Genes within 1Mb (chr1:44021608:T:C):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000066135 KDM4A 371459 eQTL 4.50e-02 0.0463 0.0231 0.0 0.0 0.116
ENSG00000117408 IPO13 74658 eQTL 1.16e-02 0.059 0.0233 0.0 0.0 0.116
ENSG00000117410 ATP6V0B 47121 eQTL 6.59e-04 0.0468 0.0137 0.0 0.0 0.116
ENSG00000117411 B4GALT2 42665 eQTL 3.52e-04 0.133 0.037 0.0 0.0 0.116
ENSG00000132768 DPH2 51608 eQTL 5.72e-03 0.0526 0.019 0.0 0.0 0.116
ENSG00000142949 PTPRF 496421 eQTL 5.33e-03 -0.115 0.041 0.0 0.0 0.116
ENSG00000159214 CCDC24 30249 eQTL 3.54e-12 0.364 0.0516 0.0 0.0 0.116
ENSG00000159479 MED8 631800 eQTL 2.34e-02 0.0432 0.019 0.0 0.0 0.116
ENSG00000188396 TCTEX1D4 -785067 eQTL 1.34e-02 -0.0494 0.0199 0.0 0.0 0.116
ENSG00000198198 SZT2 631726 eQTL 2.85e-02 0.0385 0.0176 0.00125 0.0 0.116
ENSG00000222009 BTBD19 -786874 eQTL 1.56e-04 -0.083 0.0219 0.0 0.0 0.116


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000066322 \N 653534 3.02e-07 1.59e-07 6.04e-08 2.26e-07 9.82e-08 8.33e-08 2.1e-07 5.62e-08 1.71e-07 8.53e-08 1.66e-07 1.31e-07 2.24e-07 8.07e-08 5.69e-08 8.71e-08 4.18e-08 1.72e-07 7.12e-08 5.75e-08 1.22e-07 1.47e-07 1.62e-07 3.4e-08 2.09e-07 1.31e-07 1.2e-07 1.36e-07 1.31e-07 9.88e-08 1.21e-07 4.77e-08 3.38e-08 9.52e-08 3.57e-08 2.74e-08 4.07e-08 8.37e-08 6.39e-08 5.45e-08 5.03e-08 1.59e-07 5.27e-08 1.44e-08 3.07e-08 8.31e-09 8.74e-08 1.95e-09 4.82e-08
ENSG00000117410 ATP6V0B 47121 1.15e-05 1.3e-05 2.57e-06 8.36e-06 2.4e-06 5.91e-06 1.68e-05 2.74e-06 1.37e-05 6.68e-06 1.74e-05 6.86e-06 2.21e-05 4.49e-06 4.18e-06 9.06e-06 6.49e-06 1.11e-05 3.6e-06 3.49e-06 6.88e-06 1.26e-05 1.23e-05 4.28e-06 2.27e-05 4.86e-06 7.58e-06 5.86e-06 1.45e-05 1.06e-05 8.68e-06 9.73e-07 1.23e-06 3.93e-06 6.02e-06 2.88e-06 1.77e-06 2.16e-06 2.22e-06 1.45e-06 1.44e-06 1.68e-05 1.68e-06 3.05e-07 1.09e-06 2.34e-06 2.47e-06 8.94e-07 8.01e-07
