Genes within 1Mb (chr1:43979995:T:C):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000117407 ARTN 46675 eQTL 4.19e-11 0.354 0.053 0.0 0.0 0.151
ENSG00000117408 IPO13 33045 eQTL 5.65e-04 -0.0745 0.0215 0.0 0.0 0.151
ENSG00000117410 ATP6V0B 5508 eQTL 5.03e-28 -0.136 0.012 0.0 0.0 0.151
ENSG00000126091 ST3GAL3 274171 eQTL 3.79e-02 0.043 0.0207 0.0 0.0 0.151
ENSG00000132768 DPH2 9995 eQTL 3.28e-03 0.0518 0.0176 0.00116 0.0 0.151
ENSG00000142949 PTPRF 454808 eQTL 1.76e-03 0.119 0.038 0.00154 0.0 0.151
ENSG00000159214 CCDC24 -11364 eQTL 3.55e-19 0.43 0.047 0.173 0.116 0.151
ENSG00000178922 HYI 526006 eQTL 9.54e-02 0.0474 0.0284 0.00114 0.0 0.151
ENSG00000187147 RNF220 -425199 eQTL 4.39e-02 0.0317 0.0157 0.0 0.0 0.151
ENSG00000222009 BTBD19 -828487 eQTL 1.68e-02 -0.0487 0.0203 0.0 0.0 0.151
ENSG00000229431 AL139289.1 594882 eQTL 4.70e-02 -0.103 0.052 0.0 0.0 0.151
ENSG00000236200 KDM4A-AS1 271857 eQTL 1.23e-02 0.132 0.0527 0.0 0.0 0.151


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000117407 ARTN 46675 2.02e-05 2.95e-05 2.95e-06 1.38e-05 3.53e-06 1.01e-05 3.03e-05 3.82e-06 2.47e-05 9.88e-06 3.02e-05 1.25e-05 3.72e-05 1.07e-05 5.22e-06 1.18e-05 1.19e-05 1.84e-05 4.95e-06 5.17e-06 9.08e-06 2.22e-05 2.15e-05 5.19e-06 3.25e-05 5.57e-06 1.05e-05 9.23e-06 2.12e-05 1.68e-05 1.34e-05 1.61e-06 1.71e-06 5.21e-06 9.74e-06 4.14e-06 2.04e-06 2.87e-06 3.34e-06 3.24e-06 1.63e-06 2.55e-05 2.88e-06 3.62e-07 1.93e-06 2.87e-06 3.02e-06 1.52e-06 1.23e-06
ENSG00000117408 IPO13 33045 2.39e-05 3.04e-05 3.38e-06 1.45e-05 3.92e-06 1.15e-05 3.41e-05 4.18e-06 2.7e-05 1.11e-05 3.26e-05 1.39e-05 4.02e-05 1.17e-05 5.37e-06 1.33e-05 1.34e-05 2.03e-05 5.69e-06 5.38e-06 9.81e-06 2.44e-05 2.41e-05 5.86e-06 3.43e-05 5.73e-06 1.14e-05 1.02e-05 2.36e-05 1.81e-05 1.5e-05 1.55e-06 2e-06 5.67e-06 1.01e-05 4.57e-06 2.4e-06 2.96e-06 3.63e-06 3.3e-06 1.63e-06 2.84e-05 3.13e-06 3.6e-07 1.97e-06 2.98e-06 3.43e-06 1.49e-06 1.32e-06
