Genes within 1Mb (chr1:43950620:CTT:C):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000117407 ARTN 17300 eQTL 1.73e-15 0.451 0.0557 0.0 0.0 0.13
ENSG00000117408 IPO13 3670 eQTL 5.93e-04 -0.0789 0.0229 0.0 0.0 0.13
ENSG00000117410 ATP6V0B -23867 eQTL 8.34e-20 -0.121 0.013 0.0 0.0 0.13
ENSG00000132768 DPH2 -19380 eQTL 1.08e-02 0.0477 0.0187 0.0 0.0 0.13
ENSG00000142949 PTPRF 425433 eQTL 9.77e-03 0.105 0.0404 0.0 0.0 0.13
ENSG00000159214 CCDC24 -40739 eQTL 2.51e-24 0.516 0.0493 0.0162 0.00546 0.13
ENSG00000178028 DMAP1 -262835 eQTL 2.46e-02 0.0659 0.0293 0.0 0.0 0.13
ENSG00000178922 HYI 496631 eQTL 1.81e-02 0.0713 0.0301 0.0013 0.0 0.13
ENSG00000187147 RNF220 -454574 eQTL 2.07e-02 0.0387 0.0167 0.0 0.0 0.13
ENSG00000222009 BTBD19 -857862 eQTL 4.28e-02 -0.0439 0.0216 0.0 0.0 0.13
ENSG00000229431 AL139289.1 565507 eQTL 2.57e-02 -0.123 0.0552 0.0 0.0 0.13
ENSG00000236200 KDM4A-AS1 242482 eQTL 4.77e-02 0.111 0.056 0.0 0.0 0.13


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000117394 \N 991444 1.27e-06 1.01e-06 1.31e-07 3.44e-07 9.45e-08 4.35e-07 1.59e-06 7.56e-08 8.61e-07 1.37e-07 1.08e-06 3.27e-07 9.1e-07 2.33e-07 1.26e-07 2.89e-07 8.28e-07 5.27e-07 1.77e-07 1.67e-07 3.5e-07 4.79e-07 4.69e-07 1.8e-07 1.66e-06 2.37e-07 6.16e-07 1.54e-07 5.16e-07 1.29e-06 4.39e-07 3.66e-08 1.32e-07 1.77e-07 3.26e-07 6.18e-08 6.24e-08 1.41e-07 6.29e-08 3.6e-08 3.98e-08 6.11e-07 3.65e-07 2.91e-07 2.64e-08 4.48e-08 1.26e-07 1.9e-09 5.04e-08
ENSG00000117407 ARTN 17300 0.00014 9.05e-05 1.65e-05 2.04e-05 8.29e-06 2.66e-05 7.63e-05 6.24e-06 5.94e-05 2.2e-05 7.69e-05 3.02e-05 0.000109 2.99e-05 1.15e-05 3.97e-05 4.22e-05 3.86e-05 1.28e-05 9.02e-06 2.71e-05 7.18e-05 6.39e-05 1.35e-05 0.000101 1.46e-05 2.52e-05 1.99e-05 6.83e-05 3.96e-05 3.63e-05 1.62e-06 2.59e-06 8.84e-06 1.79e-05 8.1e-06 3.67e-06 3.67e-06 6.28e-06 3.57e-06 1.88e-06 9.67e-05 1.2e-05 4.64e-07 5.6e-06 5.91e-06 6.34e-06 2.4e-06 1.47e-06
