Genes within 1Mb (chr1:43462206:A:G):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000066056 TIE1 161224 pQTL 4.56e-04 -0.142 0.0405 0.0 0.0 0.134
ENSG00000117399 CDC20 103225 eQTL 1.54e-03 -0.0586 0.0185 0.00216 0.00159 0.138
ENSG00000159214 CCDC24 -529153 eQTL 8.73e-03 0.128 0.0489 0.0 0.0 0.138
ENSG00000159479 MED8 72398 eQTL 5.68e-22 -0.166 0.0168 0.0116 0.0138 0.138
ENSG00000164010 ERMAP 645084 pQTL 3.45e-02 0.067 0.0316 0.0 0.0 0.134
ENSG00000177868 SVBP 644809 eQTL 1.14e-02 -0.0689 0.0272 0.00271 0.0 0.138
ENSG00000178922 HYI 8217 eQTL 2.29e-10 -0.178 0.0278 0.0 0.0 0.138
ENSG00000198198 SZT2 72324 eQTL 3.93e-02 0.0336 0.0163 0.00109 0.0 0.138
ENSG00000229431 AL139289.1 77093 eQTL 1.15e-05 -0.227 0.0516 0.0124 0.012 0.138
ENSG00000234694 AL139289.2 103548 eQTL 2.31e-02 -0.127 0.0558 0.00156 0.0 0.138


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000117407 \N -471114 5.59e-07 3.47e-07 6.86e-08 3.48e-07 1.05e-07 1.57e-07 3.94e-07 7.65e-08 2.53e-07 1.5e-07 3.47e-07 1.96e-07 5.39e-07 1.01e-07 1.12e-07 1.14e-07 1.01e-07 2.9e-07 9.71e-08 7.49e-08 1.48e-07 2.3e-07 2.48e-07 7.36e-08 4.46e-07 1.94e-07 1.37e-07 1.69e-07 2.03e-07 2.89e-07 1.93e-07 6.68e-08 5.64e-08 1.21e-07 1.95e-07 5.23e-08 8.07e-08 5.53e-08 5.89e-08 7.77e-08 4.46e-08 3.66e-07 3.18e-08 2.03e-08 4.99e-08 8.76e-09 7.8e-08 0.0 4.59e-08
ENSG00000159214 CCDC24 -529153 3.71e-07 2.5e-07 5.91e-08 2.58e-07 1.1e-07 1.19e-07 2.95e-07 5.84e-08 1.94e-07 1.11e-07 2.18e-07 1.48e-07 3.6e-07 8.42e-08 6.93e-08 9.6e-08 6.63e-08 2.21e-07 7.11e-08 6.16e-08 1.33e-07 1.9e-07 1.86e-07 3.67e-08 2.99e-07 1.56e-07 1.23e-07 1.44e-07 1.44e-07 1.81e-07 1.52e-07 4.29e-08 4.76e-08 9.09e-08 9.25e-08 3.57e-08 5.71e-08 7.1e-08 5.27e-08 7.65e-08 4.36e-08 2.6e-07 4.83e-08 7.26e-09 3.87e-08 9.44e-09 8.67e-08 2.2e-09 4.83e-08
ENSG00000159479 MED8 72398 5.68e-06 7.87e-06 6.65e-07 3.51e-06 1.71e-06 1.98e-06 8.29e-06 1.15e-06 4.65e-06 3.06e-06 8.1e-06 2.88e-06 1.06e-05 2.7e-06 1.01e-06 3.97e-06 3.13e-06 3.93e-06 1.65e-06 1.48e-06 2.77e-06 6.28e-06 4.86e-06 1.93e-06 9.55e-06 2.15e-06 2.24e-06 1.76e-06 6.07e-06 7.35e-06 3.43e-06 4.17e-07 7.57e-07 2.22e-06 1.99e-06 1.26e-06 9.95e-07 4.66e-07 9.82e-07 6.22e-07 4.63e-07 8.21e-06 4.91e-07 1.59e-07 5.01e-07 1.17e-06 1.13e-06 5.36e-07 3.26e-07
ENSG00000178922 HYI 8217 2.17e-05 2.54e-05 4.87e-06 1.32e-05 4.08e-06 1.13e-05 3.43e-05 3.72e-06 2.22e-05 1.13e-05 2.96e-05 1.19e-05 3.98e-05 1.08e-05 5.88e-06 1.32e-05 1.4e-05 1.93e-05 7.14e-06 5.52e-06 1.12e-05 2.43e-05 2.41e-05 7.87e-06 3.59e-05 5.96e-06 9.54e-06 9.46e-06 2.67e-05 2.57e-05 1.51e-05 1.6e-06 2.43e-06 6.44e-06 9.49e-06 5.23e-06 2.83e-06 2.99e-06 4.29e-06 3.19e-06 1.66e-06 3.02e-05 2.72e-06 3.55e-07 2.11e-06 3.1e-06 3.49e-06 1.42e-06 1.36e-06
ENSG00000229431 AL139289.1 77093 5.64e-06 7.17e-06 7.3e-07 3.39e-06 1.59e-06 1.59e-06 7.57e-06 1.09e-06 4.71e-06 2.81e-06 7.76e-06 3.18e-06 1.01e-05 2.19e-06 9.3e-07 3.72e-06 2.96e-06 3.87e-06 1.52e-06 1.38e-06 2.77e-06 5.51e-06 4.72e-06 1.84e-06 9e-06 1.99e-06 2.33e-06 1.71e-06 5.6e-06 6.7e-06 3.32e-06 4.19e-07 7.34e-07 2.07e-06 2.03e-06 1.17e-06 1.07e-06 4.71e-07 9.49e-07 5.64e-07 4.41e-07 8.58e-06 4.01e-07 1.63e-07 4.54e-07 1.28e-06 9.75e-07 4.43e-07 3.24e-07
ENSG00000234694 AL139289.2 103548 4.68e-06 5e-06 7.57e-07 2.89e-06 1.08e-06 1.69e-06 4.27e-06 9.52e-07 4.8e-06 2.11e-06 5.29e-06 3.46e-06 7.38e-06 2.33e-06 1.35e-06 2.54e-06 1.9e-06 2.9e-06 1.43e-06 9.89e-07 2.29e-06 4.49e-06 3.78e-06 1.6e-06 6.5e-06 1.32e-06 2.15e-06 1.79e-06 4.21e-06 4.28e-06 2.75e-06 5.93e-07 7.32e-07 1.89e-06 2.16e-06 1.02e-06 9.82e-07 4.59e-07 1.06e-06 3.63e-07 2.4e-07 5.67e-06 4.65e-07 1.8e-07 3.45e-07 3.93e-07 8e-07 2.08e-07 1.58e-07