Genes within 1Mb (chr1:44073457:C:T):

View on , UCSC , GTEx , gnomAD


Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000066135 KDM4A 423308 sc-eQTL 7.67e-01 0.0731 0.247 0.055 gdT L2
ENSG00000066322 ELOVL1 705383 sc-eQTL 5.10e-01 0.16 0.242 0.055 gdT L2
ENSG00000070785 EIF2B3 -913265 sc-eQTL 6.47e-01 -0.107 0.233 0.055 gdT L2
ENSG00000117395 EBNA1BP2 802521 sc-eQTL 9.36e-01 0.0197 0.243 0.055 gdT L2
ENSG00000117399 CDC20 714476 sc-eQTL 7.06e-01 0.062 0.164 0.055 gdT L2
ENSG00000117408 IPO13 126507 sc-eQTL 1.09e-03 0.737 0.221 0.055 gdT L2
ENSG00000117410 ATP6V0B 98970 sc-eQTL 2.72e-01 -0.229 0.208 0.055 gdT L2
ENSG00000117411 B4GALT2 94514 sc-eQTL 7.79e-01 -0.0604 0.215 0.055 gdT L2
ENSG00000117419 ERI3 -281803 sc-eQTL 9.93e-01 0.00228 0.253 0.055 gdT L2
ENSG00000126088 UROD -937493 sc-eQTL 7.23e-01 -0.0757 0.213 0.055 gdT L2
ENSG00000126091 ST3GAL3 367633 sc-eQTL 1.25e-01 -0.355 0.23 0.055 gdT L2
ENSG00000126106 TMEM53 -601024 sc-eQTL 3.12e-01 -0.219 0.216 0.055 gdT L2
ENSG00000126107 HECTD3 -937867 sc-eQTL 9.65e-01 0.0109 0.247 0.055 gdT L2
ENSG00000132768 DPH2 103457 sc-eQTL 8.88e-01 0.0321 0.228 0.055 gdT L2
ENSG00000142937 RPS8 -701794 sc-eQTL 3.99e-01 -0.0772 0.0912 0.055 gdT L2
ENSG00000142945 KIF2C -666361 sc-eQTL 3.24e-01 -0.133 0.135 0.055 gdT L2
ENSG00000159479 MED8 683649 sc-eQTL 3.60e-01 -0.211 0.23 0.055 gdT L2
ENSG00000173846 PLK3 -726920 sc-eQTL 6.18e-01 0.0774 0.155 0.055 gdT L2
ENSG00000178028 DMAP1 -139998 sc-eQTL 1.02e-01 0.377 0.229 0.055 gdT L2
ENSG00000178922 HYI 619468 sc-eQTL 5.11e-01 0.157 0.239 0.055 gdT L2
ENSG00000187147 RNF220 -331737 sc-eQTL 1.37e-01 0.285 0.19 0.055 gdT L2
ENSG00000198198 SZT2 683575 sc-eQTL 8.78e-01 -0.0335 0.219 0.055 gdT L2
ENSG00000198520 ARMH1 -601235 sc-eQTL 2.55e-01 0.238 0.208 0.055 gdT L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000159214 CCDC24 82098 eQTL 3.34e-07 -0.459 0.0892 0.0 0.0 0.0378
ENSG00000178028 DMAP1 -139998 eQTL 8.13e-05 0.2 0.0505 0.0 0.0 0.0378


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000066056 \N 772475 2.8e-07 1.42e-07 5.14e-08 2.07e-07 9.87e-08 8.21e-08 1.67e-07 5.43e-08 1.45e-07 6.4e-08 1.57e-07 1.05e-07 1.69e-07 7.64e-08 6.18e-08 7.5e-08 4.01e-08 1.44e-07 6.32e-08 4.8e-08 1.25e-07 1.25e-07 1.5e-07 2.91e-08 1.65e-07 1.25e-07 1.18e-07 1.04e-07 1.2e-07 9.88e-08 1.06e-07 3.54e-08 3.96e-08 8.72e-08 3.07e-08 3.04e-08 5.74e-08 8.51e-08 6.71e-08 3.67e-08 5.44e-08 1.46e-07 5.21e-08 1.11e-08 3.42e-08 1.68e-08 1e-07 1.9e-09 5.01e-08
ENSG00000159214 CCDC24 82098 6.16e-06 8.28e-06 6.5e-07 3.85e-06 1.71e-06 2.81e-06 8.88e-06 1.19e-06 4.79e-06 3.49e-06 8.62e-06 3.63e-06 1.02e-05 3.14e-06 1.37e-06 4.63e-06 2.94e-06 3.78e-06 1.65e-06 1.7e-06 2.92e-06 7.2e-06 5.31e-06 1.99e-06 9.69e-06 2.34e-06 3.51e-06 2.2e-06 6.45e-06 6.77e-06 3.36e-06 4.73e-07 7.9e-07 2.54e-06 2.59e-06 1.61e-06 1.12e-06 8.97e-07 9.82e-07 7.37e-07 8.4e-07 8.25e-06 6.89e-07 1.59e-07 8.28e-07 1.01e-06 9.55e-07 6.92e-07 5.83e-07
ENSG00000178028 DMAP1 -139998 4.35e-06 4.67e-06 6.05e-07 2.46e-06 8.67e-07 1.29e-06 2.77e-06 1.03e-06 3.03e-06 1.83e-06 4.13e-06 2.72e-06 6.2e-06 1.74e-06 1.2e-06 2.28e-06 1.79e-06 2.38e-06 1.47e-06 1.05e-06 1.96e-06 3.98e-06 3.45e-06 1.82e-06 4.97e-06 1.16e-06 2e-06 1.44e-06 3.81e-06 3.27e-06 2.01e-06 4.72e-07 5.48e-07 1.83e-06 2.04e-06 8.84e-07 9.08e-07 4.73e-07 1.31e-06 3.64e-07 3.05e-07 5.01e-06 4.6e-07 1.86e-07 3.34e-07 3.93e-07 7.12e-07 2.4e-07 1.77e-07