ENSG00000117408 IPO13 3670 0.000209 0.000186 2.01e-05 4.32e-05 1.92e-05 5.87e-05 0.000156 1.77e-05 0.000124 5.25e-05 0.000167 6.67e-05 0.000229 5.6e-05 2.28e-05 9.31e-05 6.37e-05 9.41e-05 3.08e-05 2.1e-05 5.58e-05 0.000157 0.000141 3.22e-05 0.000199 3.52e-05 6.7e-05 4.5e-05 0.000141 5.31e-05 8.52e-05 4.13e-06 7.03e-06 1.9e-05 2.72e-05 1.54e-05 5.66e-06 6.18e-06 1.26e-05 6.44e-06 3.08e-06 0.000218 1.67e-05 4.6e-07 9e-06 1.49e-05 1.66e-05 4.93e-06 4.19e-06
ENSG00000117410 ATP6V0B -23867 0.00012 7.49e-05 1.52e-05 1.72e-05 6.9e-06 2.15e-05 6.15e-05 4.46e-06 4.72e-05 1.77e-05 5.76e-05 2.34e-05 8.36e-05 2.44e-05 9.71e-06 2.97e-05 3.64e-05 3.03e-05 1.01e-05 7.8e-06 2.21e-05 5.47e-05 5.12e-05 1.14e-05 8.19e-05 1.12e-05 2.09e-05 1.61e-05 5.37e-05 3.48e-05 2.84e-05 1.59e-06 2.35e-06 8.31e-06 1.61e-05 7.51e-06 3.19e-06 3.21e-06 5.2e-06 2.92e-06 1.77e-06 8.5e-05 1.05e-05 4.21e-07 4.5e-06 4.93e-06 4.82e-06 1.72e-06 1.53e-06
ENSG00000117419 \N -404640 4e-06 3.29e-06 2.99e-07 1.28e-06 3.86e-07 7.26e-07 2.98e-06 3.68e-07 1.65e-06 3.71e-07 1.79e-06 7.37e-07 2.64e-06 9.92e-07 5.17e-07 9.55e-07 1.85e-06 1.92e-06 7.98e-07 6.26e-07 1.62e-06 1.93e-06 1.56e-06 9.78e-07 2.87e-06 1.07e-06 1.31e-06 6e-07 1.67e-06 3e-06 7.53e-07 6.42e-08 6.49e-07 8.37e-07 1.02e-06 4.32e-07 4.92e-07 4.48e-07 1.24e-07 2.68e-08 2.81e-08 1.8e-06 2.67e-06 2.81e-07 1.84e-07 3.02e-07 4.15e-07 3.21e-08 4.52e-08
ENSG00000126091 \N 244796 6.97e-06 5.79e-06 6.27e-07 1.97e-06 8.52e-07 2.09e-06 9.06e-06 6.98e-07 4.93e-06 1e-06 4.16e-06 1.69e-06 5.88e-06 2.22e-06 8.93e-07 2.07e-06 3.87e-06 3.19e-06 1.61e-06 1.18e-06 3.2e-06 4.05e-06 3.67e-06 1.62e-06 5.89e-06 1.85e-06 2.55e-06 1.07e-06 4.26e-06 6.08e-06 1.96e-06 3e-07 7.99e-07 1.76e-06 2.09e-06 8.93e-07 7.33e-07 6.18e-07 4.94e-07 3.01e-07 1.91e-07 4.15e-06 4.6e-06 3.66e-07 3.04e-07 3.67e-07 1.13e-06 2.65e-07 1.16e-07
ENSG00000159214 CCDC24 -40739 9.54e-05 5.57e-05 1.09e-05 1.55e-05 3.64e-06 1.83e-05 4.7e-05 3.1e-06 2.98e-05 1.2e-05 3.52e-05 1.2e-05 5e-05 1.67e-05 7.05e-06 1.61e-05 2.58e-05 1.97e-05 6.32e-06 5.57e-06 1.46e-05 3.13e-05 3.71e-05 8.69e-06 5.79e-05 7.46e-06 1.3e-05 1.1e-05 3.79e-05 2.61e-05 1.83e-05 1.17e-06 2.23e-06 7.77e-06 1.36e-05 5.11e-06 2.42e-06 2.96e-06 3.63e-06 1.4e-06 1.72e-06 6.49e-05 6.26e-06 4.43e-07 3.13e-06 3.07e-06 3.74e-06 1.22e-06 1.08e-06