Genes within 1Mb (chr1:43832878:C:T):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000117407 ARTN -100442 eQTL 4.25e-19 0.467 0.0512 0.0123 0.0114 0.151
ENSG00000117408 IPO13 -114072 eQTL 2.80e-03 -0.0636 0.0212 0.0 0.0 0.151
ENSG00000117410 ATP6V0B -141609 eQTL 1.08e-19 -0.111 0.012 0.0 0.0 0.151
ENSG00000126091 ST3GAL3 127054 eQTL 1.54e-02 0.0493 0.0203 0.0 0.0 0.151
ENSG00000132768 DPH2 -137122 eQTL 2.68e-02 0.0384 0.0173 0.0 0.0 0.151
ENSG00000142949 PTPRF 307691 pQTL 1.73e-02 0.0827 0.0347 0.0 0.0 0.151
ENSG00000142949 PTPRF 307691 eQTL 2.07e-02 0.0867 0.0374 0.0 0.0 0.151
ENSG00000159214 CCDC24 -158481 eQTL 2.57e-15 0.375 0.0467 0.0 0.0 0.151
ENSG00000178028 DMAP1 -380577 eQTL 6.70e-04 0.0922 0.027 0.0 0.0 0.151
ENSG00000187147 RNF220 -572316 eQTL 8.75e-03 0.0406 0.0154 0.00105 0.0 0.151
ENSG00000227533 SLC2A1-AS1 873829 eQTL 2.07e-02 -0.122 0.0527 0.0 0.0 0.151
ENSG00000229431 AL139289.1 447765 eQTL 3.41e-02 -0.108 0.0511 0.0 0.0 0.151
ENSG00000236200 KDM4A-AS1 124740 eQTL 2.42e-02 0.117 0.0518 0.0 0.0 0.151


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000117394 \N 873702 2.67e-07 1.3e-07 5.14e-08 1.81e-07 9.16e-08 9.9e-08 1.61e-07 5.43e-08 1.45e-07 4.94e-08 1.55e-07 9e-08 1.52e-07 6.76e-08 6.04e-08 7.36e-08 4.09e-08 1.27e-07 5.75e-08 4.1e-08 1.19e-07 1.24e-07 1.44e-07 3.03e-08 1.5e-07 1.21e-07 1.07e-07 9.65e-08 1.16e-07 1.07e-07 9.92e-08 3.66e-08 3.56e-08 8.25e-08 7.51e-08 3.65e-08 4.95e-08 9.26e-08 6.55e-08 3.71e-08 4.88e-08 1.4e-07 5.27e-08 1.18e-08 4.92e-08 1.83e-08 1.19e-07 3.8e-09 4.88e-08
ENSG00000117407 ARTN -100442 4.7e-06 4.99e-06 8.35e-07 2.94e-06 1.66e-06 1.66e-06 5.27e-06 9.6e-07 5.09e-06 2.43e-06 5.73e-06 3.34e-06 7.51e-06 2.29e-06 1.43e-06 3.38e-06 1.82e-06 3.79e-06 1.47e-06 1.14e-06 2.93e-06 4.93e-06 4.57e-06 1.35e-06 7.21e-06 1.95e-06 2.57e-06 1.75e-06 4.47e-06 5.02e-06 2.77e-06 5.25e-07 5.47e-07 1.59e-06 2.24e-06 1.14e-06 1.02e-06 4.58e-07 8.12e-07 3.71e-07 5.19e-07 5.98e-06 3.83e-07 1.55e-07 6.11e-07 5.86e-07 9.64e-07 4.26e-07 3.24e-07
ENSG00000117408 IPO13 -114072 4.49e-06 4.77e-06 7.87e-07 2.43e-06 1.2e-06 1.39e-06 4.07e-06 9.52e-07 4.57e-06 2.01e-06 4.86e-06 3.46e-06 7.26e-06 2.04e-06 1.38e-06 2.69e-06 2e-06 3.09e-06 1.33e-06 9.87e-07 2.35e-06 4.42e-06 3.67e-06 1.62e-06 5.44e-06 1.48e-06 2.27e-06 1.48e-06 4.36e-06 4.26e-06 2.53e-06 5.93e-07 7.92e-07 1.86e-06 2.08e-06 9.6e-07 9.36e-07 5.28e-07 1.04e-06 4.16e-07 4.42e-07 5.69e-06 3.98e-07 1.58e-07 3.43e-07 3.21e-07 7.44e-07 2.26e-07 2.69e-07
