Genes within 1Mb (chr1:43851610:C:T):

View on , UCSC , GTEx , gnomAD


Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000066135 KDM4A 201461 sc-eQTL 8.09e-01 0.0619 0.256 0.052 gdT L2
ENSG00000066322 ELOVL1 483536 sc-eQTL 9.99e-01 -0.00043 0.251 0.052 gdT L2
ENSG00000117394 SLC2A1 892742 sc-eQTL 9.20e-01 -0.0217 0.216 0.052 gdT L2
ENSG00000117395 EBNA1BP2 580674 sc-eQTL 7.55e-01 0.0788 0.252 0.052 gdT L2
ENSG00000117399 CDC20 492629 sc-eQTL 9.38e-01 -0.0133 0.17 0.052 gdT L2
ENSG00000117408 IPO13 -95340 sc-eQTL 6.50e-02 0.437 0.235 0.052 gdT L2
ENSG00000117410 ATP6V0B -122877 sc-eQTL 7.62e-02 -0.382 0.214 0.052 gdT L2
ENSG00000117411 B4GALT2 -127333 sc-eQTL 6.61e-01 0.0981 0.223 0.052 gdT L2
ENSG00000117419 ERI3 -503650 sc-eQTL 5.69e-01 0.15 0.262 0.052 gdT L2
ENSG00000126091 ST3GAL3 145786 sc-eQTL 1.32e-01 -0.362 0.239 0.052 gdT L2
ENSG00000126106 TMEM53 -822871 sc-eQTL 8.79e-01 -0.0344 0.225 0.052 gdT L2
ENSG00000132768 DPH2 -118390 sc-eQTL 6.14e-01 0.12 0.236 0.052 gdT L2
ENSG00000142937 RPS8 -923641 sc-eQTL 8.55e-01 0.0173 0.0948 0.052 gdT L2
ENSG00000142945 KIF2C -888208 sc-eQTL 9.95e-01 0.000835 0.14 0.052 gdT L2
ENSG00000159479 MED8 461802 sc-eQTL 2.79e-01 -0.258 0.238 0.052 gdT L2
ENSG00000173846 PLK3 -948767 sc-eQTL 3.27e-01 0.157 0.16 0.052 gdT L2
ENSG00000178028 DMAP1 -361845 sc-eQTL 1.29e-02 0.591 0.235 0.052 gdT L2
ENSG00000178922 HYI 397621 sc-eQTL 3.45e-01 0.234 0.247 0.052 gdT L2
ENSG00000187147 RNF220 -553584 sc-eQTL 3.60e-02 0.414 0.196 0.052 gdT L2
ENSG00000198198 SZT2 461728 sc-eQTL 8.78e-01 -0.0349 0.227 0.052 gdT L2
ENSG00000198520 ARMH1 -823082 sc-eQTL 4.82e-01 0.153 0.216 0.052 gdT L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000159214 CCDC24 -139749 eQTL 1.49e-08 -0.533 0.0933 0.0 0.0 0.0363
ENSG00000178028 DMAP1 -361845 eQTL 0.000272 0.194 0.0531 0.0 0.0 0.0363


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000066056 \N 550628 1.31e-06 9.33e-07 2.62e-07 3.96e-07 1.07e-07 3.69e-07 7.32e-07 2.04e-07 7.15e-07 2.81e-07 1.26e-06 5.28e-07 1.15e-06 2.55e-07 4.39e-07 3.68e-07 6.29e-07 4.72e-07 3.48e-07 2.63e-07 2.62e-07 9.14e-07 5.41e-07 3.24e-07 1.54e-06 2.71e-07 5.56e-07 5.33e-07 6.19e-07 8.38e-07 4.47e-07 3.7e-08 4.77e-08 2.15e-07 3.69e-07 1.85e-07 3.81e-07 1.07e-07 1.01e-07 1.83e-08 8.61e-08 1.59e-06 1.22e-07 8.98e-08 1.23e-07 7.16e-08 1.18e-07 2.99e-09 5.65e-08
ENSG00000117425 \N -991643 3.14e-07 2.56e-07 6.42e-08 2.35e-07 1.05e-07 7.75e-08 2.16e-07 5.85e-08 1.44e-07 6.4e-08 1.96e-07 1.15e-07 2.05e-07 8.54e-08 6.27e-08 7.89e-08 4.18e-08 1.72e-07 7.42e-08 5.87e-08 1.26e-07 1.81e-07 1.64e-07 3.68e-08 2.09e-07 1.22e-07 1.23e-07 1.44e-07 1.31e-07 1.06e-07 1.09e-07 4.85e-08 3.21e-08 9.58e-08 3.51e-08 2.85e-08 6.39e-08 8.89e-08 6.33e-08 6.92e-08 5.42e-08 2.43e-07 1.21e-08 1.05e-08 3.07e-08 9.86e-09 8.81e-08 1.88e-09 4.99e-08
ENSG00000159214 CCDC24 -139749 7.25e-06 1.04e-05 1.37e-06 4.96e-06 1.5e-06 4.02e-06 9.65e-06 1.51e-06 7.74e-06 4.43e-06 1.15e-05 4.77e-06 1.24e-05 3.81e-06 1.86e-06 5.73e-06 3.68e-06 3.89e-06 1.63e-06 2.02e-06 3.42e-06 8.85e-06 5.93e-06 1.95e-06 1.29e-05 2.19e-06 4.51e-06 2.62e-06 7.11e-06 7.66e-06 4.54e-06 5.84e-07 5.38e-07 2.61e-06 3.53e-06 1.33e-06 1.07e-06 5.45e-07 1.38e-06 7.42e-07 6.06e-07 1.3e-05 1.03e-06 1.52e-07 4.38e-07 1.17e-06 9.61e-07 4.43e-07 4.83e-07
ENSG00000178028 DMAP1 -361845 1.54e-06 2.56e-06 2.72e-07 1.44e-06 3.69e-07 6.91e-07 1.27e-06 4.35e-07 1.73e-06 5.86e-07 1.9e-06 1.18e-06 2.58e-06 9.7e-07 3.68e-07 9.9e-07 1.14e-06 1.08e-06 6.79e-07 5.21e-07 7.54e-07 1.99e-06 1.19e-06 5.67e-07 2.51e-06 6.73e-07 1.04e-06 1.06e-06 1.63e-06 1.31e-06 7.35e-07 2.45e-07 2.53e-07 5.73e-07 5.52e-07 4.8e-07 7.42e-07 2.46e-07 5.13e-07 2.93e-07 3e-07 3.35e-06 5.58e-07 1.81e-07 1.93e-07 3.24e-07 2.43e-07 8.88e-08 1.04e-07