Genes within 1Mb (chr1:43900945:C:T):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000117407 ARTN -32375 eQTL 1.40e-34 -0.464 0.0363 0.00263 0.00271 0.482
ENSG00000117408 IPO13 -46005 eQTL 2.80e-03 -0.0468 0.0156 0.0 0.0 0.482
ENSG00000117410 ATP6V0B -73542 eQTL 3.44e-04 -0.033 0.00918 0.0 0.0 0.482
ENSG00000117411 B4GALT2 -77998 eQTL 4.23e-02 -0.0506 0.0249 0.0 0.0 0.482
ENSG00000132768 DPH2 -69055 eQTL 9.21e-04 -0.0423 0.0127 0.00139 0.00171 0.482
ENSG00000159214 CCDC24 -90414 eQTL 2.71e-142 -0.769 0.0253 0.0 0.0 0.482
ENSG00000159479 MED8 511137 eQTL 3.63e-03 -0.0372 0.0127 0.0 0.0 0.482
ENSG00000178922 HYI 446956 eQTL 1.14e-04 -0.0792 0.0204 0.0 0.0 0.482
ENSG00000187147 RNF220 -504249 eQTL 3.06e-02 -0.0247 0.0114 0.0 0.0 0.482
ENSG00000236200 KDM4A-AS1 192807 eQTL 5.31e-03 -0.106 0.0381 0.0 0.0 0.482


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000117407 ARTN -32375 1.25e-05 1.33e-05 2.98e-06 9.4e-06 3.1e-06 6.99e-06 2.07e-05 3.09e-06 1.45e-05 7.28e-06 1.84e-05 7.34e-06 2.69e-05 5.81e-06 4.49e-06 9.28e-06 8.14e-06 1.29e-05 4.82e-06 4.75e-06 8.39e-06 1.41e-05 1.49e-05 6.4e-06 2.58e-05 5.33e-06 7.54e-06 6.92e-06 1.69e-05 1.97e-05 1e-05 1.47e-06 2e-06 5.89e-06 6.94e-06 4.5e-06 2.77e-06 2.74e-06 3.71e-06 2.79e-06 1.67e-06 1.86e-05 2.45e-06 4.37e-07 2e-06 2.79e-06 3.07e-06 1.5e-06 1.32e-06
ENSG00000117408 IPO13 -46005 9.86e-06 1.04e-05 2.38e-06 6.84e-06 2.4e-06 5.46e-06 1.34e-05 2.18e-06 1.05e-05 5.41e-06 1.39e-05 6.14e-06 1.86e-05 4.06e-06 3.49e-06 6.93e-06 6.1e-06 9.66e-06 3.65e-06 3.61e-06 6.47e-06 1.08e-05 1.03e-05 4.71e-06 1.93e-05 4.72e-06 6.35e-06 5.08e-06 1.34e-05 1.35e-05 6.63e-06 9.57e-07 1.4e-06 4.09e-06 5.39e-06 3.58e-06 1.81e-06 2.37e-06 2.8e-06 1.96e-06 1.63e-06 1.4e-05 1.61e-06 3.62e-07 1.44e-06 2.12e-06 2.08e-06 8.41e-07 8.01e-07
ENSG00000117410 ATP6V0B -73542 6.69e-06 7.85e-06 1.22e-06 4.11e-06 2.35e-06 3.53e-06 9.63e-06 1.69e-06 6.1e-06 4.42e-06 9.18e-06 4.44e-06 1.15e-05 3.87e-06 1.73e-06 5.65e-06 3.69e-06 5.05e-06 2.65e-06 2.79e-06 4.67e-06 7.46e-06 6.75e-06 3.36e-06 1.19e-05 3.09e-06 4.19e-06 3.07e-06 8.01e-06 7.86e-06 4.11e-06 9.42e-07 1.25e-06 3.31e-06 3.19e-06 2.53e-06 1.83e-06 1.84e-06 2.11e-06 9.68e-07 1.1e-06 9.19e-06 1.14e-06 2.22e-07 8.32e-07 1.49e-06 1.28e-06 7.99e-07 4.39e-07
ENSG00000132768 DPH2 -69055 7.08e-06 8.81e-06 1.31e-06 4.36e-06 2.38e-06 3.93e-06 9.59e-06 1.76e-06 6.77e-06 4.28e-06 1.03e-05 4.77e-06 1.22e-05 3.91e-06 2.07e-06 6.1e-06 3.84e-06 5.77e-06 2.65e-06 2.94e-06 4.74e-06 7.77e-06 6.94e-06 3.24e-06 1.25e-05 3.35e-06 4.38e-06 3.29e-06 8.51e-06 8.22e-06 4.33e-06 9.62e-07 1.21e-06 3.29e-06 3.62e-06 2.67e-06 1.83e-06 2e-06 2.16e-06 1.04e-06 1.14e-06 1e-05 1.34e-06 2.5e-07 7.99e-07 1.67e-06 1.4e-06 7.15e-07 4.72e-07
ENSG00000142945 \N -838873 3.02e-07 1.5e-07 5.91e-08 2.07e-07 1.02e-07 8.45e-08 2.1e-07 5.82e-08 1.71e-07 9.35e-08 1.66e-07 1.23e-07 2.24e-07 8.13e-08 5.36e-08 9.01e-08 4.18e-08 1.77e-07 7.09e-08 5.33e-08 1.22e-07 1.47e-07 1.58e-07 3.58e-08 2.09e-07 1.31e-07 1.19e-07 1.1e-07 1.32e-07 1.05e-07 1.14e-07 3.93e-08 3.29e-08 9.81e-08 3.12e-08 2.74e-08 5.51e-08 9.03e-08 6.41e-08 5.13e-08 5.71e-08 1.59e-07 5.39e-08 7.51e-09 2.64e-08 1.68e-08 8.74e-08 1.91e-09 4.85e-08
ENSG00000159214 CCDC24 -90414 5.65e-06 5.68e-06 7.77e-07 3.49e-06 1.88e-06 2.02e-06 8.57e-06 1.29e-06 4.76e-06 3.17e-06 7.7e-06 3.01e-06 1.02e-05 2.39e-06 9.95e-07 4.63e-06 2.92e-06 3.79e-06 2.15e-06 2.26e-06 3.25e-06 6.71e-06 5.12e-06 2.56e-06 9.14e-06 2.38e-06 3.1e-06 2.13e-06 6.74e-06 7.69e-06 3.29e-06 5.5e-07 8.38e-07 2.82e-06 2.22e-06 2.09e-06 1.56e-06 1.09e-06 1.42e-06 8.89e-07 9.75e-07 8.39e-06 6.52e-07 1.73e-07 7.62e-07 8.35e-07 9.03e-07 6.61e-07 5.6e-07
ENSG00000178922 HYI 446956 1.11e-06 6.97e-07 1.6e-07 4.35e-07 1.14e-07 3.15e-07 6.51e-07 2.62e-07 7.56e-07 3.12e-07 1.08e-06 5.28e-07 1.1e-06 1.72e-07 3.58e-07 4.19e-07 5.41e-07 4.4e-07 2.92e-07 2.63e-07 2.57e-07 5.34e-07 4.66e-07 3.21e-07 1.38e-06 2.52e-07 4.55e-07 3.89e-07 6.19e-07 8.4e-07 4.08e-07 5.93e-08 6.78e-08 2.29e-07 3.63e-07 1.94e-07 1.64e-07 1.02e-07 8.06e-08 8.72e-09 1.22e-07 7.54e-07 5.38e-08 5.8e-09 2.03e-07 2.68e-08 1.37e-07 2.44e-08 6.12e-08