028 DMAP1 -18350 sc-eQTL 2.48e-01 -0.259 0.223 0.052 gdT L2
ENSG00000178922 HYI 741116 sc-eQTL 2.10e-01 0.29 0.23 0.052 gdT L2
ENSG00000187147 RNF220 -210089 sc-eQTL 8.69e-01 0.0307 0.186 0.052 gdT L2
ENSG00000198198 SZT2 805223 sc-eQTL 9.57e-01 -0.0114 0.212 0.052 gdT L2
ENSG00000198520 ARMH1 -479587 sc-eQTL 7.98e-01 0.0519 0.203 0.052 gdT L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000117407 ARTN 261785 eQTL 0.0133 0.235 0.0949 0.0 0.0 0.0437
ENSG00000126088 UROD -815845 pQTL 0.0422 0.0731 0.036 0.0 0.0 0.043
ENSG00000159214 CCDC24 203746 eQTL 2.22e-08 0.478 0.0847 0.0 0.0 0.0437
ENSG00000159479 MED8 805297 eQTL 0.00253 0.0934 0.0309 0.0 0.0 0.0437
ENSG00000178028 DMAP1 -18350 eQTL 0.0109 -0.123 0.0483 0.0 0.0 0.0437

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000132768 \N 225105 1.93e-06 2.16e-06 2.31e-07 1.27e-06 4.65e-07 6.74e-07 1.3e-06 5.89e-07 1.69e-06 7.65e-07 1.84e-06 1.32e-06 2.84e-06 6.9e-07 4.97e-07 1.23e-06 1.07e-06 1.44e-06 6.59e-07 9.31e-07 7.87e-07 1.92e-06 1.68e-06 9.4e-07 2.55e-06 1.22e-06 1.15e-06 1.26e-06 1.71e-06 1.62e-06 7.64e-07 2.62e-07 4.32e-07 1e-06 9.17e-07 7.02e-07 7.53e-07 3.84e-07 6.98e-07 3.35e-07 1.96e-07 2.43e-06 4.33e-07 1.91e-07 2.81e-07 2.95e-07 4.32e-07 2.62e-07 1.98e-07
ENSG00000159214 CCDC24 203746 2.28e-06 2.46e-06 3.2e-07 1.64e-06 6.17e-07 7.89e-07 1.52e-06 6.87e-07 1.82e-06 8.55e-07 2.1e-06 1.29e-06 3.42e-06 1.1e-06 8.13e-07 1.51e-06 9.77e-07 2.18e-06 9.83e-07 1.27e-06 1.14e-06 2.75e-06 2.13e-06 1.06e-06 3.08e-06 1.35e-06 1.34e-06 1.54e-06 1.95e-06 1.81e-06 1.21e-06 3.05e-07 5.85e-07 1.21e-06 9.93e-07 9.66e-07 8.03e-07 4.12e-07 1.07e-06 3.98e-07 2.08e-07 2.84e-06 4.37e-07 1.98e-07 3.69e-07 3.32e-07 7.4e-07 2.41e-07 1.56e-07
ENSG00000159479 MED8 805297 3.02e-07 1.42e-07 6.15e-08 2.05e-07 1.02e-07 8.21e-08 1.9e-07 5.56e-08 1.59e-07 7.6e-08 1.63e-07 1.2e-07 1.95e-07 7.95e-08 5.43e-08 8.08e-08 4.18e-08 1.72e-07 7.09e-08 5.33e-08 1.22e-07 1.42e-07 1.62e-07 3.49e-08 1.85e-07 1.31e-07 1.19e-07 1.12e-07 1.31e-07 1.06e-07 1.09e-07 3.6e-08 3.38e-08 9.76e-08 3.12e-08 2.68e-08 5.58e-08 8.37e-08 6.42e-08 5.45e-08 6.14e-08 1.5e-07 4.87e-08 7.61e-09 3.36e-08 1.71e-08 8.74e-08 1.92e-09 4.85e-08