ENSG00000117410 ATP6V0B -141609 4e-06 3.66e-06 5.15e-07 1.96e-06 8e-07 8.19e-07 2.5e-06 8.31e-07 2.51e-06 1.31e-06 3.27e-06 1.91e-06 5.54e-06 1.41e-06 8.98e-07 2.06e-06 1.55e-06 2.11e-06 1.59e-06 1.17e-06 1.4e-06 3.38e-06 3.35e-06 1.62e-06 4.54e-06 1.23e-06 1.49e-06 1.75e-06 3.52e-06 3.32e-06 1.99e-06 3.82e-07 6.01e-07 1.42e-06 1.67e-06 9.86e-07 8.9e-07 3.79e-07 1.25e-06 3.64e-07 2.4e-07 4.15e-06 5.97e-07 1.81e-07 3.13e-07 3.14e-07 8.93e-07 1.83e-07 2.06e-07
ENSG00000117419 \N -522382 5.74e-07 2.89e-07 7.97e-08 2.62e-07 1.07e-07 1.32e-07 3.7e-07 8.11e-08 2.53e-07 1.39e-07 3.32e-07 2.11e-07 4.54e-07 8.26e-08 9.33e-08 1.39e-07 1.18e-07 2.9e-07 9.69e-08 8.1e-08 1.39e-07 2.45e-07 2.33e-07 7.22e-08 4.27e-07 2e-07 1.72e-07 1.52e-07 2.03e-07 2.59e-07 1.86e-07 5.3e-08 4.98e-08 1.02e-07 1.22e-07 5.32e-08 6.39e-08 5.71e-08 4.9e-08 7.9e-08 4.84e-08 2.9e-07 3.26e-08 1.85e-08 6.21e-08 9.65e-09 9.34e-08 0.0 4.68e-08
ENSG00000126091 ST3GAL3 127054 4.17e-06 4.19e-06 6.52e-07 1.8e-06 8.7e-07 1.03e-06 3e-06 1.01e-06 3.19e-06 1.6e-06 4.34e-06 2.74e-06 6.75e-06 1.35e-06 9.71e-07 2.23e-06 1.81e-06 2.75e-06 1.42e-06 8.79e-07 1.81e-06 3.98e-06 3.53e-06 1.87e-06 4.9e-06 1.29e-06 1.84e-06 1.63e-06 4.08e-06 4.12e-06 2.01e-06 4.55e-07 7.71e-07 1.74e-06 1.81e-06 8.71e-07 9.7e-07 4.88e-07 1.34e-06 3.82e-07 2.79e-07 4.84e-06 4.6e-07 1.8e-07 4.13e-07 3.61e-07 7.84e-07 2.35e-07 1.59e-07
ENSG00000142949 PTPRF 307691 1.34e-06 9.07e-07 2.77e-07 5.11e-07 2.14e-07 4.39e-07 1.15e-06 3.33e-07 1.11e-06 3.85e-07 1.38e-06 6.19e-07 1.75e-06 2.54e-07 4.53e-07 6.7e-07 8.26e-07 5.8e-07 4.65e-07 4.95e-07 3.35e-07 1.05e-06 7.96e-07 5.76e-07 1.98e-06 3.06e-07 6.21e-07 5.31e-07 1.01e-06 1.18e-06 5.47e-07 3.86e-08 1.7e-07 4.51e-07 4.08e-07 3.95e-07 3.65e-07 1.56e-07 1.71e-07 4.23e-08 2.37e-07 1.51e-06 6.64e-08 5.68e-08 1.62e-07 5.94e-08 1.9e-07 8.74e-08 5.77e-08
ENSG00000159214 CCDC24 -158481 3.21e-06 2.7e-06 3.27e-07 2.03e-06 5.29e-07 8.06e-07 2.24e-06 6.87e-07 2.06e-06 9.75e-07 2.56e-06 1.44e-06 4.01e-06 1.39e-06 9.5e-07 1.69e-06 1.48e-06 2.25e-06 1.15e-06 1.36e-06 1.14e-06 3.09e-06 2.68e-06 1.17e-06 3.97e-06 1.13e-06 1.31e-06 1.6e-06 2.57e-06 2.55e-06 1.96e-06 3.22e-07 5.2e-07 1.25e-06 1.27e-06 9.87e-07 7.5e-07 4.39e-07 1.2e-06 3.78e-07 1.52e-07 4.08e-06 4.85e-07 1.87e-07 2.99e-07 3.21e-07 7.4e-07 2.25e-07 2.29e-07
ENSG00000178028 DMAP1 -380577 1.21e-06 7.56e-07 1.57e-07 4.36e-07 1.05e-07 3.08e-07 6.52e-07 2e-07 6.52e-07 2.98e-07 1.04e-06 5.15e-07 1.05e-06 1.59e-07 3.15e-07 3.4e-07 5.63e-07 4.39e-07 2.79e-07 1.78e-07 2.38e-07 5.37e-07 4.59e-07 2.71e-07 1.35e-06 2.49e-07 4.16e-07 2.83e-07 5.43e-07 8.38e-07 3.95e-07 5.88e-08 5.86e-08 1.77e-07 3.47e-07 1.52e-07 1.31e-07 1.06e-07 7.99e-08 2.28e-08 1.03e-07 8.03e-07 4.65e-08 1.27e-08 1.69e-07 1.31e-08 1.19e-07 2.35e-08 6.15e-08