Genes within 1Mb (chr1:44072001:C:T):

View on , UCSC , GTEx , gnomAD


Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000066135 KDM4A 421852 sc-eQTL 7.67e-01 0.0731 0.247 0.055 gdT L2
ENSG00000066322 ELOVL1 703927 sc-eQTL 5.10e-01 0.16 0.242 0.055 gdT L2
ENSG00000070785 EIF2B3 -914721 sc-eQTL 6.47e-01 -0.107 0.233 0.055 gdT L2
ENSG00000117395 EBNA1BP2 801065 sc-eQTL 9.36e-01 0.0197 0.243 0.055 gdT L2
ENSG00000117399 CDC20 713020 sc-eQTL 7.06e-01 0.062 0.164 0.055 gdT L2
ENSG00000117408 IPO13 125051 sc-eQTL 1.09e-03 0.737 0.221 0.055 gdT L2
ENSG00000117410 ATP6V0B 97514 sc-eQTL 2.72e-01 -0.229 0.208 0.055 gdT L2
ENSG00000117411 B4GALT2 93058 sc-eQTL 7.79e-01 -0.0604 0.215 0.055 gdT L2
ENSG00000117419 ERI3 -283259 sc-eQTL 9.93e-01 0.00228 0.253 0.055 gdT L2
ENSG00000126088 UROD -938949 sc-eQTL 7.23e-01 -0.0757 0.213 0.055 gdT L2
ENSG00000126091 ST3GAL3 366177 sc-eQTL 1.25e-01 -0.355 0.23 0.055 gdT L2
ENSG00000126106 TMEM53 -602480 sc-eQTL 3.12e-01 -0.219 0.216 0.055 gdT L2
ENSG00000126107 HECTD3 -939323 sc-eQTL 9.65e-01 0.0109 0.247 0.055 gdT L2
ENSG00000132768 DPH2 102001 sc-eQTL 8.88e-01 0.0321 0.228 0.055 gdT L2
ENSG00000142937 RPS8 -703250 sc-eQTL 3.99e-01 -0.0772 0.0912 0.055 gdT L2
ENSG00000142945 KIF2C -667817 sc-eQTL 3.24e-01 -0.133 0.135 0.055 gdT L2
ENSG00000159479 MED8 682193 sc-eQTL 3.60e-01 -0.211 0.23 0.055 gdT L2
ENSG00000173846 PLK3 -728376 sc-eQTL 6.18e-01 0.0774 0.155 0.055 gdT L2
ENSG00000178028 DMAP1 -141454 sc-eQTL 1.02e-01 0.377 0.229 0.055 gdT L2
ENSG00000178922 HYI 618012 sc-eQTL 5.11e-01 0.157 0.239 0.055 gdT L2
ENSG00000187147 RNF220 -333193 sc-eQTL 1.37e-01 0.285 0.19 0.055 gdT L2
ENSG00000198198 SZT2 682119 sc-eQTL 8.78e-01 -0.0335 0.219 0.055 gdT L2
ENSG00000198520 ARMH1 -602691 sc-eQTL 2.55e-01 0.238 0.208 0.055 gdT L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000159214 CCDC24 80642 eQTL 3.27e-07 -0.46 0.0894 0.0 0.0 0.0378
ENSG00000178028 DMAP1 -141454 eQTL 7.87e-05 0.201 0.0506 0.0 0.0 0.0378


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000066056 \N 771019 2.91e-07 1.56e-07 5.72e-08 2.27e-07 9.79e-08 8.37e-08 2.16e-07 5.82e-08 1.44e-07 8.53e-08 1.69e-07 1.22e-07 2.24e-07 8.07e-08 6.2e-08 7.97e-08 4.35e-08 1.77e-07 7.16e-08 6.16e-08 1.22e-07 1.47e-07 1.64e-07 3.4e-08 2.17e-07 1.31e-07 1.19e-07 1.12e-07 1.31e-07 1.17e-07 1.26e-07 3.6e-08 3.74e-08 9.78e-08 4.04e-08 3.11e-08 5.67e-08 9.17e-08 6.5e-08 5.24e-08 5.54e-08 1.59e-07 3.55e-08 7.72e-09 3.2e-08 6.68e-09 9.29e-08 2.2e-09 4.83e-08
ENSG00000159214 CCDC24 80642 6.3e-06 9.51e-06 7.06e-07 4.02e-06 1.62e-06 2.47e-06 9.67e-06 1.46e-06 6.53e-06 4.06e-06 1.06e-05 3.25e-06 1.2e-05 3.14e-06 1.46e-06 4.5e-06 3.63e-06 3.79e-06 1.66e-06 2.15e-06 2.8e-06 7.69e-06 6.05e-06 2e-06 9.99e-06 2.35e-06 3.51e-06 2.36e-06 7.04e-06 7.35e-06 4.58e-06 4.16e-07 7.24e-07 2.07e-06 2.59e-06 1.22e-06 1.04e-06 5.43e-07 8.75e-07 7.43e-07 3.75e-07 9.36e-06 7.18e-07 1.84e-07 5.92e-07 1.05e-06 9.76e-07 7.05e-07 5.83e-07
ENSG00000178028 DMAP1 -141454 4.33e-06 5.22e-06 6.95e-07 2.73e-06 7.24e-07 1.35e-06 4.6e-06 9.6e-07 5.13e-06 2.22e-06 5.99e-06 3.43e-06 7.56e-06 2.35e-06 1.47e-06 2.43e-06 2.09e-06 2.88e-06 1.42e-06 1e-06 2.12e-06 4.53e-06 3.8e-06 1.81e-06 5.37e-06 1.52e-06 2.53e-06 1.84e-06 4.26e-06 4.12e-06 2.83e-06 4.56e-07 8.14e-07 1.68e-06 2.23e-06 9.05e-07 9.22e-07 4.72e-07 1.3e-06 3.45e-07 3.05e-07 5.71e-06 3.81e-07 1.9e-07 3.13e-07 3.75e-07 8.11e-07 2.4e-07 3.52e-07