ENSG00000117410 ATP6V0B 5508 4.85e-05 3.76e-05 6.44e-06 1.61e-05 6.29e-06 1.65e-05 4.97e-05 5.07e-06 3.63e-05 1.66e-05 4.33e-05 1.95e-05 5.36e-05 1.57e-05 7.32e-06 2.32e-05 2.01e-05 2.89e-05 8.54e-06 7.09e-06 1.71e-05 3.96e-05 3.6e-05 9.82e-06 4.95e-05 8.74e-06 1.65e-05 1.43e-05 3.6e-05 2.73e-05 2.26e-05 1.64e-06 2.83e-06 7.33e-06 1.27e-05 6.12e-06 3.19e-06 3.21e-06 4.95e-06 3.57e-06 1.74e-06 4.33e-05 4.52e-06 3.55e-07 2.71e-06 4.28e-06 4.33e-06 1.69e-06 1.52e-06
ENSG00000117419 \N -375265 1.47e-06 1.25e-06 2.29e-07 1.88e-06 4.51e-07 6.45e-07 1.53e-06 2.66e-07 1.45e-06 4.66e-07 1.5e-06 5.86e-07 2.38e-06 3.26e-07 7.19e-07 7.41e-07 9.73e-07 7.08e-07 8.41e-07 1.15e-06 7.95e-07 1.63e-06 1.5e-06 5.39e-07 2.49e-06 4.36e-07 1.05e-06 8.48e-07 1.65e-06 1.22e-06 8.1e-07 4.56e-07 1.88e-07 6.16e-07 1.02e-06 5.24e-07 8.6e-07 3.46e-07 4.1e-07 2.44e-07 4.51e-07 1.65e-06 3.01e-07 7.3e-08 4.33e-07 3.14e-07 2.3e-07 2.42e-07 3.12e-07
ENSG00000126091 ST3GAL3 274171 3.58e-06 2.63e-06 5.1e-07 2.43e-06 6.67e-07 8.44e-07 1.65e-06 4.04e-07 1.79e-06 7.18e-07 1.99e-06 1.49e-06 3.5e-06 1.36e-06 1.35e-06 1.06e-06 1.79e-06 1.73e-06 7.34e-07 9.52e-07 9.86e-07 2.51e-06 3.01e-06 6.61e-07 3.57e-06 1.1e-06 1.46e-06 1.75e-06 2.64e-06 1.79e-06 1.94e-06 4.59e-07 4.47e-07 1.1e-06 2.08e-06 8.92e-07 9.21e-07 4.37e-07 6.93e-07 4.16e-07 8.27e-07 2.89e-06 6.37e-07 2.07e-07 7.94e-07 8.63e-07 4.3e-07 2.72e-07 3.35e-07
ENSG00000132768 DPH2 9995 3.69e-05 3.37e-05 5.65e-06 1.55e-05 5.33e-06 1.45e-05 4.47e-05 4.69e-06 3.23e-05 1.47e-05 3.9e-05 1.72e-05 4.95e-05 1.41e-05 6.39e-06 1.79e-05 1.73e-05 2.46e-05 7.56e-06 6.57e-06 1.42e-05 3.17e-05 3.09e-05 8.4e-06 4.09e-05 7.46e-06 1.42e-05 1.28e-05 3.09e-05 2.32e-05 1.87e-05 1.61e-06 2.56e-06 6.84e-06 1.16e-05 5.52e-06 3.09e-06 3.18e-06 4.65e-06 3.35e-06 1.72e-06 3.66e-05 3.8e-06 3.43e-07 2.21e-06 3.65e-06 3.88e-06 1.6e-06 1.59e-06
ENSG00000159214 CCDC24 -11364 3.49e-05 3.3e-05 5.25e-06 1.55e-05 5.16e-06 1.42e-05 4.36e-05 4.59e-06 3.18e-05 1.44e-05 3.84e-05 1.67e-05 4.89e-05 1.38e-05 6.2e-06 1.73e-05 1.69e-05 2.41e-05 7.14e-06 6.43e-06 1.39e-05 3.03e-05 2.96e-05 7.95e-06 3.96e-05 7.14e-06 1.39e-05 1.26e-05 2.98e-05 2.23e-05 1.83e-05 1.61e-06 2.5e-06 6.8e-06 1.14e-05 5.34e-06 3.09e-06 3.13e-06 4.58e-06 3.35e-06 1.73e-06 3.56e-05 3.74e-06 3.33e-07 2.07e-06 3.51e-06 3.77e-06 1.56e-06 1.56e-06