ENSG00000117411 B4GALT2 42665 1.27e-05 1.45e-05 2.47e-06 9.17e-06 2.45e-06 6.28e-06 1.95e-05 3.09e-06 1.51e-05 7.65e-06 1.86e-05 7.33e-06 2.44e-05 5.15e-06 4.5e-06 9.28e-06 7.09e-06 1.18e-05 3.79e-06 3.93e-06 7.26e-06 1.4e-05 1.37e-05 4.74e-06 2.44e-05 5.18e-06 7.96e-06 6.54e-06 1.59e-05 1.18e-05 1.01e-05 1.14e-06 1.43e-06 4.04e-06 6.48e-06 3.35e-06 1.72e-06 2.4e-06 2.59e-06 1.88e-06 1.59e-06 1.8e-05 2.15e-06 3.57e-07 1.44e-06 2.49e-06 2.8e-06 9.83e-07 1.01e-06
ENSG00000132768 DPH2 51608 1.07e-05 1.27e-05 2.31e-06 7.73e-06 2.34e-06 5.49e-06 1.44e-05 2.48e-06 1.2e-05 6.11e-06 1.58e-05 6.68e-06 1.93e-05 4.2e-06 3.8e-06 8.18e-06 5.65e-06 9.78e-06 3.29e-06 3.14e-06 6.62e-06 1.2e-05 1.08e-05 3.81e-06 2.05e-05 4.53e-06 7.41e-06 5.28e-06 1.37e-05 9.37e-06 7.69e-06 1.06e-06 1.2e-06 3.64e-06 5.63e-06 2.8e-06 1.79e-06 2.06e-06 2.08e-06 1.26e-06 1.21e-06 1.53e-05 1.61e-06 2.85e-07 9.58e-07 2.2e-06 2.08e-06 7.41e-07 6.37e-07
ENSG00000142949 PTPRF 496421 5.37e-07 3.47e-07 7.72e-08 2.96e-07 1.11e-07 1.26e-07 3.94e-07 8.11e-08 2.75e-07 1.5e-07 3.66e-07 2.49e-07 4.74e-07 9.48e-08 1.24e-07 1.63e-07 9.3e-08 2.9e-07 9.19e-08 8.11e-08 1.52e-07 2.48e-07 2.26e-07 6.65e-08 4.54e-07 2.01e-07 1.83e-07 2.13e-07 2.03e-07 1.8e-07 1.93e-07 7.4e-08 4.93e-08 1.02e-07 1.69e-07 5.14e-08 8.75e-08 5.36e-08 5.25e-08 7.55e-08 8.15e-08 2.9e-07 3.65e-08 2.09e-08 7.26e-08 1.3e-08 9.19e-08 0.0 4.59e-08
ENSG00000159214 CCDC24 30249 1.63e-05 2.03e-05 3.79e-06 1.21e-05 3.42e-06 9.05e-06 2.59e-05 3.72e-06 1.94e-05 1.02e-05 2.45e-05 9.57e-06 3.3e-05 7.67e-06 5.31e-06 1.15e-05 9.13e-06 1.66e-05 5.69e-06 4.92e-06 9.48e-06 2.06e-05 1.93e-05 6.4e-06 3.04e-05 5.78e-06 9.29e-06 8.54e-06 2.1e-05 1.61e-05 1.29e-05 1.58e-06 1.81e-06 5.59e-06 8.71e-06 4.4e-06 2.34e-06 2.74e-06 3.46e-06 2.66e-06 1.7e-06 2.39e-05 2.64e-06 3.84e-07 1.92e-06 2.87e-06 3.43e-06 1.52e-06 1.36e-06
ENSG00000178922 \N 567619 3.62e-07 2.4e-07 6.86e-08 2.49e-07 1.1e-07 9.31e-08 2.86e-07 5.84e-08 2.01e-07 1.11e-07 2.18e-07 1.72e-07 3.18e-07 8.54e-08 7.35e-08 1.1e-07 5.57e-08 2.21e-07 7.42e-08 8.52e-08 1.27e-07 1.98e-07 1.73e-07 4.15e-08 2.86e-07 1.71e-07 1.33e-07 1.68e-07 1.4e-07 1.17e-07 1.43e-07 5.3e-08 4.34e-08 9.72e-08 6.87e-08 3.43e-08 5.62e-08 7.92e-08 5.59e-08 7.65e-08 3.46e-08 1.79e-07 3.99e-08 7.28e-09 3.66e-08 1.01e-08 7.13e-08 2.2e-09 4.72e-08